mRNA_H-elongata_contig87783.16309.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig87783.16309.1 vs. uniprot
Match: A0A835YV88_9STRA (Flavoprotein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV88_9STRA) HSP 1 Score: 176 bits (445), Expect = 1.600e-53 Identity = 79/120 (65.83%), Postives = 100/120 (83.33%), Query Frame = 1
Query: 4 VKIIVTEASKHFMDRSRVYDPQAHAAFTSLDPPVMVLDDSEEWGAWNAIGDPVLHIELRDWADMILVAPLSANTLGKLANGLCDNLLTCVARAWDFENKKPFVVAPAMNTHMWRHPMTDR 363
VKIIVT+AS+ F+D +R YD ++ A+++L+PP+ VL D EWG W+ +GDPV H++LR+WAD++L+APLSANTLGKLANGLCDNLLTCVARAWD KP +VAPAMNTHMW HP+T R
Sbjct: 42 VKIIVTKASRAFLDCARDYDRPSYDAWSALEPPMEVLADEGEWGMWSKVGDPVQHVQLREWADLLLIAPLSANTLGKLANGLCDNLLTCVARAWDVT--KPLIVAPAMNTHMWSHPLTAR 159
BLAST of mRNA_H-elongata_contig87783.16309.1 vs. uniprot
Match: A0A4D9D302_9STRA (Flavoprotein domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D302_9STRA) HSP 1 Score: 168 bits (426), Expect = 1.650e-50 Identity = 74/119 (62.18%), Postives = 98/119 (82.35%), Query Frame = 1
Query: 1 QVKIIVTEASKHFMDRSRVYDPQAHAAFTSLDPPVMVLDDSEEWGAWNAIGDPVLHIELRDWADMILVAPLSANTLGKLANGLCDNLLTCVARAWDFENKKPFVVAPAMNTHMWRHPMT 357
+VK+ +T+A++HF + ++VY+P A A+F L V VL+D EW AWNA+GDPVLHI+LRDWAD++L+APLSANTLGKLA+GLCDNL+T + RAWD + +KP ++APAMNTHMW HP T
Sbjct: 41 EVKVALTKAARHFWECAKVYNPAAWASFQELGGRVEVLEDKNEWDAWNAMGDPVLHIQLRDWADLLLIAPLSANTLGKLAHGLCDNLVTSIVRAWDVK-RKPVLLAPAMNTHMWEHPFT 158
BLAST of mRNA_H-elongata_contig87783.16309.1 vs. uniprot
Match: W4GS25_9STRA (Flavoprotein domain-containing protein n=11 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GS25_9STRA) HSP 1 Score: 161 bits (407), Expect = 2.710e-46 Identity = 71/119 (59.66%), Postives = 95/119 (79.83%), Query Frame = 1
Query: 4 VKIIVTEASKHFMDRSRVYDPQAHAAFTSLDPPVMVLDDSEEWGAWNAIGDPVLHIELRDWADMILVAPLSANTLGKLANGLCDNLLTCVARAWDFENKKPFVVAPAMNTHMWRHPMTD 360
V+++VT+A++ F+D++ YDP+AHAAF +L P+ L D +EW AW+++GDPVLHI LRDWAD++ +APLSANT+ KLA GLCDNL+TCVARAW KP +VAPAMNT M+ HP T+
Sbjct: 164 VRVVVTKAAQFFLDKAATYDPEAHAAFIALSLPI--LRDDDEWNAWSSLGDPVLHIHLRDWADVMCIAPLSANTMAKLAGGLCDNLVTCVARAWS--TAKPLIVAPAMNTQMYAHPATE 278
BLAST of mRNA_H-elongata_contig87783.16309.1 vs. uniprot
Match: K3WBB5_GLOUD (Flavoprotein domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WBB5_GLOUD) HSP 1 Score: 153 bits (386), Expect = 9.340e-45 Identity = 69/121 (57.02%), Postives = 90/121 (74.38%), Query Frame = 1
Query: 1 QVKIIVTEASKHFMDRSRVYDPQAHAAFTSLDPPVMVLDDSEEWGAWNAIGDPVLHIELRDWADMILVAPLSANTLGKLANGLCDNLLTCVARAWDFENKKPFVVAPAMNTHMWRHPMTDR 363
+VK++VT+A F+ + Y+P A AFT+ P+ V+ D EW AW +GD VLHIEL+DWAD++L+AP+SANTL K+ANGL DNLLTC+ARAW+ +K FV APAMNT MW HP+T R
Sbjct: 39 EVKLVVTKAGDFFLQKVSEYNPSAWGAFTARAEPIEVIRDEHEWDAWRVVGDSVLHIELKDWADVLLLAPMSANTLAKIANGLSDNLLTCIARAWNV--RKSFVYAPAMNTDMWDHPVTAR 157
BLAST of mRNA_H-elongata_contig87783.16309.1 vs. uniprot
Match: A0A067CM62_SAPPC (Flavoprotein domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CM62_SAPPC) HSP 1 Score: 152 bits (385), Expect = 1.210e-44 Identity = 68/121 (56.20%), Postives = 92/121 (76.03%), Query Frame = 1
Query: 1 QVKIIVTEASKHFMDRSRVYDPQAHAAFTSLDPPVMVLDDSEEWGAWNAIGDPVLHIELRDWADMILVAPLSANTLGKLANGLCDNLLTCVARAWDFENKKPFVVAPAMNTHMWRHPMTDR 363
+V++++T+++ F+ ++ Y+P AAF +L+ V + D +EW AWN IGDP+LHI+LRDWAD+ +VAPLSAN++ KLANGLCDNLLTCVARAW KP +VAPAMNT MW HP T +
Sbjct: 34 EVQVVLTKSANFFLPKAAAYNPTMFAAFEALN--VTIHRDEDEWNAWNVIGDPILHIQLRDWADVCVVAPLSANSMAKLANGLCDNLLTCVARAWS--QSKPLLVAPAMNTQMWAHPCTGK 150
BLAST of mRNA_H-elongata_contig87783.16309.1 vs. uniprot
Match: A0A024TQ70_9STRA (Flavoprotein domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TQ70_9STRA) HSP 1 Score: 156 bits (394), Expect = 3.080e-44 Identity = 72/119 (60.50%), Postives = 94/119 (78.99%), Query Frame = 1
Query: 4 VKIIVTEASKHFMDRSRVYDPQAHAAFTSLDPPVMVLDDSEEWGAWNAIGDPVLHIELRDWADMILVAPLSANTLGKLANGLCDNLLTCVARAWDFENKKPFVVAPAMNTHMWRHPMTD 360
V+I+VT+A+ F+D + YDP AHAAF +L P+ L D +EW AW+++GDPVLHI+LRDWAD++ +APLSANT+ KLA+GLCDNLLTCVARAW KP +VAPAMNT M++H +T
Sbjct: 163 VRILVTKAATFFLDMAAAYDPVAHAAFDALALPI--LHDDDEWSAWSSLGDPVLHIQLRDWADVLCIAPLSANTMAKLAHGLCDNLLTCVARAWS--PTKPVIVAPAMNTQMYQHRVTS 277
BLAST of mRNA_H-elongata_contig87783.16309.1 vs. uniprot
Match: A0A1V9YYZ2_9STRA (Phosphopantothenoylcysteine decarboxylase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YYZ2_9STRA) HSP 1 Score: 151 bits (382), Expect = 5.840e-44 Identity = 67/121 (55.37%), Postives = 95/121 (78.51%), Query Frame = 1
Query: 1 QVKIIVTEASKHFMDRSRVYDPQAHAAFTSLDPPVMVLDDSEEWGAWNAIGDPVLHIELRDWADMILVAPLSANTLGKLANGLCDNLLTCVARAWDFENKKPFVVAPAMNTHMWRHPMTDR 363
+V++++T+A+ F++++ Y+P AA+ +L+ + + D +EW +WNAIGDP+LHI+LRDWAD+ +VAPLSAN++ KLANGL DNLLTCVARAW + KP +VAPAMNT MW HP TD+
Sbjct: 38 EVQLVLTKAAAFFLEKAASYNPSMFAAYEALN--ITIHRDEDEWSSWNAIGDPILHIQLRDWADVFVVAPLSANSMAKLANGLSDNLLTCVARAWS--SAKPLLVAPAMNTQMWLHPCTDK 154
BLAST of mRNA_H-elongata_contig87783.16309.1 vs. uniprot
Match: A0A8J2X3Y8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X3Y8_9STRA) HSP 1 Score: 154 bits (388), Expect = 5.900e-43 Identity = 67/118 (56.78%), Postives = 88/118 (74.58%), Query Frame = 1
Query: 4 VKIIVTEASKHFMDRSRVYDPQAHAAFTSLDPPVMVLDDSEEWGAWNAIGDPVLHIELRDWADMILVAPLSANTLGKLANGLCDNLLTCVARAWDFENKKPFVVAPAMNTHMWRHPMT 357
V+++ TE + F+ ++R YD A+ AF + +L D +EW WN +GDPVLH++LR+WAD++L+APL ANTL KLANGLCD+LL+C ARAWD + KP VVAPAMNT MW HPMT
Sbjct: 245 VRVVATERGRFFLGKARTYDGAAYGAFEQAQ--IEILSDDDEWARWNQVGDPVLHVDLREWADLLLIAPLGANTLAKLANGLCDDLLSCTARAWDLD--KPVVVAPAMNTAMWSHPMT 358
BLAST of mRNA_H-elongata_contig87783.16309.1 vs. uniprot
Match: M5WVI3_PRUPE (Flavoprotein domain-containing protein n=6 Tax=Prunus TaxID=3754 RepID=M5WVI3_PRUPE) HSP 1 Score: 148 bits (373), Expect = 1.270e-42 Identity = 70/121 (57.85%), Postives = 87/121 (71.90%), Query Frame = 1
Query: 1 QVKIIVTEASKHFMDRSRVYDPQAHAAFTSLDPPVMVLDDSEEWGAWNAIGDPVLHIELRDWADMILVAPLSANTLGKLANGLCDNLLTCVARAWDFENKKPFVVAPAMNTHMWRHPMTDR 363
+VK + T AS HF+DR TSL V++ D +EW +WN +GD VLHIELR WAD++++APLSANTLGK+A GLCDNLLTCV RAWD+ KPF VAPAMNT MW++P T+R
Sbjct: 50 EVKAVATRASLHFIDR------------TSLPKDVILYTDEDEWSSWNKMGDSVLHIELRRWADILVIAPLSANTLGKIAGGLCDNLLTCVVRAWDYS--KPFFVAPAMNTLMWKNPFTER 156
BLAST of mRNA_H-elongata_contig87783.16309.1 vs. uniprot
Match: A0A1V9ZY52_9STRA (Phosphopantothenoylcysteine decarboxylase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZY52_9STRA) HSP 1 Score: 147 bits (371), Expect = 2.210e-42 Identity = 64/120 (53.33%), Postives = 91/120 (75.83%), Query Frame = 1
Query: 4 VKIIVTEASKHFMDRSRVYDPQAHAAFTSLDPPVMVLDDSEEWGAWNAIGDPVLHIELRDWADMILVAPLSANTLGKLANGLCDNLLTCVARAWDFENKKPFVVAPAMNTHMWRHPMTDR 363
V+I++T+++ F++++ Y+P+ +AAF +L V + D EW WNAIGD +LHI+LR+WA++ +VAPLSANT+ KL NG+CDNLLTCVARAW + KP ++APAMNT MW HP T +
Sbjct: 40 VQIVLTKSANFFLEKAEKYNPEVYAAFQTLG--VKIYLDDNEWDTWNAIGDDILHIQLREWAEVFVVAPLSANTMAKLTNGICDNLLTCVARAW--ASSKPLLIAPAMNTQMWNHPCTKK 155 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig87783.16309.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig87783.16309.1 >prot_H-elongata_contig87783.16309.1 ID=prot_H-elongata_contig87783.16309.1|Name=mRNA_H-elongata_contig87783.16309.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=122bp QVKIIVTEASKHFMDRSRVYDPQAHAAFTSLDPPVMVLDDSEEWGAWNAIback to top mRNA from alignment at H-elongata_contig87783:193..1481- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig87783.16309.1 ID=mRNA_H-elongata_contig87783.16309.1|Name=mRNA_H-elongata_contig87783.16309.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1289bp|location=Sequence derived from alignment at H-elongata_contig87783:193..1481- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig87783:193..1481- >mRNA_H-elongata_contig87783.16309.1 ID=mRNA_H-elongata_contig87783.16309.1|Name=mRNA_H-elongata_contig87783.16309.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=732bp|location=Sequence derived from alignment at H-elongata_contig87783:193..1481- (Himanthalia elongata Himel1 dioecious)back to top |