prot_H-elongata_contig87759.16307.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig87759.16307.1
Unique Nameprot_H-elongata_contig87759.16307.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length187
Homology
BLAST of mRNA_H-elongata_contig87759.16307.1 vs. uniprot
Match: D8LCV3_ECTSI (Proteasome subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCV3_ECTSI)

HSP 1 Score: 271 bits (694), Expect = 1.700e-89
Identity = 138/186 (74.19%), Postives = 154/186 (82.80%), Query Frame = 0
Query:    6 QVIPVADHILGTMAGGAADCTFWLRYLTMQANIFESQNGFPMPVATAARVLADTLLGQRGRGLSVGTMVMGCDRSGEGSKGIGD------GIGKLYYVDSEGARVKGSYFSVGSGSTYAYSILDESYRPDMSLREAADLARRAVRHATFRDAFSGGFINVFVVSASGWSRVSADDSGFLEIRTGSD 185
            +VIPV+ HILGTMAGGAADCTFWLRYL MQA +FE +NGF MPVATAARVLAD LLGQRG+GLSVGTM+MG DR    S G G       G G+L+YVDS+GARVKG YFSVGSGSTYAYS+LDE YR  MSL EAADLA+RAVRHAT+RDAFSGGFINVFVV ASGW+R+  DDSGFL++   SD
Sbjct:   68 KVIPVSQHILGTMAGGAADCTFWLRYLGMQAKVFEDRNGFQMPVATAARVLADALLGQRGKGLSVGTMIMGHDRGNRDSSGRGSVSGGNQGGGQLFYVDSDGARVKGRYFSVGSGSTYAYSVLDEGYRDGMSLEEAADLAKRAVRHATYRDAFSGGFINVFVVDASGWTRLDVDDSGFLDLTQPSD 253          
BLAST of mRNA_H-elongata_contig87759.16307.1 vs. uniprot
Match: M2W568_GALSU (Proteasome subunit beta n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W568_GALSU)

HSP 1 Score: 181 bits (460), Expect = 6.730e-54
Identity = 90/172 (52.33%), Postives = 122/172 (70.93%), Query Frame = 0
Query:    6 QVIPVADHILGTMAGGAADCTFWLRYLTMQANIFESQNGFPMPVATAARVLADTLLGQRGRGLSVGTMVMGCDRSGEGSKGIGDGIGKLYYVDSEGARVKGSYFSVGSGSTYAYSILDESYRPDMSLREAADLARRAVRHATFRDAFSGGFINVFVVSASGWSRVSADDSGF 177
            +VI +  ++LGTMAGGAADCTFW RYL M+  IFE +N   + VA A+++L +T+   +G GLS+GTM+MG D+ G            +YYVDSEG R+KGS FSVGSGST+A  +LD+ Y+ +MS+ EA +L RR++ HAT RDAFSGG+INV+ +   GW  +S +DSGF
Sbjct:   91 KVIEINKYLLGTMAGGAADCTFWERYLGMRCRIFELKNKERISVAAASKILCNTVYQYKGMGLSMGTMIMGWDKKGP----------HIYYVDSEGTRLKGSKFSVGSGSTHALGVLDQGYKWNMSVEEACELGRRSIYHATHRDAFSGGYINVYYIGPDGWKFISHEDSGF 252          
BLAST of mRNA_H-elongata_contig87759.16307.1 vs. uniprot
Match: C1EIU4_MICCC (Proteasome subunit beta n=4 Tax=Micromonas TaxID=38832 RepID=C1EIU4_MICCC)

HSP 1 Score: 181 bits (460), Expect = 1.060e-53
Identity = 94/175 (53.71%), Postives = 123/175 (70.29%), Query Frame = 0
Query:    6 QVIPVADHILGTMAGGAADCTFWLRYLTMQANIFESQNGFPMPVATAARVLADTLLGQRGRGLSVGTMVMGCDRSGEGSKGIGDGIGKLYYVDSEGARVKGSYFSVGSGSTYAYSILDESYRPDMSLREAADLARRAVRHATFRDAFSGGFINVFVVSASGWSRVSADDSGFLEI 180
            +VI +  ++LGTMAGGAADC FW R L +Q  + E +NG  + VA A+++LA+TL G RG+GLS+GTMV G D  G G          LYYVDS+G R+KG  FSVGSGS +AY +LD+ YR D+S+ EA +L RRA+ HATFRDAFSGG I+V+ V+ +GW++VS  D G L  
Sbjct:   95 KVIEINPYLLGTMAGGAADCQFWQRNLGIQCRLHELENGKRISVAGASKLLANTLYGYRGQGLSMGTMVAGWDLKGPG----------LYYVDSDGTRLKGQRFSVGSGSLFAYGVLDQGYRWDLSVEEACELGRRAIYHATFRDAFSGGTISVYHVNENGWTKVSGTDVGELHF 259          
BLAST of mRNA_H-elongata_contig87759.16307.1 vs. uniprot
Match: A0A454XIE3_OSTTA (Proteasome subunit beta n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A454XIE3_OSTTA)

HSP 1 Score: 180 bits (456), Expect = 4.610e-53
Identity = 91/175 (52.00%), Postives = 122/175 (69.71%), Query Frame = 0
Query:    6 QVIPVADHILGTMAGGAADCTFWLRYLTMQANIFESQNGFPMPVATAARVLADTLLGQRGRGLSVGTMVMGCDRSGEGSKGIGDGIGKLYYVDSEGARVKGSYFSVGSGSTYAYSILDESYRPDMSLREAADLARRAVRHATFRDAFSGGFINVFVVSASGWSRVSADDSGFLEI 180
            +VI +   +LGTMAGGAADC FW R L +Q  + E +NG  + V  A+++LA+TL   +GRGLS+GTM+ G D +G G          LYYVDSEG R+KG  FSVGSGS +AY +LD+ YR D+S++EA +L RRA+ HATFRDAFSGG ++V+ V  +GW++V+ DD G L  
Sbjct:   96 KVIEINPFLLGTMAGGAADCQFWQRNLGIQCRLHELENGKRITVRAASKLLANTLYSYKGRGLSMGTMIAGWDLNGPG----------LYYVDSEGTRLKGQRFSVGSGSLFAYGVLDQGYRWDLSVKEACELGRRAIYHATFRDAFSGGTVSVYHVGKNGWTKVTGDDVGELHF 260          
BLAST of mRNA_H-elongata_contig87759.16307.1 vs. uniprot
Match: A0A7S0CT45_MICPS (Proteasome subunit beta n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0CT45_MICPS)

HSP 1 Score: 178 bits (452), Expect = 1.600e-52
Identity = 92/175 (52.57%), Postives = 122/175 (69.71%), Query Frame = 0
Query:    6 QVIPVADHILGTMAGGAADCTFWLRYLTMQANIFESQNGFPMPVATAARVLADTLLGQRGRGLSVGTMVMGCDRSGEGSKGIGDGIGKLYYVDSEGARVKGSYFSVGSGSTYAYSILDESYRPDMSLREAADLARRAVRHATFRDAFSGGFINVFVVSASGWSRVSADDSGFLEI 180
            +VI +  ++LGTMAGGAADC FW R L +Q  + E +NG  + V  A+++LA+TL G RG+GLS+GTMV G D +G G          LYYVDS+G R+KG  FSVGSGS +AY +LD+ Y+ D+S+ EA +L RRA+ HATFRDAFSGG I+V+ VS  GW+++S  D G L  
Sbjct:  103 KVIEINPYLLGTMAGGAADCQFWQRNLGIQCRLHELENGKRISVCGASKLLANTLYGYRGQGLSMGTMVAGWDLTGPG----------LYYVDSDGTRLKGQRFSVGSGSLFAYGVLDQGYKWDLSVAEACELGRRAIYHATFRDAFSGGTISVYHVSEKGWTKMSGTDVGELHF 267          
BLAST of mRNA_H-elongata_contig87759.16307.1 vs. uniprot
Match: A0A6J0PFA4_ELAGV (Proteasome subunit beta n=4 Tax=Arecaceae TaxID=4710 RepID=A0A6J0PFA4_ELAGV)

HSP 1 Score: 177 bits (450), Expect = 1.990e-52
Identity = 93/176 (52.84%), Postives = 119/176 (67.61%), Query Frame = 0
Query:    6 QVIPVADHILGTMAGGAADCTFWLRYLTMQANIFESQNGFPMPVATAARVLADTLLGQRGRGLSVGTMVMGCDRSGEGSKGIGDGIGKLYYVDSEGARVKGSYFSVGSGSTYAYSILDESYRPDMSLREAADLARRAVRHATFRDAFSGGFINVFVVSASGWSRVSADDSGFLEIR 181
            ++I +  +++GTMAGGAADC FW R L ++  + E  N   + VA A+++LA+ L   RG GLSVGTM+ G D +G G          LYYVDSEG R+KG+ FSVGSGS YAY +LD  YR DMS+ EAA+LARRA+ HATFRDA SGG  +V+ V  SGW ++S DD G L  R
Sbjct:   88 KIIEINPYMIGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVAGASKLLANILYSYRGMGLSVGTMIAGWDETGAG----------LYYVDSEGGRLKGTRFSVGSGSPYAYGVLDNGYRYDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPSGWKKLSGDDVGELHFR 253          
BLAST of mRNA_H-elongata_contig87759.16307.1 vs. uniprot
Match: A4S728_OSTLU (Proteasome subunit beta n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S728_OSTLU)

HSP 1 Score: 178 bits (451), Expect = 2.830e-52
Identity = 90/175 (51.43%), Postives = 122/175 (69.71%), Query Frame = 0
Query:    6 QVIPVADHILGTMAGGAADCTFWLRYLTMQANIFESQNGFPMPVATAARVLADTLLGQRGRGLSVGTMVMGCDRSGEGSKGIGDGIGKLYYVDSEGARVKGSYFSVGSGSTYAYSILDESYRPDMSLREAADLARRAVRHATFRDAFSGGFINVFVVSASGWSRVSADDSGFLEI 180
            +VI +   +LGTMAGGAADC FW R L +Q  + E +NG  + V  A+++LA+TL   +G+GLS+GTMV G D +G G          LYYVDSEG R+KG  FSVGSGS +AY +LD+ Y+ D+++ EA +L RRA+ HATFRDAFSGG ++V+ V A+GW++V+ DD G L  
Sbjct:   97 KVIEINPFLLGTMAGGAADCQFWQRNLGIQCRLHELENGKRITVRAASKLLANTLYSYKGKGLSMGTMVAGWDLNGPG----------LYYVDSEGTRLKGQRFSVGSGSLFAYGVLDQGYKWDLTVEEACELGRRAIYHATFRDAFSGGTVSVYHVGANGWTKVTGDDVGELHF 261          
BLAST of mRNA_H-elongata_contig87759.16307.1 vs. uniprot
Match: A0A453QQI3_AEGTS (Proteasome endopeptidase complex n=2 Tax=Triticinae TaxID=1648030 RepID=A0A453QQI3_AEGTS)

HSP 1 Score: 173 bits (438), Expect = 1.440e-51
Identity = 90/173 (52.02%), Postives = 118/173 (68.21%), Query Frame = 0
Query:    6 QVIPVADHILGTMAGGAADCTFWLRYLTMQANIFESQNGFPMPVATAARVLADTLLGQRGRGLSVGTMVMGCDRSGEGSKGIGDGIGKLYYVDSEGARVKGSYFSVGSGSTYAYSILDESYRPDMSLREAADLARRAVRHATFRDAFSGGFINVFVVSASGWSRVSADDSGFL 178
            ++I +  ++LGTMAGGAADC FW R L ++  + E  N   + +A +++ LA+ L   RG GLS+GTM+ G D +G G          LYYVDSEGAR+KGS FSVGSGS YAY ILDE Y+ +MS+ EAA+LARRA+ HATFRD  SGG ++V+ V   GW ++S DD G L
Sbjct:   12 KIIEINPYMLGTMAGGAADCQFWHRNLGVKCRLHELANKRRISIAGSSKTLANILYSYRGMGLSIGTMIAGFDETGPG----------LYYVDSEGARLKGSRFSVGSGSLYAYGILDEGYKFNMSVEEAAELARRAIYHATFRDGASGGCVSVYYVGPDGWKKLSGDDVGEL 174          
BLAST of mRNA_H-elongata_contig87759.16307.1 vs. uniprot
Match: K8EAG6_9CHLO (Proteasome subunit beta n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8EAG6_9CHLO)

HSP 1 Score: 176 bits (447), Expect = 1.650e-51
Identity = 90/173 (52.02%), Postives = 121/173 (69.94%), Query Frame = 0
Query:    6 QVIPVADHILGTMAGGAADCTFWLRYLTMQANIFESQNGFPMPVATAARVLADTLLGQRGRGLSVGTMVMGCDRSGEGSKGIGDGIGKLYYVDSEGARVKGSYFSVGSGSTYAYSILDESYRPDMSLREAADLARRAVRHATFRDAFSGGFINVFVVSASGWSRVSADDSGFL 178
            +VI +   +LGTMAGGAADC FW R L +Q  + E + G  + V  A+++LA+TL G RGRGLS+GTMV G D +G G          L+YVDS+G R+KG  FSVGSGS +AY +LD+ +R D+S++EAA+L RRA+ HATFRDAFSGG ++V+ V   GW+++S  D G L
Sbjct:   98 KVIEINPFLLGTMAGGAADCQFWQRNLGIQCRLHELETGKRITVTGASKLLANTLYGYRGRGLSMGTMVAGWDTTGPG----------LFYVDSDGTRLKGKRFSVGSGSLFAYGVLDQGFRHDLSIKEAAELGRRAIYHATFRDAFSGGTVSVYHVGPDGWTKMSGTDVGEL 260          
BLAST of mRNA_H-elongata_contig87759.16307.1 vs. uniprot
Match: C1N025_MICPC (Proteasome subunit beta n=2 Tax=Micromonas pusilla TaxID=38833 RepID=C1N025_MICPC)

HSP 1 Score: 176 bits (445), Expect = 1.670e-51
Identity = 89/173 (51.45%), Postives = 122/173 (70.52%), Query Frame = 0
Query:    6 QVIPVADHILGTMAGGAADCTFWLRYLTMQANIFESQNGFPMPVATAARVLADTLLGQRGRGLSVGTMVMGCDRSGEGSKGIGDGIGKLYYVDSEGARVKGSYFSVGSGSTYAYSILDESYRPDMSLREAADLARRAVRHATFRDAFSGGFINVFVVSASGWSRVSADDSGFL 178
            +VI +  ++LGTMAGGAADC FW R L +Q  + E +NG  + V+ A+++L++TL G RG+GLS+GTMV G D +G G          LYYVDS+G R+KG  FSVGSGS +AY +LD+ YR D+S+ +A +L RRA+ HATFRDAFSGG ++V+ V   GW+++S  D G L
Sbjct:   92 KVIEINPYLLGTMAGGAADCQFWQRNLGIQCRLHELENGKRISVSGASKLLSNTLYGYRGQGLSMGTMVAGWDLNGPG----------LYYVDSDGTRLKGKRFSVGSGSLFAYGVLDQGYRWDLSVEDACELGRRAIYHATFRDAFSGGTVSVYHVGPDGWTKMSGTDVGEL 254          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig87759.16307.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCV3_ECTSI1.700e-8974.19Proteasome subunit beta n=1 Tax=Ectocarpus silicul... [more]
M2W568_GALSU6.730e-5452.33Proteasome subunit beta n=1 Tax=Galdieria sulphura... [more]
C1EIU4_MICCC1.060e-5353.71Proteasome subunit beta n=4 Tax=Micromonas TaxID=3... [more]
A0A454XIE3_OSTTA4.610e-5352.00Proteasome subunit beta n=2 Tax=Ostreococcus tauri... [more]
A0A7S0CT45_MICPS1.600e-5252.57Proteasome subunit beta n=1 Tax=Micromonas pusilla... [more]
A0A6J0PFA4_ELAGV1.990e-5252.84Proteasome subunit beta n=4 Tax=Arecaceae TaxID=47... [more]
A4S728_OSTLU2.830e-5251.43Proteasome subunit beta n=1 Tax=Ostreococcus lucim... [more]
A0A453QQI3_AEGTS1.440e-5152.02Proteasome endopeptidase complex n=2 Tax=Triticina... [more]
K8EAG6_9CHLO1.650e-5152.02Proteasome subunit beta n=1 Tax=Bathycoccus prasin... [more]
C1N025_MICPC1.670e-5151.45Proteasome subunit beta n=2 Tax=Micromonas pusilla... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000243Peptidase T1A, proteasome beta-subunitPRINTSPR00141PROTEASOMEcoord: 123..134
score: 40.15
coord: 112..123
score: 62.31
coord: 148..159
score: 51.89
IPR001353Proteasome, subunit alpha/betaPFAMPF00227Proteasomecoord: 7..162
e-value: 1.9E-32
score: 112.3
IPR029055Nucleophile aminohydrolases, N-terminalGENE3D3.60.20.10coord: 4..183
e-value: 3.4E-53
score: 182.3
IPR029055Nucleophile aminohydrolases, N-terminalSUPERFAMILY56235N-terminal nucleophile aminohydrolases (Ntn hydrolases)coord: 7..173
NoneNo IPR availablePANTHERPTHR11599PROTEASOME SUBUNIT ALPHA/BETAcoord: 6..176
NoneNo IPR availablePANTHERPTHR11599:SF63PROTEASOME SUBUNIT BETA TYPEcoord: 6..176
IPR023333Proteasome B-type subunitPROSITEPS51476PROTEASOME_BETA_2coord: 1..162
score: 32.683

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig87759contigH-elongata_contig87759:110..2482 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig87759.16307.1mRNA_H-elongata_contig87759.16307.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig87759 110..2509 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig87759.16307.1 ID=prot_H-elongata_contig87759.16307.1|Name=mRNA_H-elongata_contig87759.16307.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=187bp
MFLAVQVIPVADHILGTMAGGAADCTFWLRYLTMQANIFESQNGFPMPVA
TAARVLADTLLGQRGRGLSVGTMVMGCDRSGEGSKGIGDGIGKLYYVDSE
GARVKGSYFSVGSGSTYAYSILDESYRPDMSLREAADLARRAVRHATFRD
AFSGGFINVFVVSASGWSRVSADDSGFLEIRTGSDGS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000243Pept_T1A_subB
IPR001353Proteasome_sua/b
IPR029055Ntn_hydrolases_N
IPR023333Proteasome_suB-type