mRNA_H-elongata_contig12127.1631.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig12127.1631.1 vs. uniprot
Match: D8LTP4_ECTSI (Putative Leucine Rich Repeat Protein Kinase (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTP4_ECTSI) HSP 1 Score: 115 bits (287), Expect = 8.230e-27 Identity = 67/152 (44.08%), Postives = 99/152 (65.13%), Query Frame = 1
Query: 10 ANAVASSSSIPIVSEAAALISALVKLTMEYEHNDGAVEWRIRWCRSILAILRQASEIL-----GKGEDGTLEAGERPLLEDVYDSVRNLVGIIRTYEAKSKLLKLFVSSIFKRRQDEAEAIINHAISRLQLGLQVETRYKCKAIAQDVQDGL 450
A A+A S P V EAA++++ LV+L +++ N E R RWCRSI+ L +A E+L G+G+D + R LL+DV DS+ +L+ II +Y++K+ L K+FVSS+ K+RQ+EAE IN A+ RLQLGLQV ++ + VQ+GL
Sbjct: 427 AEALAQQSFFPGVREAASVVAGLVRLASDHKSNGRESEKRARWCRSIVHTLERAGEVLAKVKAGRGDDQAV----RVLLDDVQDSIADLLQIIESYKSKNALSKVFVSSLCKKRQEEAEVAINAAVQRLQLGLQVRVGQDLASVGEAVQEGL 574
BLAST of mRNA_H-elongata_contig12127.1631.1 vs. uniprot
Match: A0A6H5JVI4_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVI4_9PHAE) HSP 1 Score: 114 bits (286), Expect = 1.150e-26 Identity = 64/151 (42.38%), Postives = 98/151 (64.90%), Query Frame = 1
Query: 10 ANAVASSSSIPIVSEAAALISALVKLTMEYEHNDGAVEWRIRWCRSILAILRQASEILGKGEDGTLEAGERP----LLEDVYDSVRNLVGIIRTYEAKSKLLKLFVSSIFKRRQDEAEAIINHAISRLQLGLQVETRYKCKAIAQDVQDGL 450
A A+A S P V EAA++++ LV L ++++N E R RWCRSI+ L +A+E+LGK + G+ LL+DV DS+ +L+ II +Y++K+ L K+FVS++ K+RQ+EAE IN A+ RLQLGLQV ++ + VQ+G+
Sbjct: 552 AEALAEQSFFPGVREAASVVAGLVGLASDHKNNGKESEKRARWCRSIVHTLERAAEVLGKAREAKGGKGDSQAVHVLLDDVQDSIADLLQIIESYKSKNSLSKVFVSTLCKKRQEEAEVAINAAVQRLQLGLQVHVGQNLASVGEAVQEGI 702
BLAST of mRNA_H-elongata_contig12127.1631.1 vs. uniprot
Match: D7G7X7_ECTSI (ATP binding / amino acid binding / protein kinase/ protein serine/threonine kinase/ protein-tyrosine n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7X7_ECTSI) HSP 1 Score: 112 bits (281), Expect = 5.370e-26 Identity = 56/122 (45.90%), Postives = 92/122 (75.41%), Query Frame = 1
Query: 37 IPIVSEAAALISALVKLTMEYEHNDGAVEWRIRWCRSILAILRQASEILGKGEDGTLEAGERPLLEDVYDSVRNLVGIIRTYEAKSKLLKLFVSSIFKRRQDEAEAIINHAISRLQLGLQVE 402
+P +SEAAA++ + L + ND + R+R CRSI+ L++A +++GKG D T E R L+EDV+D++ +LV +I+T+++K+KL KLF+S++FKRR+DE +A+++ AI+RLQLGLQ++
Sbjct: 605 VPGISEAAAVLCIMANLFTDNRENDRENDSRLRQCRSIVMALKRAEKVVGKGGDTTGEVA-RVLIEDVHDAIFDLVELIKTFQSKNKLSKLFLSTLFKRRKDELDAVVDRAITRLQLGLQLQ 725
BLAST of mRNA_H-elongata_contig12127.1631.1 vs. uniprot
Match: D8LTP7_ECTSI (Two component regulator three Y domain protein/ leucine rich repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTP7_ECTSI) HSP 1 Score: 111 bits (278), Expect = 1.330e-25 Identity = 66/153 (43.14%), Postives = 99/153 (64.71%), Query Frame = 1
Query: 10 ANAVASSSSIPIVSEAAALISALVKLTMEYEHNDGAVEWRIRWCRSILAILRQASEILGKGEDGTLEAGE------RPLLEDVYDSVRNLVGIIRTYEAKSKLLKLFVSSIFKRRQDEAEAIINHAISRLQLGLQVETRYKCKAIAQDVQDGL 450
A A+A S P V EAA++++ LV L ++++N E R RWCRSI+ L +A+E+LGK +AG+ LL+DV DS+ +L+ II +Y++K+ L K+FVS++ K+RQ+EAE IN A+ RLQLGLQV ++ + VQ+GL
Sbjct: 415 AEALAQQSFFPGVREAASVVAGLVGLASDHKNNGKESEKRARWCRSIVHTLERAAEVLGK----EAKAGKGDSQAVHVLLDDVQDSIADLLQIIESYKSKNALSKVFVSTLCKKRQEEAEVAINAAVQRLQLGLQVRVGQNLASVGEAVQEGL 563
BLAST of mRNA_H-elongata_contig12127.1631.1 vs. uniprot
Match: D8LHV1_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHV1_ECTSI) HSP 1 Score: 110 bits (275), Expect = 3.450e-25 Identity = 57/130 (43.85%), Postives = 91/130 (70.00%), Query Frame = 1
Query: 37 IPIVSEAAALISALVKLTMEYEHNDGAVEWRIRWCRSILAILRQASEILGKGEDGTLEAGERPLLEDVYDSVRNLVGIIRTYEAKSKLLKLFVSSIFKRRQDEAEAIINHAISRLQLGLQVETRYKCKAI 426
+P VSE A L+S LV L + N+G + R+R CRSI+ +L +A ++ G GE+ T E R L+EDV++++ +LV +I+TY++K+KL K+ +S++FKRRQDE +A+++ A+ RLQLGL ++ AI
Sbjct: 657 VPGVSEVATLVSLLVNLVTDSCDNNGGSDGRLRQCRSIIILLNRADKVAGNGENTTGEV-TRMLIEDVHEAIFDLVELIKTYQSKNKLSKVLMSTLFKRRQDELDAVVDRAMVRLQLGLHMQVGQDVSAI 785
BLAST of mRNA_H-elongata_contig12127.1631.1 vs. uniprot
Match: D8LRE9_ECTSI (Transmembrane receptor kinase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRE9_ECTSI) HSP 1 Score: 109 bits (273), Expect = 6.320e-25 Identity = 58/138 (42.03%), Postives = 95/138 (68.84%), Query Frame = 1
Query: 37 IPIVSEAAALISALVKLTMEYEHNDGAVEWRIRWCRSILAILRQASEILGKGEDGTLEAGERPLLEDVYDSVRNLVGIIRTYEAKSKLLKLFVSSIFKRRQDEAEAIINHAISRLQLGLQVETRYKCKAIAQDVQDGL 450
+P VSEA L+S LV L + + + R+R CRSI+ +L +A ++ G GE+ T + R L++DV++++ +LV +I+TY++K+KL K+ +S++FKRRQDE +A+++ AI RLQLGLQV+ + QDV+ G+
Sbjct: 494 VPGVSEAVTLVSILVNLVKDSRDDSSGGDSRLRQCRSIVMVLNRADKVAGNGENTTGKVA-RTLIDDVHEAIFDLVELIKTYQSKNKLSKVLMSTLFKRRQDELDAVVDRAIVRLQLGLQVQ-------VGQDVKAGM 623
BLAST of mRNA_H-elongata_contig12127.1631.1 vs. uniprot
Match: D7FN19_ECTSI (Putative CTR1-like protein kinase/ leucine rich repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN19_ECTSI) HSP 1 Score: 108 bits (270), Expect = 1.630e-24 Identity = 64/150 (42.67%), Postives = 99/150 (66.00%), Query Frame = 1
Query: 1 IEAANAVASSSSIPIVSEAAALISALVKLTMEYEHNDGAVEWRIRWCRSILAILRQASEILGKGEDGTLEAGERPLLEDVYDSVRNLVGIIRTYEAKSKLLKLFVSSIFKRRQDEAEAIINHAISRLQLGLQVETRYKCKAIAQDVQDGL 450
+ AA +A IP VSEAA ++S LV L + + + ++ CRSI+ +L +A+++LGKG D E ER LLE+V+D+V +LV +I+TY+ K+KL K+ +S++FKRRQ+E +A+++ AI L LGLQV+ + QDV +GL
Sbjct: 719 LAAAEELAHHCQIPGVSEAATVVSILVHLVTDSRDSLSRGDLAVKRCRSIVMMLERAAKVLGKGGDTNSEV-ERALLEEVHDAVSDLVDLIKTYQNKNKLSKVLMSTLFKRRQEELDAVVDKAILHLHLGLQVQ-------VGQDVAEGL 860
BLAST of mRNA_H-elongata_contig12127.1631.1 vs. uniprot
Match: A0A6H5KA37_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA37_9PHAE) HSP 1 Score: 106 bits (264), Expect = 1.040e-23 Identity = 62/150 (41.33%), Postives = 98/150 (65.33%), Query Frame = 1
Query: 1 IEAANAVASSSSIPIVSEAAALISALVKLTMEYEHNDGAVEWRIRWCRSILAILRQASEILGKGEDGTLEAGERPLLEDVYDSVRNLVGIIRTYEAKSKLLKLFVSSIFKRRQDEAEAIINHAISRLQLGLQVETRYKCKAIAQDVQDGL 450
+ AA +A IP VSEAA ++S LV L + + + ++ CRSI+ +L +A+++LG G D E ER L+E+V+D+V +LV +I+TY+ K+KL K+ +S++FKRRQ+E +A+++ AI L LGLQV+ + QDV +GL
Sbjct: 576 LAAAEELAHHCQIPGVSEAATVVSILVHLVTDSRDSMSRGDGAVKRCRSIVMMLERAAKVLGNGGDTNSEV-ERALIEEVHDAVSDLVDLIKTYQNKNKLSKVLMSTLFKRRQEELDAVVDKAILHLHLGLQVQ-------VGQDVAEGL 717
BLAST of mRNA_H-elongata_contig12127.1631.1 vs. uniprot
Match: A0A6H5KF25_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF25_9PHAE) HSP 1 Score: 105 bits (262), Expect = 1.940e-23 Identity = 52/117 (44.44%), Postives = 86/117 (73.50%), Query Frame = 1
Query: 37 IPIVSEAAALISALVKLTMEYEHNDGAVEWRIRWCRSILAILRQASEILGKGEDGTLEAGERPLLEDVYDSVRNLVGIIRTYEAKSKLLKLFVSSIFKRRQDEAEAIINHAISRLQL 387
+P +SEAA ++ + L + ND A + R++ CRSI+ L++A +++GKG D T E R L+EDV+D++ +LV +I+T+++K+KL KL +S++FKRRQDE +A+++ AI+RLQL
Sbjct: 620 VPGISEAAGVLCIMANLFTDNRENDRANDSRLKQCRSIVMALKRAEKVVGKGSDTTGEVA-RVLIEDVHDAIFDLVELIKTFQSKNKLSKLLLSTLFKRRQDELDAVVDRAITRLQL 735
BLAST of mRNA_H-elongata_contig12127.1631.1 vs. uniprot
Match: D7FLN5_ECTSI (Protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLN5_ECTSI) HSP 1 Score: 101 bits (251), Expect = 4.670e-22 Identity = 58/132 (43.94%), Postives = 90/132 (68.18%), Query Frame = 1
Query: 7 AANAVASSSSIPIVSEAAALISALVKLTMEYEHNDGAVEWRIRWCRSILAILRQASEILGKGEDGTLEAGERPLLEDVYDSVRNLVGIIRTYEAKSKLLKLFVSSIFKRRQDEAEAIINHAISRLQLGLQVE 402
AA +A IP VSEAA +S LV+L + + ++ CRSI+ +L A+++LGKG D EA + L+EDV+D+V +LV +I+TY++K++L + +S++FKRRQDE +A+++ AI RL LGLQV+
Sbjct: 114 AAQELAQHCQIPGVSEAATAVSILVRLVSDSRDYAVRGDAGVKRCRSIVMMLELAAKVLGKGGDTNGEAAQA-LMEDVHDAVCDLVELIKTYQSKNRLSNVLMSTLFKRRQDELDAVVDRAILRLHLGLQVQ 244 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12127.1631.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig12127.1631.1 >prot_H-elongata_contig12127.1631.1 ID=prot_H-elongata_contig12127.1631.1|Name=mRNA_H-elongata_contig12127.1631.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=154bp IEAANAVASSSSIPIVSEAAALISALVKLTMEYEHNDGAVEWRIRWCRSIback to top mRNA from alignment at H-elongata_contig12127:6517..8436+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig12127.1631.1 ID=mRNA_H-elongata_contig12127.1631.1|Name=mRNA_H-elongata_contig12127.1631.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1920bp|location=Sequence derived from alignment at H-elongata_contig12127:6517..8436+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig12127:6517..8436+ >mRNA_H-elongata_contig12127.1631.1 ID=mRNA_H-elongata_contig12127.1631.1|Name=mRNA_H-elongata_contig12127.1631.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=924bp|location=Sequence derived from alignment at H-elongata_contig12127:6517..8436+ (Himanthalia elongata Himel1 dioecious)back to top |