prot_H-elongata_contig8650.16213.1 (polypeptide) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig8650.16213.1 vs. uniprot
Match: A0A6H5JVD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVD4_9PHAE) HSP 1 Score: 129 bits (324), Expect = 4.930e-32 Identity = 74/209 (35.41%), Postives = 115/209 (55.02%), Query Frame = 0
Query: 13 WKRAIAREMNGQTARGVWQVVE-CPKGKTVLGTRVVFKRKIDKDGRIEKCKCRLVAQGFRQVKGIHYEEFFSPTPAQASIRMVFGIK------------------------LEAKGFQ--KVDPCMFRRILHGTVVVVIVVYVDDLLVASATKCDKEQAVRDLRSCFSIKDLGQTSYYLGCHITRDRNAGTLKFDQHQYIQTVAERFDV 194
W+RA++ E G G + V+ P+G+ + +R F K +K+G++E K RLVA+GF Q+ + Y SP P+ ASI+++ + L GF+ K DPC+FR+++ VV++IV+YVDD+LVA + + D E+ + L F K+LG+ ++ GC I RD AGTL+ Q YI ++ ERFDV
Sbjct: 15 WERAMSEEFEGHLGTGTFSFVDGAPEGRRPVSSRWCFSWKTNKEGKVENFKARLVARGFSQIPNVDYFHSSSPGPSSASIKLMLAVADEKGINLNHWDVKQAQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDV 222
BLAST of mRNA_H-elongata_contig8650.16213.1 vs. uniprot
Match: A0A438IJY3_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438IJY3_VITVI) HSP 1 Score: 129 bits (325), Expect = 2.690e-31 Identity = 73/192 (38.02%), Postives = 109/192 (56.77%), Query Frame = 0
Query: 1 MGEAQASSEWPQWKRAIAREMNGQTARGVWQVVECPKGKTVLGTRVVFKRKIDKDGRIEKCKCRLVAQGFRQVKGIHYEEFFSPTPAQASIRMVFGIKLEAKGFQKVDPCMFRRILHGTVVVVIVVYVDDLLVASATKCDKEQAVRDLRSCFSIKDLGQTSYYLGCHITRDRNAGTLKFDQHQYIQTVAERF 192
+ + + SS+ +W A+ EM GVW +VE PKG ++G + +FK K D G I + K LVA+GF Q +GI Y+E FSP ++ S R++ ++ VD C++ + GT +++V+YVDD+L+AS+ + R L S F +KDLG S+ LG I RDR+ G L+ Q YI V RF
Sbjct: 751 VSQVKQSSDSEKWIEAMKDEMKSMKDNGVWDLVELPKGVKLIGCKWIFKIKRDSKGNIVRYKAHLVAKGFTQKEGIDYKETFSPVSSKDSFRIIMALE------NTVDQCIYLK-FSGTKFIILVLYVDDILLASSDVGLLHETKRFLSSKFDMKDLGNASFVLGIQIHRDRSRGILRLSQKAYIDKVLSRF 935
BLAST of mRNA_H-elongata_contig8650.16213.1 vs. uniprot
Match: A0A438FXS9_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438FXS9_VITVI) HSP 1 Score: 118 bits (296), Expect = 1.960e-27 Identity = 69/205 (33.66%), Postives = 111/205 (54.15%), Query Frame = 0
Query: 3 EAQASSEWPQWKRAIAREMNGQTARGVWQVVECPKGKTVLGTRVVFKRKIDKDGRIEKCKCRLVAQGFRQVKGIHYEEFFSPTPAQASIRMVFG-------------IKLEAKGFQKVDPCMFRRILHGTVVVVIVVYVDDLLVASATKCDKEQAVRDLRSCFSIKDLGQTSYYLGCHITRDRNAGTLKFDQHQYIQTVAERFDV 194
EA +S + +W A+ EM + VW++V+ PKG +G + VFK K D G +E+CK RLVA+G+ Q +GI + E FSP + R+V +K+ K + C++ ++ +G+ + +V+Y+DD+L+AS+ R L + F +KDLG+ S+ LG I RDR+ L Q YI V +RF++
Sbjct: 413 EALSSDKANEWLIAMRDEMQSMSDNDVWELVDLPKGYKPIGCKWVFKTKRDNKGNVERCKARLVARGYTQREGIDFTETFSPVSTKDYFRLVMALVAHFDLELHQMDVKIAFLNENKFNQCVYMKV-NGSKYIFMVLYIDDILLASSNVNLLNDTKRILSANFDMKDLGEASFVLGIEIYRDRSRNLLGLSQIAYINRVLKRFNM 616
BLAST of mRNA_H-elongata_contig8650.16213.1 vs. uniprot
Match: A5BKE8_VITVI (Integrase catalytic domain-containing protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A5BKE8_VITVI) HSP 1 Score: 116 bits (291), Expect = 9.580e-27 Identity = 71/200 (35.50%), Postives = 108/200 (54.00%), Query Frame = 0
Query: 14 KRAIAREMNGQTARGVWQVVECPKGKTVLGTRVVFKRKIDKDGRIEKCKCRLVAQGFRQVKGIHYEEFFSPTPAQASIRMVFGIKLEAK-----------------GFQK--VDPCMFRRILHGTVVVVIVVYVDDLLVASATKCDKEQAVRDLRSCFSIKDLGQTSYYLGCHITRDRNAGTLKFDQHQYIQTVAERFDV 194
K+A+ EMN GVW +VE P G ++G + VFK K D +IE+ K RLV +G+ Q +GI ++E FSP + S R++ +K K GF+ V+ C++ R+ G+ + +V+YVDD+L+AS + L + F +KDLG+ SY LG I RDR G LK Q YI+ + + F++
Sbjct: 617 KQAMDDEMNSMYMNGVWDLVELPHGCKLVGCKWVFKTKRDSSEKIERYKARLVVKGYSQREGIDFKETFSPVSTKDSFRVIMAVKPSLKQALRQWYLKFDRIITQNGFKDNTVERCIYLRV-SGSSYIFLVLYVDDILLASNDSDLLIETKHMLSTHFDMKDLGEASYVLGIKILRDRANGVLKLSQRTYIEKILKMFNM 815
BLAST of mRNA_H-elongata_contig8650.16213.1 vs. uniprot
Match: A0A438FNN4_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438FNN4_VITVI) HSP 1 Score: 113 bits (283), Expect = 1.100e-25 Identity = 70/205 (34.15%), Postives = 105/205 (51.22%), Query Frame = 0
Query: 1 MGEAQASSEWPQWKRAIAREMNGQTARGVWQVVECPKGKTVLGTRVVFKRKIDKDGRIEKCKCRLVAQGFRQVKGIHYEEFFSPTPAQASIRMVF-------------GIKLEAKGFQKVDPCMFRRILHGTVVVVIVVYVDDLLVASATKCDKEQAVRDLRSCFSIKDLGQTSYYLGCHITRDRNAGTLKFDQHQYIQTVAERF 192
+ + + SS+ +W A+ EM GVW +VE P+G +G + +FK K D G I + K RLVA+ F Q + I Y+E FSP ++ S R++ +K +D C++ + G+ +++V+YVDD+L+AS+ + R L S F +KDLG S LG I RDR+ G L Q YI V RF
Sbjct: 487 VSQVKQSSDSEKWIEAMKDEMKSMKDNGVWDLVELPEGVKSIGCKWIFKTKWDSKGNIVRYKARLVAKVFTQKEDIDYKETFSPVSSKDSFRIIMTLVAHYDLELHQMDVKTVFLNENTIDQCIYLK-FSGSKFIILVLYVDDILLASSDVGLLHETKRFLSSKFDMKDLGNASLVLGIQIHRDRSRGILGLSQKAYIDKVLSRF 690
BLAST of mRNA_H-elongata_contig8650.16213.1 vs. uniprot
Match: A0A438EBZ3_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438EBZ3_VITVI) HSP 1 Score: 112 bits (281), Expect = 2.170e-25 Identity = 73/203 (35.96%), Postives = 104/203 (51.23%), Query Frame = 0
Query: 1 MGEAQASSEWPQWKRAIAREMNGQTARGVWQVVECPKGKTVLGTRVVFKRKIDKDGRIEKCKCRLVAQGFRQVKGIHYEEFFSPTPAQASIRMVFGIKLEAKGFQKVDPCMFRRILHG---------TVVVVIVVYVDDLLVASATKCDKEQAVRDLRSCFSIKDLGQTSYYLGCHITRDRNAGTLKFDQHQYIQTVAERFDV 194
+ +A + E W A+ EM+ VW +VE P G +G + VFK K D G IE+ K RLVA+GF Q +GI Y E FSP + ++ G + G Q V C ++ ++G + V +V+YVDD+L+A+ K + + L F +KD+G+ SY LG I RDR G L Q YI V ERF +
Sbjct: 734 LSQAMSCKESELWYNAMKDEMSSMKCNDVWDLVELPNGAKTIGCKWVFKTKKDSLGNIERYKARLVAKGFTQKEGIDYTETFSPLEEEVYMKQPEGFP-SSDGEQLV--CKLKKSIYGLKQASRQCGSKVCFLVLYVDDILLATNDKGLLHEVKQFLFKNFDMKDMGEASYVLGIKIHRDRFKGILGLSQETYINKVLERFQM 933
BLAST of mRNA_H-elongata_contig8650.16213.1 vs. uniprot
Match: A5AFZ5_VITVI (Uncharacterized protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A5AFZ5_VITVI) HSP 1 Score: 112 bits (279), Expect = 3.950e-25 Identity = 65/204 (31.86%), Postives = 104/204 (50.98%), Query Frame = 0
Query: 3 EAQASSEWPQWKRAIAREMNGQTARGVWQVVECPKGKTVLGTRVVFKRKIDKDGRIEKCKCRLVAQGFRQVKGIHYEEFFSPTPAQASIRMVFGIKLEAKGFQK--------------VDPCMFRRILHGTVVVVIVVYVDDLLVASATKCDKEQAVRDLRSCFSIKDLGQTSYYLGCHITRDRNAGTLKFDQHQYIQTVAERF 192
+A SS +W A+ E VW++V P G +G + +FK K D +G +E+ K RLVA+GF Q +GI ++E FSP + S R++ ++ + + K +D C++ + G+ + +V+YVDD+L+A+ R L F +KD+G S+ LG I RDR+ G L Q YI V +R+
Sbjct: 794 QAMKSSNSQKWIEAMNEEYKSMQDNKVWELVPLPVGTKPIGCKWIFKTKRDSNGNVERYKARLVAKGFTQKEGIDFKETFSPVSTKDSFRIIMALQASRQWYFKFHQIIVSYGFEANLMDECVYHK-FSGSKYIFLVLYVDDILLATNDISILHDTKRFLSKHFEMKDIGDASFILGIQIHRDRSRGILGLSQRTYIDKVLQRY 996
BLAST of mRNA_H-elongata_contig8650.16213.1 vs. uniprot
Match: A0A6L2K573_TANCI (Putative zinc finger, CCHC-type n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A6L2K573_TANCI) HSP 1 Score: 111 bits (278), Expect = 5.520e-25 Identity = 69/212 (32.55%), Postives = 112/212 (52.83%), Query Frame = 0
Query: 13 WKRAIAREMNGQTARGVWQVVECPKGKTVLGTRVVFKRKIDKDGRIEKCKCRLVAQGFRQVKGIHYEEFFSPTPAQASIRMVFGI---------KLEAK-------------------GFQK--VDPCMFRRILHGTVVVVIVVYVDDLLVASATKCDKEQAVRDLRSCFSIKDLGQTSYYLGCHITRDRNAGTLKFDQHQYIQTVAERFDV 194
W+ A+ E+N + VW+ VE PKG + + VFK K+D +G IE+ K RLVA+G+ + + + Y+E FSP + S+R++ + +L+ K F K VD C++ + + G+ +++V+YVDD+L+AS ++ R L F +KDLG+ SY +G I +DR G L Q YI+ V RF++
Sbjct: 540 WREAMKDELNSMSKNNVWEFVELPKGAKPVRCKWVFKTKLDPNGNIERYKARLVAKGYTKKESVDYKETFSPISRKDSLRIIMALVAHFDLELHQLDVKTAFLNEDVYMAQPQVKKKHNFIKNQVDRCVYLK-MSGSNFIILVLYVDDILLASNNIDLLHESKRFLSRNFDMKDLGEASYVIGIEIHQDRANGKLGLSQKAYIERVLNRFNM 750
BLAST of mRNA_H-elongata_contig8650.16213.1 vs. uniprot
Match: A0A438GBB1_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438GBB1_VITVI) HSP 1 Score: 111 bits (277), Expect = 7.540e-25 Identity = 72/199 (36.18%), Postives = 102/199 (51.26%), Query Frame = 0
Query: 3 EAQASSEWPQWKRAIAREMNGQTARGVWQVVECPKGKTVLGTRVVFKRKIDKDGRIEKCKCRLVAQGFRQVKGIHYEEFFSPTPAQASIRMVFGIKLEAKGFQKVDPCMFRRILHG---------TVVVVIVVYVDDLLVASATKCDKEQAVRDLRSCFSIKDLGQTSYYLGCHITRDRNAGTLKFDQHQYIQTVAERF 192
+A + E W A+ EM+ VW +VE P G +G + VFK K D G IE+ K RLVA+GF Q +GI Y E FSP + ++ G + G Q V C ++ ++G + V +V+YVDD+L+A+ K + + L F +KD+G+ SY +G I RDR G L Q YI V ERF
Sbjct: 1204 QAMSCKESELWYNAMKDEMSSMKCNDVWDLVELPNGVKTIGCKWVFKTKKDSLGNIERYKARLVAKGFTQKEGIDYTETFSPLEEEVYMKQPEGFP-SSDGEQLV--CKLKKSIYGLKQASRQCGSKVCFLVLYVDDILLATNDKGLLHEVKQFLSKNFDMKDMGEASYVIGIKIHRDRFKGILGLSQETYINKVLERF 1399
BLAST of mRNA_H-elongata_contig8650.16213.1 vs. uniprot
Match: A0A438E557_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438E557_VITVI) HSP 1 Score: 110 bits (274), Expect = 1.470e-24 Identity = 72/214 (33.64%), Postives = 108/214 (50.47%), Query Frame = 0
Query: 1 MGEAQASSEWPQWKRAIAREMNGQTARGVWQVVECPKGKTVLGTRVVFKRKIDKDGRIEKCKCRLVAQGFRQVKGIHYEEFFSPTPAQASIRMVFGI---------KLEAKG----------FQKVDPCMFRRILHGTV---VVVIVVYVDDLLVASATKCDKEQAVRDLRSCFSIKDLGQTSYYLGCHITRDRNAGTLKFDQHQYIQTVAERF 192
+ + + SS+ +W A+ EM GVW +VE P+G +G + +FK K D G I + K RLVA+GF Q +GI Y+E FSP ++ S R++ + +++ K V P F + ++++V+YVDD+L+AS+ + R L S F +KDLG S+ LG I RDR+ G L Q YI V RF
Sbjct: 218 VSQVKQSSDSEKWIEAMKDEMKSMKDNGVWDLVELPEGVKPIGCKWIFKTKRDSKGNIVRYKARLVAKGFTQKEGIDYKETFSPVSSKDSFRIIMALVAHYDLELHQMDVKTAFLNGNIDETIYMVQPENFESNDSKQLWEQIIILVLYVDDILLASSDVGLLHETKRFLSSKFDMKDLGNASFVLGIQIHRDRSRGILGLSQKAYIDKVLSRF 431 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8650.16213.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig8650.16213.1 ID=prot_H-elongata_contig8650.16213.1|Name=mRNA_H-elongata_contig8650.16213.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=194bpback to top |