prot_H-elongata_contig85534.16139.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig85534.16139.1
Unique Nameprot_H-elongata_contig85534.16139.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length254
Homology
BLAST of mRNA_H-elongata_contig85534.16139.1 vs. uniprot
Match: A0A6H5JQH5_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQH5_9PHAE)

HSP 1 Score: 159 bits (401), Expect = 1.310e-40
Identity = 104/260 (40.00%), Postives = 146/260 (56.15%), Query Frame = 0
Query:    2 ARSKELVVATWNVRTMSERGTNGPWH-VEDLLMFAVKYECDFIAIQETRHDRKTTIQAPAAGYIVHCSGHCDGDGGKPGILRVGLAVRESIVRALGPDGIVPKHINARLLKVRVIFKHRAATTFIVGYAPTETAATCH------KSKFCKELRSTVVEVSASDHLSLMMDANARTGGRGEGGGLGDVWVLGPCGRDTLNDNGLRLLACAAKYKLSIVNTIFSTPKRGRISDAFTYERPKKSHRWRLDYILVRQHDHRLVR 254
            AR  +L   T+NVRT++  G N   H V  ++      +CD I +QETR   +  I     GY++  SG   G   K G+  VG+A++E++  ++G  G   + I+ RL+KVR+        TF+VGYAPTETA          K  F   L + + EV + DHL ++MDANARTG R +G    D  ++G  GRD +N+NG RLL  AA  +LS++NT F TPK G      +  + K+ HR  LD+IL+RQ D RLVR
Sbjct:   85 AREGDLSFGTFNVRTLAYSGRNPIGHNVMTVMQICAATDCDVIGLQETRRAGQGAITHD--GYVIIWSGARAGTKDKRGVHGVGIAIKETMWDSVGEGGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETARNTAGGDVNAKDSFWTALDAEIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLAADNRLSLINTYFRTPKGGVQHTFQSSNKGKEKHR--LDFILMRQTDRRLVR 338          
BLAST of mRNA_H-elongata_contig85534.16139.1 vs. uniprot
Match: A0A6H5KP87_9PHAE (Endo/exonuclease/phosphatase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP87_9PHAE)

HSP 1 Score: 138 bits (348), Expect = 1.050e-36
Identity = 90/223 (40.36%), Postives = 126/223 (56.50%), Query Frame = 0
Query:   39 ECDFIAIQETRHDRKTTIQAPAAGYIVHCSGHCDGDGGKPGILRVGLAVRESIVRALGPDGIVPKHINARLLKVRVIFKHRAATTFIVGYAPTETAATCH------KSKFCKELRSTVVEVSASDHLSLMMDANARTGGRGEGGGLGDVWVLGPCGRDTLNDNGLRLLACAAKYKLSIVNTIFSTPKRGRISDAFTYERPKKS-HRWRLDYILVRQHDHRLVR 254
            +CD I +QETR   +  I     GY++  SG   G   K G+  VG+A++E++  ++G  G   + I+ RL+KVR+        TF+VGYAPTETA          K  F   L + + EV + DHL ++MDANARTG R +G    D  ++G  GRD +N+NG RLL  AA  +LS++NT   TPK        T++   K   + RLD+IL+RQ D RLVR
Sbjct:   11 DCDVIGLQETRRAGQGAITHD--GYVIIWSGARAGTKDKRGVHGVGIAIKETMWDSVGEGGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETARNTAGGDVNAKDSFWTALDAEIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLAADNRLSLINTYIRTPK-----GVHTFQSSNKGKEKHRLDFILMRQTDRRLVR 224          
BLAST of mRNA_H-elongata_contig85534.16139.1 vs. uniprot
Match: A0A6H5KC90_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC90_9PHAE)

HSP 1 Score: 144 bits (363), Expect = 1.540e-35
Identity = 92/222 (41.44%), Postives = 128/222 (57.66%), Query Frame = 0
Query:   39 ECDFIAIQETRHDRKTTIQAPAAGYIVHCSGHCDGDGGKPGILRVGLAVRESIVRALGPDGIVPKHINARLLKVRVIFKHRAATTFIVGYAPTETAATCH------KSKFCKELRSTVVEVSASDHLSLMMDANARTGGRGEGGGLGDVWVLGPCGRDTLNDNGLRLLACAAKYKLSIVNTIFSTPKRGRISDAFTYERPKKSHRWRLDYILVRQHDHRLVR 254
            +CD I +QETR   +  I     GY++  SG   G   K G+  VG+A++E++  ++G  G   + I+ RL+KVR+        TF+VGYAPTETA          K  F   L + + EV + DHL ++MDANARTG R +G    D  ++G  GRD +N+NG RLL  AA  +LS++NT F TPK G      +  + K+ HR  LD+IL+RQ D RLVR
Sbjct:   11 DCDVIGLQETRRAGQGAITHD--GYVIIWSGARAGTKDKRGVHGVGIAIKETMWDSVGEGGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETARNTAGGDVNAKDSFWTALDAEIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLAADNRLSLINTYFRTPKGGVQHTFQSSNKGKEKHR--LDFILMRQTDRRLVR 226          
BLAST of mRNA_H-elongata_contig85534.16139.1 vs. uniprot
Match: A0A6H5KDU4_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDU4_9PHAE)

HSP 1 Score: 141 bits (355), Expect = 1.570e-34
Identity = 95/258 (36.82%), Postives = 137/258 (53.10%), Query Frame = 0
Query:    2 ARSKELVVATWNVRTMSERGTNGPWH-VEDLLMFAVKYECDFIAIQETRHDRKTTIQAPAAGYIVHCSGHCDGDGGKPGILRVGLAVRESIVRALGPDGIVPKHINARLLKVRVIFKHRAATTFIVGYAPTETAATCH-----KSKFCKELRSTVVEVSASDHLSLMMDANARTGGRGEGGGLGDVWVLGPCGRDTLNDNGLRLLACAAKYKLSIVNTIFSTPKRGRISDAFTYERPKKSHRWRLDYILVRQHDHRLV 253
            AR  ++   T+NVRT++  G N   H V  ++       CD I +QETR + + +I     GY+V  SG   G   K G+  VG+A++E++  + G +G   + I+ RL+KVR+        TF+VGYAP     T       K      L + + EV + DHL ++MDANA TGGR +G    D  ++G  GRD +N+NG R L  A   +LS+ NT F TPK G +   F      K  ++ LD+IL+RQ D R V
Sbjct:  118 AREDDVSFGTFNVRTLAYSGRNPIGHNVMTVMQICSTNGCDVIGLQETRREGQGSIAHD--GYVVIWSGARAGTKDKRGVHGVGIAIKEAMWDSAGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPRTVRTTAGGDVNAKDSLWTALDAAIREVHSRDHLVVLMDANAHTGGRRDG--CCDAKIMGAYGRDIMNNNGERFLGLALGNQLSLTNTYFRTPKGG-VQHTFQSSNKGKE-KYGLDFILMRQTDRRFV 369          
BLAST of mRNA_H-elongata_contig85534.16139.1 vs. uniprot
Match: A0A6H5KDS6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDS6_9PHAE)

HSP 1 Score: 132 bits (331), Expect = 1.290e-32
Identity = 93/245 (37.96%), Postives = 128/245 (52.24%), Query Frame = 0
Query:    7 LVVATWNVRTMSERGTNGPWHVEDLLMFAVKYECDFIAIQETRHDRKTTIQAPAAGYIVHCSGHCDGDGGKPGILRVGLAVRESIVRALGPDGIVPKHINARLLKVRVIFK-HRAATTFIVGYAPTETAATCHKSKFCKELRSTVVEVSASDHLSLMMDANARTGGRGEGGGLGDVWVLGPCGRDTLNDNGLRLLACAAKYKLSIVNTIFSTPKRGRISDAFTYERPKKSHRWRLDYILVRQHDH 250
            L VATWNVRT++  G NG      +L  A + +   + +QETR   +T   A  AG+ V C G   G     G+  VG+AV+ES+ +         + I+  L+ +R +   HR A  F+  YAPTE +    K  F  +L S V  + + + + ++MDANARTG R +GG   D  V+G  GRD LNDNG+ LL  A   +L++ NT F T K G      TY     +   RLDYIL RQ  H
Sbjct:  113 LRVATWNVRTLAVNGANGYGRAYSVLHEAARQDVSVVGMQETRRAGRTEFAA--AGFRVFCCGTETG-----GVHGVGIAVKESLCKT---STFTTEFIDESLMAMRFLLAGHRGAVNFVAAYAPTEPSTADSKRVFWGKLDSLVRRIPSKECVHVLMDANARTGDRLDGG---DGRVIGMYGRDELNDNGMLLLNFATGNRLALTNTFFETRKGGIWH---TYNGVSGNDCKRLDYILTRQAHH 341          
BLAST of mRNA_H-elongata_contig85534.16139.1 vs. uniprot
Match: A0A6H5K6H7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6H7_9PHAE)

HSP 1 Score: 133 bits (334), Expect = 1.170e-31
Identity = 86/216 (39.81%), Postives = 124/216 (57.41%), Query Frame = 0
Query:   45 IQETRHDRKTTIQAPAAGYIVHCSGHCDGDGGKPGILRVGLAVRESIVRALGPDGIVPKHINARLLKVRVIFKHRAATTFIVGYAPTETAATCH------KSKFCKELRSTVVEVSASDHLSLMMDANARTGGRGEGGGLGDVWVLGPCGRDTLNDNGLRLLACAAKYKLSIVNTIFSTPKRGRISDAFTYERPKKSHRWRLDYILVRQHDHRLVR 254
            +QETR   + +I     GY++  SG   G   K G+  VG+A++E++  ++G +G   + I+ RL+KVR+        TF+VGYAP ETA T        K  F   L + + EV + DHL ++MDANARTG R +G    D  ++G  GRD +N+NG RLL  A+  +LS+ NT F TP+ G +   F      K  ++RLD+IL+RQ D R VR
Sbjct:   12 LQETRRAGQGSIAHD--GYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPMETARTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPEGG-VQHTFRSSNKGKE-KYRLDFILMRQTDRRFVR 221          
BLAST of mRNA_H-elongata_contig85534.16139.1 vs. uniprot
Match: A0A6H5JBD7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBD7_9PHAE)

HSP 1 Score: 130 bits (328), Expect = 6.670e-31
Identity = 92/245 (37.55%), Postives = 130/245 (53.06%), Query Frame = 0
Query:    7 LVVATWNVRTMSERGTNGPWHVEDLLMFAVKYECDFIAIQETRHDRKTTIQAPAAGYIVHCSGHCDGDGGKPGILRVGLAVRESIVRALGPDGIVPKHINARLLKVRVIFK-HRAATTFIVGYAPTETAATCHKSKFCKELRSTVVEVSASDHLSLMMDANARTGGRGEGGGLGDVWVLGPCGRDTLNDNGLRLLACAAKYKLSIVNTIFSTPKRGRISDAFTYERPKKSHRWRLDYILVRQHDH 250
            L VATWNVRT++  G NG      +L  A + +   + +QETR   +T   A  AG+ V C G   G     G+  VG+AV+ES+ +         + I+ RL+ +R++   HR A  F+   APTE +    K  F  +L S V  + + + + +++DANARTG R +GG   D  V+G  GRD LNDNG+ LL  A + +L++ NT F T K G      TY     +   RLDYIL RQ  H
Sbjct:   58 LRVATWNVRTLAVIGVNGYGRAYSVLHEAARQDVSVVGMQETRRAGRTEFAA--AGFRVFCCGTETG-----GVHGVGIAVKESLCKT---STFTTEFIDERLMAMRLLLAGHRGAVNFVAASAPTEPSTASSKRVFWGKLDSLVRRIPSKECVYVLLDANARTGDRLDGG---DGRVIGMYGRDELNDNGMLLLNFATENRLALTNTFFETRKGGIWH---TYNGVSGNDCKRLDYILTRQAHH 286          
BLAST of mRNA_H-elongata_contig85534.16139.1 vs. uniprot
Match: A0A6H5KL25_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL25_9PHAE)

HSP 1 Score: 115 bits (289), Expect = 9.330e-26
Identity = 72/167 (43.11%), Postives = 98/167 (58.68%), Query Frame = 0
Query:   94 ALGPDGIVPKHINARLLKVRVIFKHRAATTFIVGYAPTETAATCH------KSKFCKELRSTVVEVSASDHLSLMMDANARTGGRGEGGGLGDVWVLGPCGRDTLNDNGLRLLACAAKYKLSIVNTIFSTPKRGRISDAFTYERPKKSHRWRLDYILVRQHDHRLVR 254
            ++G +G   + I+ RL+KVR+        TF+VGYAPTETA          K  F   L + + EV + DHL ++MDANARTG R +G    D  ++G  GRD +N+NG RLL  AA  +LS++NT F TPK G +   F      K  ++RLD+IL+RQ D R VR
Sbjct:    4 SVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETARNTAGGDVNAKDSFWTALDAEIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLAADNRLSLINTYFRTPKGG-VQHTFQSSNKGKE-KYRLDFILMRQTDRRFVR 166          
BLAST of mRNA_H-elongata_contig85534.16139.1 vs. uniprot
Match: A0A6H5KDI8_9PHAE (Reverse transcriptase domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDI8_9PHAE)

HSP 1 Score: 113 bits (282), Expect = 9.760e-25
Identity = 72/165 (43.64%), Postives = 95/165 (57.58%), Query Frame = 0
Query:   96 GPDGIVPKHINARLLKVRVIFKHRAATTFIVGYAPTETAATCH------KSKFCKELRSTVVEVSASDHLSLMMDANARTGGRGEGGGLGDVWVLGPCGRDTLNDNGLRLLACAAKYKLSIVNTIFSTPKRGRISDAFTYERPKKSHRWRLDYILVRQHDHRLVR 254
            G  G   + I+ RL+KVR+        TF+VGYAPTETA          K  F   L + + EV + DHL ++MDANARTG R +G    D  ++G  GRD +N+NG RLL  AA  +LS++NT F TPK G      +  + K+ HR  LD+IL+RQ D RL R
Sbjct:  299 GEGGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETARNTAGGDVNAKDSFWTALDAEIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLAADNRLSLINTYFRTPKGGVQHTFQSSNKGKEKHR--LDFILMRQTDRRLER 459          
BLAST of mRNA_H-elongata_contig85534.16139.1 vs. uniprot
Match: A0A6H5J5Z5_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5Z5_9PHAE)

HSP 1 Score: 111 bits (277), Expect = 1.220e-24
Identity = 67/167 (40.12%), Postives = 98/167 (58.68%), Query Frame = 0
Query:   94 ALGPDGIVPKHINARLLKVRVIFKHRAATTFIVGYAPTETAATCH------KSKFCKELRSTVVEVSASDHLSLMMDANARTGGRGEGGGLGDVWVLGPCGRDTLNDNGLRLLACAAKYKLSIVNTIFSTPKRGRISDAFTYERPKKSHRWRLDYILVRQHDHRLVR 254
            ++G +G   + I+ RL+KVR+        TF+VGYAPT+T  T        K  F   + + + EV + DHL ++MDANARTG R +G    D  ++G  GRD++N+NG RLL  A+  +LS+ NT F TPK G      T++   K  ++ LD+IL+RQ + R VR
Sbjct:    4 SVGEEGRTVECISLRLMKVRLQIGRTCGVTFVVGYAPTDTVRTTAGGDVNAKDSFWTAVDAAIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDSMNNNGERLLGPASDNQLSLTNTYFRTPKGGV---QHTFQSSNKGKKYHLDFILMRQTNRRFVR 165          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig85534.16139.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
A0A6H5JQH5_9PHAE1.310e-4040.00Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KP87_9PHAE1.050e-3640.36Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5KC90_9PHAE1.540e-3541.44Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KDU4_9PHAE1.570e-3436.82Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KDS6_9PHAE1.290e-3237.96Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K6H7_9PHAE1.170e-3139.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBD7_9PHAE6.670e-3137.55Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KL25_9PHAE9.330e-2643.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KDI8_9PHAE9.760e-2543.64Reverse transcriptase domain-containing protein n=... [more]
A0A6H5J5Z5_9PHAE1.220e-2440.12Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10coord: 8..254
e-value: 1.9E-17
score: 65.5
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 9..250

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig85534contigH-elongata_contig85534:1963..2724 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig85534.16139.1mRNA_H-elongata_contig85534.16139.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig85534 1963..2724 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig85534.16139.1 ID=prot_H-elongata_contig85534.16139.1|Name=mRNA_H-elongata_contig85534.16139.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=254bp
AARSKELVVATWNVRTMSERGTNGPWHVEDLLMFAVKYECDFIAIQETRH
DRKTTIQAPAAGYIVHCSGHCDGDGGKPGILRVGLAVRESIVRALGPDGI
VPKHINARLLKVRVIFKHRAATTFIVGYAPTETAATCHKSKFCKELRSTV
VEVSASDHLSLMMDANARTGGRGEGGGLGDVWVLGPCGRDTLNDNGLRLL
ACAAKYKLSIVNTIFSTPKRGRISDAFTYERPKKSHRWRLDYILVRQHDH
RLVR
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036691Endo/exonu/phosph_ase_sf