mRNA_H-elongata_contig85462.16131.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig85462.16131.1 vs. uniprot
Match: A0A6H5JZ97_9PHAE (CS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JZ97_9PHAE) HSP 1 Score: 391 bits (1004), Expect = 1.770e-126 Identity = 232/417 (55.64%), Postives = 271/417 (64.99%), Query Frame = 1
Query: 247 IAGVARRFDEMLRNMAGQAGSLEALLGVFFSFLHKNTDFYVTYDPAKTVKAGMGFPVGKAEQLLIKAFRSFPFKPYDERQSQAPRLE---TGGSSIKTKASSRILPT-------TKPSIDDTRGRPGESNLSSTQGPAVEKIEPRVAVTTIPDPRKPPPRPELSPLSSNSMNPDETPPTSVPGSDTPDSGAAPGGVRVRYTKDGKQVPIGNGGVTPVYYWTQTIGEATVYVDVPPGTRSKDVSCIIQPRRLKLAVRGAGSAAGGAAAASVATGV-----SGTDVLIEGELPSAVSREDSMWSLIDAKVLVISFEKATRSWWKSVVEGDPEIDTTQVDSTARIGEFDEETQATIRKIMFDQRQKALGLPTSDELSADAIFEKAKNLPGSPFLPGGAL-SGESAAP--GGGGGCLGPDG 1443
+A V R+FD++LRN+AGQAGSLEALLG FFSFLH+NTDFYVT+DP KT +AGMGFP GKAE+LL++AFRSFP+K Y + Q P G S+ K A+++I P +D G G + E S S+ PT+ G AA G + VRYT+DGKQVPIGNGGVT YYWTQT+ EATVYVDVPPGTRSKDV+CIIQPR LKL VRGAG+A DV+ +GELPSAVSREDSMWSL D K +VISFEK T+SWWKSVVEGDPEIDT++VDST +I E+D ETQ IRKIMFDQRQK+LGLPTSDEL+ADA+ E+AK LPGSPFLPGG L G+ A GGGG LGPDG
Sbjct: 1 MAEVGRKFDDVLRNLAGQAGSLEALLGAFFSFLHRNTDFYVTFDPTKTARAGMGFPAGKAEKLLLRAFRSFPYKSYGVQDEQLPAAAGRGRGPSTAKETAATKIGPAGGSTSRKNDTGVDTALGSGGPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPGEGSVAPSSXXXXXXXXPTTANGKP-----AAAGCISVRYTEDGKQVPIGNGGVTDRYYWTQTVNEATVYVDVPPGTRSKDVTCIIQPRWLKLKVRGAGTAXXXXXXXXXXXXXXXXXXGAEDVVFDGELPSAVSREDSMWSLNDGKTVVISFEKTTKSWWKSVVEGDPEIDTSKVDSTTKISEYDGETQGAIRKIMFDQRQKSLGLPTSDELNADALLERAKVLPGSPFLPGGVLFEGDCGAGVVGGGGDGLGPDG 412
BLAST of mRNA_H-elongata_contig85462.16131.1 vs. uniprot
Match: A0A7S3XL32_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XL32_HETAK) HSP 1 Score: 253 bits (647), Expect = 2.510e-74 Identity = 152/381 (39.90%), Postives = 208/381 (54.59%), Query Frame = 1
Query: 268 FDEMLRNMAGQAGSLEALLGVFFSFLHKNTDFYVTYDPAKTVKAGMGFPVGKAEQLLIKAFRSFPFKPYDERQSQAPRLETGGSSIKTKASSRILPTTKPSIDDTRGRPGESNLSSTQGPAVEKIEPRVAVTTIPDPR--KPPPRPELSPLSSNSMNPDE--TPPTSVPGSDTPDSGAAPGGVRVRYTKDGKQVPIGNGGVTPVYYWTQTIGEATVYVDVPPGTRSKDVSCIIQPRRLKLAVRGAGSAAGGAAAASVATGVSGTDVLIEGELPSAVSREDSMWSLIDAKVLVISFEKATRSWWKSVVEGDPEIDTTQVDSTARIGEFDEETQATIRKIMFDQRQKALGLPTSDELSADAIFEKAKNLPGSPFLPGGALSGE 1398
+D +L +AGQ G ++ LL FFSFLH+ TDFYV + +A MGF G AE++L+++FR FP+KP PA + + I D + K P P + N+ + + T P VP S P G+ VRYT +G Q+PIGNGG+T YYWTQT+GE T+YVD+P GTR+KD+ I P +K+ ++ ++ +IEGE P + +SMW+L D + LVI+ EK T++WW+SV++GDPEID +VDST ++ ++DEETQATIRKIMFDQ+QKALGLPTS+EL I E+AK GSPFLPGGA G+
Sbjct: 9 YDNVLLGLAGQCGGIQPLLAAFFSFLHRKTDFYVVHADDDN-QAKMGFRAGAAEKILLQSFRKFPYKPMPXXXXXXXXXXXXXXXXXXXXXXXXX----------XXXXXXXXXXXXXXPADKAAPVQHEPDDINDSQEQKKPDGPSAAAAHENAGDQLQRGTAPAPVPASSGP-------GLEVRYTDEGLQIPIGNGGITENYYWTQTLGEVTLYVDIPAGTRAKDLQVEISPSSIKIKLKAE------------------SEAIIEGEFPHTANASESMWTLEDNRTLVITLEKVTQTWWRSVIKGDPEIDAQKVDSTTKVEDYDEETQATIRKIMFDQKQKALGLPTSEELKMQGILEQAKYAKGSPFLPGGAYEGQ 353
BLAST of mRNA_H-elongata_contig85462.16131.1 vs. uniprot
Match: A0A7S2SV46_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SV46_9STRA) HSP 1 Score: 247 bits (630), Expect = 6.120e-72 Identity = 151/379 (39.84%), Postives = 206/379 (54.35%), Query Frame = 1
Query: 271 DEMLRNMAGQAGSLEALLGVFFSFLHKNTDFYVTYDPAKTVKAGMGFPVGKAEQLLIKAFRSFPFKPYDERQSQAPRLETGGSSIKTKASSRILPTTKP-----SIDDTRGRPGESNLSSTQGPAVEKIEPRVAVTTIPDPRKPPPRPELSPLSSNSMNPDETPPTSVPGSDTPDSGAAPGGVRVRYTKDGKQVPIGNGGVTPVYYWTQTIGEATVYVDVPPGTRSKDVSCIIQPRRLKLAVRGAGSAAGGAAAASVATGVSGTDVLIEGELPSAVSREDSMWSLIDAKV-----LVISFEKATRSWWKSVVEGDPEIDTTQVDSTARIGEFDEETQATIRKIMFDQRQKALGLPTSDELSADAIFEKAKNLPGSPFLP 1377
DE+L ++A + G +E LLG FFSFLH+ TDFYV YDP +A MGFP G +E++L++ FRSFP K Y ++ RLE ++ A ++ P+++ + P E T PD SS+ P T P P+ V+YT GKQVPIGNGGVT Y WTQT+ E TVY+ VP GTR+ D+ C I P++L+L ++ + +++G++P V ++SMW + D +VI+ +K ++WW VV GDP ID T VDST +I E+D ETQ IRKIMFDQ+QK+LGLPTSDEL+ +AI EKAK +PGSPFLP
Sbjct: 14 DELLMSLASKLGGIEPLLGTFFSFLHRKTDFYVQYDPKSVPQARMGFPAGVSEKMLLRKFRSFPTKDY---AAEVARLEEA-QGLRRPAGPKLRPSSEARRAAQKVPVAPSEPMEVAAXXXXXXXXXXXXXXARTVTGPD------------ASSSQAGPAAG--TPAPKMPFPE---------VKYTDKGKQVPIGNGGVTSRYTWTQTLYEVTVYIPVPQGTRAADILCTIAPKKLQLKLK------------------KEPEWILDGDMPETVRPDESMWVVEDDPAGDFGTVVITLDKIKKTWWDVVVVGDPAIDATMVDSTCKIDEYDPETQGAIRKIMFDQKQKSLGLPTSDELTTEAILEKAKYMPGSPFLP 347
BLAST of mRNA_H-elongata_contig85462.16131.1 vs. uniprot
Match: A0A7R9U371_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U371_9STRA) HSP 1 Score: 227 bits (578), Expect = 1.550e-64 Identity = 135/382 (35.34%), Postives = 207/382 (54.19%), Query Frame = 1
Query: 265 RFDEMLRNMAGQAGSLEALLGVFFSFLHKNTDFYVTYDPAKTVKAGMGFPVGKAEQLLIKAFRSFPFKPYDERQSQAPR------LETGGSSIKTKASSRILPTTKPSIDDTRGRPGESNLSSTQGPAVEKIEPRVAVTTIPDPRKPPPRPELSPLSSNSMNPDETPPTSVPGSDTPDSGAAPGGVRVRYTKDGKQVPIGNGGVTPVYYWTQTIGEATVYVDVPPGTRSKDVSCIIQPRRLKLAVRGAGSAAGGAAAASVATGVSGTDVLIEGELPSAVSREDSMWSLIDAKVLVISFEKATRSWWKSVVEGDPEIDTTQVDSTARIGEFDEETQATIRKIMFDQRQKALGLPTSDELSADAIFEKAKNLPGSPFLPGGALS 1392
RFD++ ++A Q+ +E +L + F FLH+ TDFYV + A+ + A MGF G+AE++L++ F+SF FKP Q + R + + K+KA S + + + + + T+ +V K++ + + P +PE E P+ ++ +DGKQ+P+ NGG T Y W+QT+GEAT++V +P G R++D+ I P L + + + DV++ G+ P + ++S+W+ +D +L IS +KA R+WW S + GD EIDTTQVDS +I ++D+ETQ IRKIMFDQ+QKALGLPTSDEL +FE+AK PGSPFLPGG +
Sbjct: 6 RFDDVFLSLASQSDGIEGMLRIVFDFLHRRTDFYVVKE-ARDLSARMGFNDGEAERILLRTFKSFAFKPLSAAQQKTVRKKKNKIAKRSSEAAKSKAPSPVAASPQEAAASHTATVEDELPGPTEHQSVPKMDGAAGALEERESKDPATKPE------------EVRPS------------------LKVNEDGKQIPVNNGGATDKYVWSQTLGEATMHVPLPEGMRARDIRVEILPSGLTVRKK------------------ADDDVILAGQWPRRIQGDESVWT-VDNGILTISLDKADRAWWSSALVGDVEIDTTQVDSRTKIDDYDDETQGVIRKIMFDQKQKALGLPTSDELEKQELFERAKFAPGSPFLPGGPFA 337
BLAST of mRNA_H-elongata_contig85462.16131.1 vs. uniprot
Match: A0A7S3H6E3_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H6E3_9STRA) HSP 1 Score: 213 bits (543), Expect = 1.020e-59 Identity = 137/378 (36.24%), Postives = 188/378 (49.74%), Query Frame = 1
Query: 268 FDEMLRNMAGQAGSLEALLGVFFSFLHKNTDFYVTYDPAKTVKAG--MGFPVGKAEQLLIKAFRSFPFKPYDERQSQAPRLETGGSSIKTKASSRILPTTKPSIDDTRGRPGESNLSSTQGPAVEKIEPRVAVTTIPDPRKPPPRPELSPLSSNSMNPDETPPTSVPGSDTPDSGAAPGGVRVR---YTKDGKQVPIGNGGVTPVYYWTQTIGEATVYVDVPPGTRSKDVSCIIQPRRLKLAVRGAGSAAGGAAAASVATGVSGTDVLIEGELPSAVSREDSMWSL---IDAKV--LVISFEKATRSWWKSVVEGDPEIDTTQVDSTARIGEFDEETQATIRKIMFDQRQKALGLPTSDELSADAIFEKAKNLPGSPF 1371
FD+ML ++A +AG ++ LL FFSFL + TDFYV +D KA MGFP G AE+++++AFR + + Y+ + + P T PS T +P S + P+ TPP GS YT DGKQ PIGNGG+ YYWTQT+ + TVY+D G R KDV C I+ + LK+A+RG +V+++G L V ++SMW++ D+ + +VI+ EK +WWK V+ G EIDTT+VDST IGE+D+ TQA IRKIMFDQ+QK LG PTS+E + DA+ KA +PGSP
Sbjct: 19 FDDMLTHIASKAGGIKPLLDTFFSFLERKTDFYVQFDQPAAGKASYKMGFPKGVAEKMVLQAFRQYKLQDYET----------------VMGNQKEQPATLPSPPQTPSKPTASEHLTPAAPS-------------------------------------TPPKMSSGSXXXXXXXXXXXXXXXXXXYTPDGKQYPIGNGGIGENYYWTQTLRDVTVYIDTAAGCRGKDVKCDIKAQALKVAIRG--------------------EVVVDGALEGVVKTQESMWTISTTTDSAIQQIVITLEKTRPTWWKHVISGHEEIDTTKVDSTQNIGEYDDNTQAAIRKIMFDQKQKLLGQPTSEESAMDALLAKASLVPGSPI 323
BLAST of mRNA_H-elongata_contig85462.16131.1 vs. uniprot
Match: A0A2D4C6K1_PYTIN (CS domain-containing protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C6K1_PYTIN) HSP 1 Score: 192 bits (487), Expect = 6.940e-52 Identity = 124/369 (33.60%), Postives = 175/369 (47.43%), Query Frame = 1
Query: 265 RFDEMLRNMAGQAGSLEALLGVFFSFLHKNTDFYVTYDPAKTVKAGMGFPVGKAEQLLIKAFRSFPFKPYDERQSQAPRLETGGSSIKTKASSRILPTTKPSIDDTRGRPGESNLSSTQGPAVEKIEPRVAVTTIPDPRKPPPRPELSPLSSNSMNPDETPPTSVPGSDTPDSGAAPGGVRVRYTKDGKQVPIGNGGVTPVYYWTQTIGEATVYVDVPPGTRSKDVSCIIQPRRLKLAVRGAGSAAGGAAAASVATGVSGTDVLIEGELPSAVSREDSMWSLIDAKVLVISFEKATRSWWKSVVEGDPEIDTTQVDSTARIGEFDEETQATIRKIMFDQRQKALGLPTSDELSADAIFEKAKNLPGSPF 1371
R DE+L ++A Q S+E+LL FF FLH+ TDFYV A V MGF G A++ +++AF +P + D A R + + TQ P V+ T GKQ+PIGNGG+T Y WTQT+ + TV V VP GT +K + C I+P+RL++AVR ++S + + + VL++GE P + ++S+WSL + L +S EK ++WW SV+ GD EIDT++VDST IGE+D TQ IRK MFDQ+Q+ LGLPTS+EL+ + KA+ P SP
Sbjct: 16 RHDELLLSLAQQHSSIESLLDSFFDFLHRKTDFYVV--SADPVSRRMGFRPGDAQRKVLEAFGKYPLRDVDAEAPVASRXXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXAPMQQTQAP------------------------------------------------------------VKLTDKGKQLPIGNGGITDKYTWTQTLEDVTVLVPVPEGTSAKQIECDIRPQRLRVAVR----------SSSTHSTKNPSVVLLDGEFPEKIRADESLWSLENGHTLELSLEKIRQTWWASVLRGDAEIDTSEVDSTRAIGEYDAATQGAIRKAMFDQQQRQLGLPTSEELATQELLAKARLAPNSPI 310
BLAST of mRNA_H-elongata_contig85462.16131.1 vs. uniprot
Match: A0A835Z5P8_9STRA (Nuclear migration protein nudC-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5P8_9STRA) HSP 1 Score: 177 bits (450), Expect = 3.780e-47 Identity = 101/200 (50.50%), Postives = 132/200 (66.00%), Query Frame = 1
Query: 829 KQVPIGNGGVTPV--YYWTQTIGEATVYVDVPPGTRSKDVSCIIQPRRLKLAVRGAGSAAGGAAAASVATGVSGTDVLIEGELP-SAVSREDSMWSL-IDAKVLVISFEKATRSWWKSVVEGDPEIDTTQVDSTARIGEFDEETQATIRKIMFDQRQKALGLPTSDELSADAIFEKAKNLPGSPFLPGGALSGESAAPGG 1416
KQ P+GNGG P Y WTQT+ E TVYVDVP GTR +D+ C I R L ++GAG G A+ E+P +A++ S+W+L D VLV++ EK ++WW +EG PEIDT++VDST ++G++DE+TQA IRKIMFDQ+QK +GLPTSDEL+A + EKAK PGSPF+PGG L+ APGG
Sbjct: 89 KQTPVGNGGACPDHGYCWTQTLQEVTVYVDVPKGTRGRDMVCDIGTRSLSCKLKGAG----GQQASK--------------EIPFTALAARRSLWNLDSDDGVLVVTLEKVAKTWWACALEGHPEIDTSKVDSTCKVGDYDEDTQAAIRKIMFDQKQKRMGLPTSDELTASDLLEKAKLAPGSPFMPGGPLA---DAPGG 267
BLAST of mRNA_H-elongata_contig85462.16131.1 vs. uniprot
Match: A0A6S8EVI0_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A6S8EVI0_9STRA) HSP 1 Score: 174 bits (440), Expect = 5.240e-46 Identity = 90/191 (47.12%), Postives = 120/191 (62.83%), Query Frame = 1
Query: 811 RYTKDGKQVPIGNGGVTPVYYWTQTIGEATVYVDVPPGTRSKDVSCIIQPRRLKLAVRGAGSAAGGAAAASVATGVSGTDVLIEGELPS--AVSREDSMWSLIDAK-VLVISFEKATRSWWKSVVEGDPEIDTTQVDSTARIGEFDEETQATIRKIMFDQRQKALGLPTSDELSADAIFEKAKNLPGSPFL 1374
RY KDGKQVP GNGG YYW Q++ E T+YV VPPGT SKD+ C I P +++ GV G +++EG P V+ + WS +A+ + IS +K ++WW SVV+G+PEIDT VDS ++ E+D+ETQATIR+IMFDQ QK GLPTS E++ + + EKAK + GSPFL
Sbjct: 71 RYNKDGKQVPEGNGGKGENYYWQQSLYEITIYVQVPPGTNSKDIVCEIDPGTIRV-------------------GVKGKSLILEGNYPENYKVNTGECFWSFEEAENTITISLDKREQTWWPSVVQGEPEIDTQNVDSKRKVDEYDDETQATIRRIMFDQNQKRKGLPTSGEITTNGVLEKAKYIKGSPFL 242
BLAST of mRNA_H-elongata_contig85462.16131.1 vs. uniprot
Match: A0A7S4FC07_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4FC07_CHRCT) HSP 1 Score: 172 bits (437), Expect = 2.590e-44 Identity = 126/382 (32.98%), Postives = 187/382 (48.95%), Query Frame = 1
Query: 247 IAGVARRFDEMLRNMAGQAGSLEALLGVFFSFLHKNTDFYVTYDPAKTVKAGMGFPVGKAEQLLIKAFRSFPF---KPYDERQSQAPRLETGGSSIKTKASSRILPTTKPSIDDTRGRPGESNLSSTQGPAVEKIEPRVAVTTIPDPRKPPPRPELSPLSSNSMNPDETPPTSVPGSDTPDSGAAPGGVRVRYTKDGKQVPIGNGGVTPVYYWTQTIGEATVYVDVPPGTRSKDVSCIIQPRRLKLAVRGAGSAAGGAAAASVATGVSGTDVLIEGELPSAVSREDSMWSLIDAKV----LVISFEKATRSWWKSVVEGDPEIDTTQVDSTARIGEFDEETQATIRKIMFDQRQKALGLPTSDELSADAIFEKAKNLPGSPF 1371
++GV ++DE+L N+AGQ G ++ L V FSFL++ TDF+ P MGF G AE++L+ AF + K E Q + R ++ G+++K D+ G P + SS+Q + + + ++ +++ + P ET + P + +AP V + G VP NGG T Y W QT+ + T+ V VP GTR+KD+ C+I +L L +RG A + D E+ V ++ W+L A + + EK WWKS +EGD EIDTT+VDST + E+D ETQ IRKIMFD+ QK GLPTSDE+ + + KA + GSPF
Sbjct: 1 MSGV-EKYDEVLMNVAGQCGGIQPLFDVIFSFLYRKTDFFHIMQPGDN----MGFSEGVAEKILLSAFHKYQKHAEKARQELQRDSTRRQSPGAAVKPV--------------DSEGTPKKEQQSSSQKSDQSRPDTTQSKESV--------------VATAPVQPPET------AASEPKAASAPA-ASVPHLATGADVPY-NGGKTDRYTWEQTLHDVTIQVPVPEGTRAKDIICVISKSKLHLKIRGQPDA--------IIDKSYPCDARNGKEIWEKVRVDECTWALEQAGSGRPRVSVYLEKERECWWKSALEGDQEIDTTKVDSTRSLYEYDGETQGAIRKIMFDEEQKRKGLPTSDEIQNEDLLRKAWDAEGSPF 333
BLAST of mRNA_H-elongata_contig85462.16131.1 vs. uniprot
Match: A0A8J2SCW8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SCW8_9STRA) HSP 1 Score: 170 bits (431), Expect = 6.270e-44 Identity = 124/377 (32.89%), Postives = 175/377 (46.42%), Query Frame = 1
Query: 262 RRFDEMLRNMAGQAGSLEALLGVFFSFLHKNTDFYVTYDPAKTVKAGMGFPVGKAEQLLIKAFRSFPFKPYDERQSQAPRLETGGSSIKTKASSRILPTTKPSIDDTRGRPGESNLSSTQGPAVEKIEPRVAVTTIPDPRKPPPRPELSPLSSNSMNPDETPPTSVPGSDTPDSGAAPGGVRVRYTKDGKQVPIGNGGVTPVYYWTQTIGEATVYVDVPPGTRSKDVSCIIQPRRLKLAVRGAGSAAGGAAAASVATGVSGTDVLIEGELPSAVSREDSMWSLI----DAKVLVISFEKATRSWWKSVVEGDP---EIDTTQVDSTARIGEFDEETQATIRKIMFDQRQKALGLPTSDELSADAIFEKAKNLPGSPF 1371
+ D++ A +AG ++ LL FF FLH+ TDFY+ + K GF G+AE ++ AF + P +P + GS+++ A+ ++ + + VE+ R A G+D G VRYT DG Q+P+GNGG+ + WTQT+ E TV +DVP T++KDV+C I R L L + AGGA V + G + S W+L D LV++ EK +WW+SV + P +ID +VDST R+ E+DE+TQA IRK MFDQRQ+ GLPTS+E D+I E AKNLP SPF
Sbjct: 5 QELDQIFLAAAERAGGIQPLLTSFFGFLHRRTDFYIEHGGVKGRAYDAGFAPGQAEAMVRAAFMAHPTRPLE------------GSNVERSAA--------------------AHRAGCEATLVERARDRKAXXXXXXXXX-----------------------XARGADGRYDG-------VRYTDDGVQIPVGNGGIAATHSWTQTLYETTVTIDVPAATKAKDVACKISARGLTLDI------AGGA-------------VSLAGNWYDVIDAGASCWTLDRPGRDRACLVLTLEKTQETWWRSVFKDAPKADQIDAQKVDSTKRMDEYDEKTQAGIRKCMFDQRQRRRGLPTSEESQVDSILESAKNLPNSPF 300 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig85462.16131.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig85462.16131.1 >prot_H-elongata_contig85462.16131.1 ID=prot_H-elongata_contig85462.16131.1|Name=mRNA_H-elongata_contig85462.16131.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=410bp MTDIAGVARRFDEMLRNMAGQAGSLEALLGVFFSFLHKNTDFYVTYDPAKback to top mRNA from alignment at H-elongata_contig85462:2..2506- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig85462.16131.1 ID=mRNA_H-elongata_contig85462.16131.1|Name=mRNA_H-elongata_contig85462.16131.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2505bp|location=Sequence derived from alignment at H-elongata_contig85462:2..2506- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig85462:2..2506- >mRNA_H-elongata_contig85462.16131.1 ID=mRNA_H-elongata_contig85462.16131.1|Name=mRNA_H-elongata_contig85462.16131.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2460bp|location=Sequence derived from alignment at H-elongata_contig85462:2..2506- (Himanthalia elongata Himel1 dioecious)back to top |