prot_H-elongata_contig85220.16111.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig85220.16111.1
Unique Nameprot_H-elongata_contig85220.16111.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length205
Homology
BLAST of mRNA_H-elongata_contig85220.16111.1 vs. uniprot
Match: A0A6H5K2J8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2J8_9PHAE)

HSP 1 Score: 125 bits (313), Expect = 1.620e-31
Identity = 72/167 (43.11%), Postives = 92/167 (55.09%), Query Frame = 0
Query:    1 EAVGQRYSQVDTFVYLGRTISSVGDVGPEIKRRTGYAWNCFLKYSKALYNNPYIAVADKVRFLKVEVLEVMLYDCVTWTLSPGDFDKLREAHRGMLLRCINAYTSTRAAPDYHMLSYHGVVLRTDC-ECIEVAVMKRIFHYAGHVTRMHDDRLPNIVMRGEMVGGKR 166
            +AVG  + Q   FVYLG  I   G +  EI  R   A  CF + S+A+Y+ P   +  KVR L+ EV+E +LY CVTW L P ++ KLR AH   LLRCI      R   D   LSY   ++   C E +E  V KR   +AG V RM D+RLP I + GE+ GG R
Sbjct:  116 DAVGMVFKQKKDFVYLGGKICQDGSIEGEINHRVQRAHACFRRNSQAMYDRPGGPLRLKVRLLQAEVVETLLYGCVTWNLKPAEYRKLRSAHHFFLLRCIG--WKKRERKD-RPLSYAKALITAGCDESVEATVRKRRLCFAGFVARMRDERLPKIALLGELQGGAR 279          
BLAST of mRNA_H-elongata_contig85220.16111.1 vs. uniprot
Match: A0A6H5KBT2_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBT2_9PHAE)

HSP 1 Score: 119 bits (297), Expect = 8.950e-28
Identity = 59/164 (35.98%), Postives = 89/164 (54.27%), Query Frame = 0
Query:    1 EAVGQRYSQVDTFVYLGRTISSVGDVGPEIKRRTGYAWNCFLKYSKALYNNPYIAVADKVRFLKVEVLEVMLYDCVTWTLSPGDFDKLREAHRGMLLRCINAYTSTRAAPDYHMLSYHGVVLRTDCECIEVAVMKRIFHYAGHVTRMHDDRLPNIVMRGEMVGG 164
            EA GQ+Y+Q   F YLG  ++  GD+  EI  R+  AW C  +Y + L++ P      K+R L+ E +E +LY C+TW+   G +  LR  H  +LLR I      R    Y  LSY  ++ R +C+ +E  + ++   +AG + R  D RLP  +M GE+ GG
Sbjct:  345 EAAGQKYAQTTEFRYLGGLVNEHGDLTREINYRSRGAWACLRRYGRELFDRPQAPFRLKIRLLRAEAMEALLYGCMTWSPLSGHYQTLRSIHHRLLLRVIGY---KRKKDTYRQLSYAQMLKRVECQRVEATIRQQRLLFAGALERQSDGRLPKRLMFGELAGG 505          
BLAST of mRNA_H-elongata_contig85220.16111.1 vs. uniprot
Match: UPI001AA1A1FE (hypothetical protein n=1 Tax=Vibrio parahaemolyticus TaxID=670 RepID=UPI001AA1A1FE)

HSP 1 Score: 99.4 bits (246), Expect = 1.410e-22
Identity = 59/158 (37.34%), Postives = 76/158 (48.10%), Query Frame = 0
Query:   63 LKVEVLEVMLYDCVTWTLSPGDFDKLREAHRGMLLRCINAYTSTRAAPDYHMLSYHGVVLRTDCECIEVAVMKRIFHYAGHVTRMHDDRLPNIVMRGEMVGGKRKR--GQPA-------------KCLEHRVTEYCTAFGIDPKCWMRATQDAPEWYR 205
            LK EV+E +LY CVTWTL+   F KLR AH  +LLR I      R   D+  LSY   +  T CE IE  + KR   +AG V R H+ RLP+ +M G + GG   +  GQP              K  E    +    FG+    W  A +   +WYR
Sbjct:    2 LKAEVIETLLYGCVTWTLNADHFAKLRSAHHEVLLRVIGFQRRLRT--DHTTLSYAKALRITRCESIETTIRKRRLFFAGAVVRQHEGRLPSRLMFGTIAGGGSPKPGGQPKTWPRAIAEDLRVFKATEGSTEDSPLVFGVGTALWPTAAKQTGKWYR 157          
BLAST of mRNA_H-elongata_contig85220.16111.1 vs. uniprot
Match: UPI001CF21395 (uncharacterized protein LOC122952729 n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF21395)

HSP 1 Score: 104 bits (259), Expect = 1.840e-22
Identity = 64/198 (32.32%), Postives = 92/198 (46.46%), Query Frame = 0
Query:    6 RYSQVDTFVYLGRTISSVGDVGPEIKRRTGYAWNCFLKYSKALYNNPYIAVADKVRFLKVEVLEVMLYDCVTWTLSPGDFDKLREAHRGMLLRCINAYTSTRAAPDYHMLSYHGVVLRTDCECIEVAVMKRIFHYAGHVTRMHDDRLPNIVMRGEMVGGKRKRGQPAKCLEHRVTEYCTAFGIDPKCWMRATQDAPEW 203
            R   VDTFVYLG TIS  G +  EI  RT  A   F K  K ++++  I +  K+      +L  +LY    WT       +L   H+  L R +N    +   PD       GV+   +C  IE  +MK    +AGHV RM D+R+P  +  GE++ GKR + +P K  +  +     AF I  + W    +   EW
Sbjct:  204 RLEFVDTFVYLGSTISRDGSLDAEINLRTQKASIAFRKLEKRVWSDRGITIKTKISVYSTCILTALLYSSECWTTHQRHLKQLETFHQKCLRRILNIKWQS-LTPDT------GVLQIAECPSIESLIMKNQLRWAGHVVRMEDERIPKQLFYGELMTGKRPQHKPKKRFKDCIKNNLKAFKIPVENWETLAKSRTEW 394          
BLAST of mRNA_H-elongata_contig85220.16111.1 vs. uniprot
Match: UPI00077B22FF (uncharacterized protein LOC107355912 n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077B22FF)

HSP 1 Score: 103 bits (257), Expect = 4.250e-22
Identity = 62/199 (31.16%), Postives = 94/199 (47.24%), Query Frame = 0
Query:    6 RYSQVDTFVYLGRTISSVGDVGPEIKRRTGYAWNCFLKYSKALYNNPYIAVADKVRFLKVEVLEVMLYDCVTWTLSPGDFDKLREAHRGMLLRCINAYTSTRAAPDYHMLSYHGVVLR-TDCECIEVAVMKRIFHYAGHVTRMHDDRLPNIVMRGEMVGGKRKRGQPAKCLEHRVTEYCTAFGIDPKCWMRATQDAPEW 203
            R   VDTFVYLG TIS  G +  EI  RT  +   F K  K ++++  I +  K+      +L  +LY    WT       +L+  H+  L R +N          +  L+    VL+  +C  IE  +MK    +AGHV RM D+R+P  +  GE++ GKR++ +P K  +  +     AF I  + W    +   EW
Sbjct:  329 RLEVVDTFVYLGSTISRDGSLDAEINLRTQKSSAAFRKLEKRVWSDRGITIKTKISVYSTCILTALLYSSECWTTHQRHLKQLKRFHQKCLRRILNI--------KWRSLTSDTAVLQIAECPTIESLIMKNQLRWAGHVVRMEDERIPKQLFYGELMTGKRQQHKPKKRFKDCIKNNLKAFKIPVENWETLAKSRTEW 519          
BLAST of mRNA_H-elongata_contig85220.16111.1 vs. uniprot
Match: UPI001CF59A58 (uncharacterized protein LOC122965242 n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF59A58)

HSP 1 Score: 102 bits (254), Expect = 7.380e-22
Identity = 62/198 (31.31%), Postives = 90/198 (45.45%), Query Frame = 0
Query:    6 RYSQVDTFVYLGRTISSVGDVGPEIKRRTGYAWNCFLKYSKALYNNPYIAVADKVRFLKVEVLEVMLYDCVTWTLSPGDFDKLREAHRGMLLRCINAYTSTRAAPDYHMLSYHGVVLRTDCECIEVAVMKRIFHYAGHVTRMHDDRLPNIVMRGEMVGGKRKRGQPAKCLEHRVTEYCTAFGIDPKCWMRATQDAPEW 203
            R   VDTFVYLG TIS  G +  EI  RT      F K  K ++++  I +  K+      +L  +LY    WT       +L   H+  L R +N    +   PD  +L         +C  IE  +MK    +AGHV RM D+R+P  +  GE++ GKR + +P K  +  +     AF I  + W    +   EW
Sbjct:  151 RLEVVDTFVYLGSTISRDGSLDAEINLRTQKTGTAFGKLEKRVWSDRGITIKTKISVYSTCILTALLYSSECWTTHQRHLKQLERFHQKCLRRILNIKWQS-LTPDTAVLQI------AECPSIESLIMKNQLRWAGHVVRMEDERIPKQLFYGELMTGKRPQHKPKKRFKDCIKNNLKAFKIPVENWETLAKSRTEW 341          
BLAST of mRNA_H-elongata_contig85220.16111.1 vs. uniprot
Match: A0A6S7JKI9_PARCT (Uncharacterized protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JKI9_PARCT)

HSP 1 Score: 96.3 bits (238), Expect = 2.210e-20
Identity = 60/200 (30.00%), Postives = 90/200 (45.00%), Query Frame = 0
Query:    4 GQRYSQVDTFVYLGRTISSVGDVGPEIKRRTGYAWNCFLKYSKALYNNPYIAVADKVRFLKVEVLEVMLYDCVTWTLSPGDFDKLREAHRGMLLRCINAYTSTRAAPDYHMLSYHGVVLRTDCECIEVAVMKRIFHYAGHVTRMHDDRLPNIVMRGEMVGGKRKRGQPAKCLEHRVTEYCTAFGIDPKCWMRATQDAPEW 203
            GQ+     TF YLG TIS    +  EI+RR   A + F +    ++ +  I +  K+   K  V+  +LY   TWTL      KL EA +   LR I         P   +L       R  C  +E  + KR   +AGH+ RM D+RLP I++ GE+  G R  G+P K  +  + +   +  +  + W    +D   W
Sbjct:  103 GQKLKTTKTFPYLGSTISDDAQLDHEIERRIAKASSSFERLKDRVWKSHDIKLETKIALFKAVVISTLLYGGETWTLYARHIKKL-EAFQQRSLRSIMRVKWEEKTPHSEVLE------RAKCCSVESILKKRQLQWAGHIVRMDDERLPKILLYGELQQGNRMVGRPRKRYKDSLKDALKSCNVPLQSWETRAEDRASW 295          
BLAST of mRNA_H-elongata_contig85220.16111.1 vs. uniprot
Match: A0A6S7K883_PARCT (RNA-directed DNA polymerase from mobile element jockey-like (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7K883_PARCT)

HSP 1 Score: 96.7 bits (239), Expect = 5.790e-20
Identity = 61/200 (30.50%), Postives = 92/200 (46.00%), Query Frame = 0
Query:    4 GQRYSQVDTFVYLGRTISSVGDVGPEIKRRTGYAWNCFLKYSKALYNNPYIAVADKVRFLKVEVLEVMLYDCVTWTLSPGDFDKLREAHRGMLLRCINAYTSTRAAPDYHMLSYHGVVLRTDCECIEVAVMKRIFHYAGHVTRMHDDRLPNIVMRGEMVGGKRKRGQPAKCLEHRVTEYCTAFGIDPKCWMRATQDAPEW 203
            GQ+     TF YLG TIS+   +  EI+RR   A + F +    ++ +  I +  K+   KV V+  +LY   TWTL      KL EA +   LR I         P   +L       R  C  +E  + KR   +AGH+ RM D+RLP I++ GE+  G R  G+P K  +  + +   +  +  + W    +D   W
Sbjct:  170 GQKLKTTKTFPYLGSTISNDEQLHHEIERRIAKASSSFGRLKDRVWKSHDIKLETKIALFKVVVISTLLYGGETWTLYARHIKKL-EAFQQRSLRSIMRVKWEEKTPHSEVLE------RAKCCSVESILKKRQLQWAGHIVRMDDERLPKILLYGELQQGNRMVGRPRKRYKDSLKDALKSCNVPLQSWETRAEDRASW 362          
BLAST of mRNA_H-elongata_contig85220.16111.1 vs. uniprot
Match: A0A7D9M5G6_PARCT (RNA-directed DNA polymerase from mobile element jockey-like (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9M5G6_PARCT)

HSP 1 Score: 96.3 bits (238), Expect = 1.530e-19
Identity = 60/200 (30.00%), Postives = 90/200 (45.00%), Query Frame = 0
Query:    4 GQRYSQVDTFVYLGRTISSVGDVGPEIKRRTGYAWNCFLKYSKALYNNPYIAVADKVRFLKVEVLEVMLYDCVTWTLSPGDFDKLREAHRGMLLRCINAYTSTRAAPDYHMLSYHGVVLRTDCECIEVAVMKRIFHYAGHVTRMHDDRLPNIVMRGEMVGGKRKRGQPAKCLEHRVTEYCTAFGIDPKCWMRATQDAPEW 203
            GQ+     TF YLG TIS    +  EI+RR   A + F +    ++ +  I +  K+   K  V+  +LY   TWTL      KL EA +   LR I         P   +L       R  C  +E  + KR   +AGH+ RM D+RLP I++ GE+  G R  G+P K  +  + +   +  +  + W    +D   W
Sbjct:  456 GQKLKTTKTFPYLGSTISDDAQLDHEIERRIAKASSSFERLKDRVWKSHDIKLETKIALFKAVVISTLLYGGETWTLYARHIKKL-EAFQQRSLRSIMRVKWEEKTPHSEVLE------RAKCCSVESILKKRQLQWAGHIVRMDDERLPKILLYGELQQGNRMVGRPRKRYKDSLKDALKSCNVPLQSWETRAEDRASW 648          
BLAST of mRNA_H-elongata_contig85220.16111.1 vs. uniprot
Match: A0A8C5PP25_9ANUR (Reverse transcriptase domain-containing protein n=10 Tax=Leptobrachium leishanense TaxID=445787 RepID=A0A8C5PP25_9ANUR)

HSP 1 Score: 94.4 bits (233), Expect = 7.520e-19
Identity = 60/200 (30.00%), Postives = 92/200 (46.00%), Query Frame = 0
Query:    4 GQRYSQVDTFVYLGRTISSVGDVGPEIKRRTGYAWNCFLKYSKALYNNPYIAVADKVRFLKVEVLEVMLYDCVTWTLSPGDFDKLREAHRGMLLRCINAYTSTRAAPDYHMLSYHGVVLRTDCECIEVAVMKRIFHYAGHVTRMHDDRLPNIVMRGEMVGGKRKRGQPAKCLEHRVTEYCTAFGIDPKCWMRATQDAPEW 203
            GQR + VD F YLG  +S    +  E+  R   A   F +  K +++   I    K++  +  VL  +L+ C TWT+      KL   H   L + +      +  PD  +L      +R D   I   + +    +AGHV RM D+RLP +++ GE+  GKR +G   K  +  +     AF I+P  W  A QD  +W
Sbjct:  708 GQRLNAVDKFTYLGSILSRSVVMDDELIARLAKANAAFGRLRKNVWDRRGIRQKTKIKVYRAAVLSTLLHGCETWTIYQRHAKKLNHFHTTSLRKLLGIKWQDKV-PDTEVL------VRADLPSIFTILAQSQLRWAGHVARMKDNRLPKMLLFGELTQGKRSQGGQKKRYKDTLKAALKAFNINPINWELAAQDKIKW 900          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig85220.16111.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K2J8_9PHAE1.620e-3143.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KBT2_9PHAE8.950e-2835.98Reverse transcriptase domain-containing protein (F... [more]
UPI001AA1A1FE1.410e-2237.34hypothetical protein n=1 Tax=Vibrio parahaemolytic... [more]
UPI001CF213951.840e-2232.32uncharacterized protein LOC122952729 n=1 Tax=Acrop... [more]
UPI00077B22FF4.250e-2231.16uncharacterized protein LOC107355912 n=1 Tax=Acrop... [more]
UPI001CF59A587.380e-2231.31uncharacterized protein LOC122965242 n=1 Tax=Acrop... [more]
A0A6S7JKI9_PARCT2.210e-2030.00Uncharacterized protein n=1 Tax=Paramuricea clavat... [more]
A0A6S7K883_PARCT5.790e-2030.50RNA-directed DNA polymerase from mobile element jo... [more]
A0A7D9M5G6_PARCT1.530e-1930.00RNA-directed DNA polymerase from mobile element jo... [more]
A0A8C5PP25_9ANUR7.520e-1930.00Reverse transcriptase domain-containing protein n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR47027FAMILY NOT NAMEDcoord: 4..175

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig85220contigH-elongata_contig85220:635..1249 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig85220.16111.1mRNA_H-elongata_contig85220.16111.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig85220 635..1249 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig85220.16111.1 ID=prot_H-elongata_contig85220.16111.1|Name=mRNA_H-elongata_contig85220.16111.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=205bp
EAVGQRYSQVDTFVYLGRTISSVGDVGPEIKRRTGYAWNCFLKYSKALYN
NPYIAVADKVRFLKVEVLEVMLYDCVTWTLSPGDFDKLREAHRGMLLRCI
NAYTSTRAAPDYHMLSYHGVVLRTDCECIEVAVMKRIFHYAGHVTRMHDD
RLPNIVMRGEMVGGKRKRGQPAKCLEHRVTEYCTAFGIDPKCWMRATQDA
PEWYR
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