mRNA_H-elongata_contig84815.16080.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig84815.16080.1 vs. uniprot
Match: D8LF22_ECTSI (Amine oxidase-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF22_ECTSI) HSP 1 Score: 266 bits (681), Expect = 1.720e-83 Identity = 139/237 (58.65%), Postives = 166/237 (70.04%), Query Frame = 2
Query: 125 DVEFWPPLPKKKIVAFSRMGMCRVVKVVLRFELPVLPQLLHGCICSESFIPEFWFRHLSDVPRGRDTCLAVGFATGPQADAIVALKPEEALKKALHQLDDMFRDRKWFKDAANRFKGKDDRE-------GQGAEKLQPLEEAVGIGNTPSVESTVLPSSGYVNGLVYDWA-NEPFVRGGYSYPRLDFDENTNADAAAAVDNILFFAGEHTNTPSGMTAHAAIDSGKRAALEVMEAIR 811
DVEF PPLP+ K+ AF MG+C +VKV+L+F+ VLP LLHGCICSESFIPEFWFRHL ++P G T LAVGFA GP+ADA+ ++KP+EALKKAL QLDDMFR RKW + GK D E G E +P E G LPSS YV GLV+DW +EPFVRGGY YPR+ FDE T+A AA+V+ LFFAGEHTNTP+G T HAAIDSG RAA V++A++
Sbjct: 213 DVEFVPPLPEAKLAAFQHMGLCSIVKVILKFDRRVLPPLLHGCICSESFIPEFWFRHLPNLPEGGYTMLAVGFAAGPRADAVTSVKPKEALKKALDQLDDMFRGRKWLEGGG--CTGKGDWEETVEVHTGIAPEHCEPRRETSVSGGQGEGTLAELPSSAYVGGLVHDWVKDEPFVRGGYCYPRIGFDETTHAHLAASVNGTLFFAGEHTNTPTGTTVHAAIDSGDRAASGVLQAVQ 447
BLAST of mRNA_H-elongata_contig84815.16080.1 vs. uniprot
Match: A0A6H5JVR3_9PHAE (PAO protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVR3_9PHAE) HSP 1 Score: 268 bits (685), Expect = 3.260e-83 Identity = 136/225 (60.44%), Postives = 160/225 (71.11%), Query Frame = 2
Query: 125 DVEFWPPLPKKKIVAFSRMGMCRVVKVVLRFELPVLPQLLHGCICSESFIPEFWFRHLSDVPRGRDTCLAVGFATGPQADAIVALKPEEALKKALHQLDDMFRDRKWFKDAANRFKGK-----DDREGQGAEKLQPLEEAVGIGNTPSVESTVLPSSGYVNGLVYDWA-NEPFVRGGYSYPRLDFDENTNADAAAAVDNILFFAGEHTNTPSGMTAHAAIDSGKR 781
DVEF PPLP+ K+ AF MG+C +VKV+L+F+ VLPQLLHGCICSESFIPEFWFRHL ++P G T LAVGFA GP+ADA+ ++KPEEALKKAL QLDDMFR RKW + KG + G E +P E G G LPSS YV GLV+DW +EPFVRGGY YPR+ FDE T+A AA+++ LFFAGEHTNTP+GMT HAAIDSG R
Sbjct: 314 DVEFVPPLPEAKLSAFQHMGLCSIVKVILKFDRRVLPQLLHGCICSESFIPEFWFRHLPNLPEGGYTMLAVGFAAGPRADAVTSVKPEEALKKALDQLDDMFRGRKWLEGGGCTGKGDWEEAVEGNTGIAPEHCEPHRETSGSGGQGEGTLAELPSSAYVGGLVHDWVKDEPFVRGGYCYPRIGFDETTHAHLAASINGTLFFAGEHTNTPTGMTVHAAIDSGDR 538
BLAST of mRNA_H-elongata_contig84815.16080.1 vs. uniprot
Match: A0A482T0E8_9ARCH (Amino_oxidase domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T0E8_9ARCH) HSP 1 Score: 117 bits (293), Expect = 1.050e-26 Identity = 83/240 (34.58%), Postives = 115/240 (47.92%), Query Frame = 2
Query: 119 CQDVEFWPPLPKKKIVAFSRMGMCRVVKVVLRFELPVLPQLLHGCICS--ESFIPEFWFRHLSDVP--RGRDTCLAVGFATGPQADAIVALKPEEALKKALHQLDDMFRDRKWFKDAANRFKGKDDREGQGAEKLQPLEEAVGIGNTPSVESTV---LPSSGYVNGLVYDWANE--PFVRGGYSYPRLDFDENTNADAAAAVDNILFFAGEHTNTPSGMTAHAAIDSGKRAALEVMEAIR 811
C + F P LP+KK+ A S M + +KV ++F P+ L G I + E+ PE WFR SD+ R + C A F T AD + A+ E +K + Q+D MF L+P V + N + V PSS Y+ G++ W E PF+ GGY P N+ AA VDN+LFFAGE N G TAHAA+++G RAA +V +A+R
Sbjct: 205 CGYIRFNPTLPRKKVEALSYTKMNKAMKVFIKFSAVCWPKNLIGTITANTETCFPEIWFRDCSDITLDRRQGVCYATAFVTSKYADRLCAMPEHEVYRKMVEQMDVMF------------------------SHLEPRH-CVPLLNGDEKKVKVDLPRPSSVYLGGMMKKWTAEDHPFIGGGYCSPLAGCPVNSGDLIAAPVDNMLFFAGEAANLGPGATAHAALETGVRAASQVNQALR 419
BLAST of mRNA_H-elongata_contig84815.16080.1 vs. uniprot
Match: A0A024GDC4_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GDC4_9STRA) HSP 1 Score: 117 bits (293), Expect = 5.360e-26 Identity = 75/242 (30.99%), Postives = 114/242 (47.11%), Query Frame = 2
Query: 125 DVEFWPPLPKKKIVAFSRMGMCRVVKVVLRFELPVLPQLLHGCICSESFIPEFW------------FRHLSDVPRGRDTCLAVGFATGPQADAIVALKPEEALKKALHQLDDMFRDRKWFKDAANRFKGKDDREGQGAEKLQPLEEAVGIGNTPSVESTVLPSSGYVNGLVYDWANEPFVRGGYSYPRLDFDENTNADAAAAVDNILFFAGEHTNTPS-GMTAHAAIDSGKRAALEVMEAIR 811
D+++ P LPK+K+ A + GM R +K++L P HG ICS+ FIPEFW F S GFAT AD + E+ +++ + QLD ++ G E L TP+ S ++ G+ +DW + PF+RGGYSYP++ E + A +++N +FFAGE T+ GM H A+D+G+RAA EV+ ++R
Sbjct: 772 DIKYVPELPKEKLDAVNSFGMTRAIKIILLVSEQFWPSDTHGVICSDLFIPEFWINSTAGIGYLHKFTSASQEFASEVLYTITGFATSDFADKVCKFSKEDVIEQFVSQLDRIY----------------------GDETLP----------TPATLS-------FIKGMYFDWGDVPFIRGGYSYPKVGQCEGASEKVAKSIENRIFFAGEATSFERPGMAVHCAMDTGERAAREVLLSLR 974
BLAST of mRNA_H-elongata_contig84815.16080.1 vs. uniprot
Match: F0W4T9_9STRA (Uncharacterized protein ALNC14_022690 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W4T9_9STRA) HSP 1 Score: 113 bits (283), Expect = 4.390e-25 Identity = 75/242 (30.99%), Postives = 112/242 (46.28%), Query Frame = 2
Query: 125 DVEFWPPLPKKKIVAFSRMGMCRVVKVVLRFELPVLPQLLHGCICSESFIPEFWFRH------LSDVPRGRDTCLA------VGFATGPQADAIVALKPEEALKKALHQLDDMFRDRKWFKDAANRFKGKDDREGQGAEKLQPLEEAVGIGNTPSVESTVLPSSGYVNGLVYDWANEPFVRGGYSYPRLDFDENTNADAAAAVDNILFFAGEHTNTPS-GMTAHAAIDSGKRAALEVMEAIR 811
D+++ P LPK+KI A + GM R +K++L P HG ICS+ FIPEFW L D R + GFAT AD + + + + L+QLD M+ D +T +T+ ++ G+ +DW + PF+RGGYSYP++ E + A +++N +FFAGE T+ GM H A+D+G RAA EV ++R
Sbjct: 272 DIKYEPELPKEKIDAVNSFGMTRAIKIILVVSKRFWPADTHGVICSDMFIPEFWINSNAGIGFLHDFADNRKELSSEIYYTITGFATAEFADNLKKFTENQIICQFLNQLDLMYGD-----------------------------------DTVPTPATL----SFIKGMYFDWGDVPFIRGGYSYPKVGQMEGASEQIAKSIENRIFFAGEATSFERPGMAVHCAMDTGDRAAREVSASLR 474
BLAST of mRNA_H-elongata_contig84815.16080.1 vs. uniprot
Match: A0A250X0T7_9CHLO (Amino_oxidase domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250X0T7_9CHLO) HSP 1 Score: 110 bits (275), Expect = 4.040e-24 Identity = 69/231 (29.87%), Postives = 108/231 (46.75%), Query Frame = 2
Query: 128 VEFWPPLPKKKIVAFSRMGMCRVVKVVLRFELPVLPQLLHGCICSESFIPEFWFRHLSDVPRGRD-TCLAVGFATGPQADAIVALKPEEALKKALHQLDDMFRDRKWFKDAANRFKGKDDREGQGAEKLQPLEEAVGIGNTPSVESTVLPSSGYVNGLVYDWANEPFVRGGYSYPRLDFDENTNADAAAAVDNILFFAGEHTNTPSGMTAHAAIDSGKRAALEVMEAIRVI 817
++F PPLP+ K A SR+ M ++K++L F+ P+ + IC++SF+PE W +V G+ + GF +G +AD A+ A+ L QLD +F TP E+ + G+VYDW+ FV+GGYSYP L AA V +FFAGE T+T A+D+G+RAA +V+ +++++
Sbjct: 247 LKFSPPLPEAKRSAISRVKMGNIIKIILSFKEQFWPENMFDLICTDSFVPEMWMLRYQEVMPGKGHPNIITGFISGEKADIASAMPESTAIASFLGQLDSIF-------------------------------------GTP--EAPKPATHNLAAGVVYDWSKNDFVKGGYSYPSLGALRGDRESLAAPVAGTVFFAGEATSTALNPCVQGAMDTGRRAATQVLASLQLL 438
BLAST of mRNA_H-elongata_contig84815.16080.1 vs. uniprot
Match: A0A0P1AT21_PLAHL (Amine oxidase-like protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AT21_PLAHL) HSP 1 Score: 108 bits (271), Expect = 1.140e-23 Identity = 71/247 (28.74%), Postives = 111/247 (44.94%), Query Frame = 2
Query: 128 VEFWPPLPKKKIVAFSRMGMCRVVKVVLRFELPVLPQLLHGCICSESFIPEFWFRHLSDV----------------PRGRDT---CLAVGFATGPQADAIVALKPEEALKKALHQLDDMFRDRKWFKDAANRFKGKDDREGQGAEKLQPLEEAVGIGNTPSVESTVLPSSGYVNGLVYDWANEPFVRGGYSYPRLDFDENTNADAAAAVDNILFFAGEHTNTPS-GMTAHAAIDSGKRAALEVMEAI 808
+ + PPLP++K+ A M R KV+L P+ HG ICS+ F+PEFWF + + D+ L GFA+ A+ + + +E ++ L QLD ++ +V+ +V G+ DW +EP++ GGY+YPR+ ++ +++ AA VDN LFFAGE T GM+ HAA+D+G RAA +V A+
Sbjct: 208 IAYSPPLPQQKLNAVKSFDMRRAGKVILHMSGQFWPENAHGVICSDCFLPEFWFNSTQGIGHLKTNGDKQYVANVTDKSADSGAKYLITGFASALYAEKFIGMDHDEIVEGFLDQLDMIY---------------------------------------GTVDEPFPARKNFVKGIYKDWGDEPWICGGYAYPRVGQSDSASSELAAPVDNRLFFAGEATAFEQPGMSVHAAVDTGTRAAAQVTHAL 415
BLAST of mRNA_H-elongata_contig84815.16080.1 vs. uniprot
Match: G4ZPG5_PHYSP (Amino_oxidase domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZPG5_PHYSP) HSP 1 Score: 107 bits (268), Expect = 1.560e-23 Identity = 72/250 (28.80%), Postives = 112/250 (44.80%), Query Frame = 2
Query: 128 VEFWPPLPKKKIVAFSRMGMCRVVKVVLRFELPVLPQLLHGCICSESFIPEFWFRHLSDV----PRGRDTCLA-----------------VGFATGPQADAIVALKPEEALKKALHQLDDMFRDRKWFKDAANRFKGKDDREGQGAEKLQPLEEAVGIGNTPSVESTVLPSSGYVNGLVYDWANEPFVRGGYSYPRLDFDENTNADAAAAVDNILFFAGEHTNTPS-GMTAHAAIDSGKRAALEVMEAIR 811
+ + P LP++KI A + M R KV+L P+ HG ICSE F+PEFWF + P G +T +A GFA A++ V + ++ ++ L QLD ++ +V+ +V G+ DW +EP++ GGY++PR+ + + D AA VDN +FFAGE T GM+ HAAID+G RA+++ A++
Sbjct: 152 IAYTPDLPQEKIEAVNSFSMRRAGKVLLHMSGRFWPEDAHGVICSECFLPEFWFNSSKGIGHLQPNGDNTLIAEPETEDAVEEDKAQYLITGFAGALYAESFVGVDHDKIIENFLDQLDMIY---------------------------------------GTVDEPKPAHKHFVRGMYKDWGDEPWIGGGYAFPRVGQSDTASQDLAAPVDNRIFFAGEATAFEQPGMSVHAAIDTGSRASVQAARALQ 362
BLAST of mRNA_H-elongata_contig84815.16080.1 vs. uniprot
Match: D8RYP0_SELML (Amino_oxidase domain-containing protein n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RYP0_SELML) HSP 1 Score: 107 bits (268), Expect = 5.300e-23 Identity = 78/234 (33.33%), Postives = 110/234 (47.01%), Query Frame = 2
Query: 122 QDVEFWPPLPKKKIVAFSRMGMCRVVKVVLRFELPVLPQLLHGCICSESFIPEFWFRHL----SDVPRGRDTCLAVGFATGPQADAIVALKPEEALKKALHQLDDMFRDRKWFKDAANRFKGKDDREGQGAEKLQPLEEAVGIGNTPSV---ESTVLPSSGYVNGL-VYDWANEPFVRGGYSYPRLDFDENTNADAAAAVDNILFFAGEHTNTPSGMTAHAAIDSGKRAALEVM 799
+ + F PPLPK K+ A S +GM VK++L F P+ + +C++ F+PEFW S + L VGF G A I L E +AL QLD++F K K+A ++ +E+ G + + + P+S Y + DW+ E FVRGGYS+P L+ + A V LFFAGE T+ AAIDSG RAA EV+
Sbjct: 264 ESIRFNPPLPKSKVDAASTIGMSSAVKILLAFSQRFWPEEMFDVVCTDCFVPEFWATQYPCKSSRDEEALGSVLLVGFIAGETARQISKLSHSEIFSRALSQLDEIFAKIKPTKNAKL--------------SIETFQESGGFYTRAAAKPFDPELQPASFYFAAASLVDWSREDFVRGGYSHPSLNA-RGAREELAKPVHGRLFFAGEATHPGVNPCMQAAIDSGIRAAREVL 482
BLAST of mRNA_H-elongata_contig84815.16080.1 vs. uniprot
Match: A0A484DUS0_BRELC (Amino_oxidase domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DUS0_BRELC) HSP 1 Score: 106 bits (264), Expect = 1.860e-22 Identity = 76/249 (30.52%), Postives = 111/249 (44.58%), Query Frame = 2
Query: 128 VEFWPPLPKKKIVAFSRMGMCRVVKVVLRFELPVLPQLLHGCICSESFIPEFWFRHLSDVPR-------------------GRDTCLAVGFATGPQADAIVALKPEEALKKALHQLDDMFRDRKWFKDAANRFKGKDDREGQGAEKLQPLEEAVGIGNTPSVESTVLPSSGY-VNGLVYDWANEPFVRGGYSYPRLDFDENTNADAAAAVDNILFFAGEHTNTPS-GMTAHAAIDSGKRAALEVMEAIR 811
+ + P LP++K+ A + M R KV+L + P+ HG ICS+ F+PEFW + G L GFA AD V ++ + ++ L QLD ++ G + PS P+ Y V G DW +EP++RGGY+YPR+ + + D AA V+N LFFAGE T GM+ HAA+D+G RAA+EV A++
Sbjct: 274 IAYTPALPQQKLDAVASFDMRRAGKVLLHMKGRFWPENTHGVICSDCFLPEFWINSTEGIGHLKANGDILCVKNEIKNPDDGEAQYLITGFAGALYADKFVGMEHKLIIEGFLDQLDMIY----------------------------------GTLDEPS------PAHKYFVKGTYKDWGDEPWIRGGYAYPRVGQSDTASKDLAAPVNNRLFFAGEATAYEQPGMSVHAAVDTGTRAAMEVARALQ 482 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig84815.16080.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig84815.16080.1 >prot_H-elongata_contig84815.16080.1 ID=prot_H-elongata_contig84815.16080.1|Name=mRNA_H-elongata_contig84815.16080.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=214bp MGMCRVVKVVLRFELPVLPQLLHGCICSESFIPEFWFRHLSDVPRGRDTCback to top mRNA from alignment at H-elongata_contig84815:2..2136+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig84815.16080.1 ID=mRNA_H-elongata_contig84815.16080.1|Name=mRNA_H-elongata_contig84815.16080.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2135bp|location=Sequence derived from alignment at H-elongata_contig84815:2..2136+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig84815:2..2136+ >mRNA_H-elongata_contig84815.16080.1 ID=mRNA_H-elongata_contig84815.16080.1|Name=mRNA_H-elongata_contig84815.16080.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1284bp|location=Sequence derived from alignment at H-elongata_contig84815:2..2136+ (Himanthalia elongata Himel1 dioecious)back to top |