prot_H-elongata_contig84761.16073.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig84761.16073.1
Unique Nameprot_H-elongata_contig84761.16073.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length368
Homology
BLAST of mRNA_H-elongata_contig84761.16073.1 vs. uniprot
Match: A0A6H5L581_9PHAE (ABC protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L581_9PHAE)

HSP 1 Score: 443 bits (1140), Expect = 1.270e-141
Identity = 273/460 (59.35%), Postives = 300/460 (65.22%), Query Frame = 0
Query:    1 SQGPVAELIAAGKVAMVAGDRSVASQRLQQATKVAPENPKAWRALADFLETGNDNKALAEALKACVDIAESKGNFGRSRPVRLRLSEVREAAGDRRGALAALKDFTLNPKAMMATTAPPVPSAGPKVSVAARAAAAAAKKD------------AEVVRDAENSVMKDRSTRLFMEINASL------------------------------------------------------------------------------RMEALSEHCARLDEPGDAAGRRRAAVAVAKSLAASNAEAPWVEAQLRELL--GGSPAAREGALLAIHAMCEVGGPGAEPSVVSLLPLVLVACGAQAASVRTAAADAGAAVARALNPFAVKVVLPSLRAAVESDTWRVKAGALEVMAIMAESSPAQVAQALPEIVPVVSHQVWDTKKEVQQASKHALLAACACIGNPDIEPLV 368
            SQ  V  L+A  K A+ AGDR+ AS +L +ATK+AP+NPKAWRALADFLETGNDNK LAEAL  CVDIAESKGN+GRSRP+RLRLSEVREAAGDRRGALAALK FT NP AM                   +  A+AA K             AE VRD EN+ MKDRSTRLFME+NA L                                                                              R+++L+EHC  L E GDA+ RRRAAVAVA+S+AASNAEAPWVEAQLRE L  G +PAAREGALLAIHAMCE+ GPG EP VV+LLPLVL A GAQAA VR AAADAGAAVAR LNP AV+V LP +  AV SDTWR+KAGALEVMA+MAESSP QVA ALPEIVPVVSHQVWDTKKEVQ ASKHALLAACACIGNPDIEPLV
Sbjct:   14 SQPTVGSLLAGAKAAVAAGDRTAASHQLHEATKLAPDNPKAWRALADFLETGNDNKQLAEALSKCVDIAESKGNYGRSRPLRLRLSEVREAAGDRRGALAALKAFTSNPAAMSXXXXXXXXXXXXXXXXVDKKNASAAAKXXXXXXTDXXXXXAEAVRDTENAAMKDRSTRLFMELNADLVPACAPAPPPAPLRTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGPKLTAWVRNGVKASASSMMSAEEIAALGDGERLQSLAEHCGCLGEAGDASARRRAAVAVARSIAASNAEAPWVEAQLREFLPEGNAPAAREGALLAIHAMCELAGPGGEPYVVALLPLVLQANGAQAAQVRAAAADAGAAVARTLNPHAVRVALPMITEAVASDTWRIKAGALEVMAVMAESSPQQVALALPEIVPVVSHQVWDTKKEVQAASKHALLAACACIGNPDIEPLV 473          
BLAST of mRNA_H-elongata_contig84761.16073.1 vs. uniprot
Match: A0A836CGS6_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGS6_9STRA)

HSP 1 Score: 147 bits (372), Expect = 2.340e-35
Identity = 98/211 (46.45%), Postives = 124/211 (58.77%), Query Frame = 0
Query:  167 SLRMEALSEHCARLDEPGDAAGRRRAAVAVAKSLAASNAEAPWVEAQLRELLG--GSPAAREGALLAIHAMCEVGGPGAEPSVVSLLPLVLVACGAQAASVRTAAADAGAAVARALNPFAVKVVLPSLRAAVESDTWRVKA-------GALEVMAIMAESSPAQVAQALPEIVPVVSHQVWDTKKEVQQASKHALLAACACIGNPDIEPLV 368
            S R+E LS  C  L       GRRRAAVA+A+++AAS+AEAPWVEAQL   L    +P AREGALLA+ A  ++    AEP + +LLP  L A    A +VR AA DAG A+ RAL+P A+++ LPS+   ++S  WR+K        G+L  +                         VWDT ++VQ ASKHALLAACACI NPDIEPLV
Sbjct:    4 SERLERLSTLCLMLSGEETGEGRRRAAVAIAEAIAASSAEAPWVEAQLAGFLADASAPTAREGALLAVQAQSQLARHAAEPFLAALLPATLAAHADAAPAVRHAAVDAGQALVRALSPHALRLALPSVLEGMDSREWRIKVRRYGVDVGSLHTLCAXXXXXXXXXXXXXXXXXXXXXX-VWDTHRQVQAASKHALLAACACIANPDIEPLV 213          
BLAST of mRNA_H-elongata_contig84761.16073.1 vs. uniprot
Match: K0SN41_THAOC (4Fe-4S ferredoxin-type domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SN41_THAOC)

HSP 1 Score: 116 bits (290), Expect = 7.330e-25
Identity = 65/146 (44.52%), Postives = 98/146 (67.12%), Query Frame = 0
Query:  224 AREGALLAIHAMCEVGGPGAEPSVVSLLPLVLVACGAQAASVRTAAADAGAAVARALNPFAVKV-VLPSLRAAVESDTWRVKAGALEVMAIMAESSPAQVAQALPEIVPVVSHQVWDTKKEVQQASKHALLAACACIGNPDIEPLV 368
            AREGALL + A+ E+G    EP VV +L   L  CG+ ++S+R AA+DA  A+    NP A+ + V+P L  A++S  WRVK+ ALE ++ +A  +P QV++ LP+I+P+V+ Q+WDTK +V +A+  ALL+ C    NPDI+P +
Sbjct:  216 AREGALLLLRALSELGLKSVEPFVVPMLAAALDECGSSSSSLREAASDASVAIITLANPLAMPMLVIPVLFEALQSPEWRVKSTALERLSQVAADAPRQVSKMLPQIIPIVTAQIWDTKPQVTKAANQALLSVCETNDNPDIKPAI 361          
BLAST of mRNA_H-elongata_contig84761.16073.1 vs. uniprot
Match: B8C3P2_THAPS (TOG domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C3P2_THAPS)

HSP 1 Score: 113 bits (283), Expect = 6.490e-24
Identity = 65/146 (44.52%), Postives = 93/146 (63.70%), Query Frame = 0
Query:  224 AREGALLAIHAMCEVGGPGAEPSVVSLLPLVLVACGAQAASVRTAAADAGAAVARALNPFAVK-VVLPSLRAAVESDTWRVKAGALEVMAIMAESSPAQVAQALPEIVPVVSHQVWDTKKEVQQASKHALLAACACIGNPDIEPLV 368
            AREGALL I A CE+G    EP VV L+   L  CG+ ++SVR AA DA  A+    N  A+  +++P L  A+ S  WRVKA AL+ +  ++  +P QV++ LP++VP V+ Q+WDTK +V +A+  ALLA C    NPD++P +
Sbjct:  227 AREGALLLIRAFCELGMKSVEPYVVPLMAAALDECGSSSSSVREAAEDASVAIVMIANILAMPALIVPVLFEALRSPEWRVKAAALDRLCQVSTKAPRQVSKMLPQVVPTVTAQIWDTKPQVTKAALAALLAVCQTNDNPDVQPAI 372          
BLAST of mRNA_H-elongata_contig84761.16073.1 vs. uniprot
Match: A0A7S3PWC4_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PWC4_9STRA)

HSP 1 Score: 110 bits (274), Expect = 8.980e-23
Identity = 66/148 (44.59%), Postives = 91/148 (61.49%), Query Frame = 0
Query:  222 PAAREGALLAIHAMCEVGGPGAEPSVVSLLPLVLVACGAQAASVRTAAADAGAAVARALNPFAVK-VVLPSLRAAVESDTWRVKAGALEVMAIMAESSPAQVAQALPEIVPVVSHQVWDTKKEVQQASKHALLAACACIGNPDIEPLV 368
            P AREG LL + A+ E+ G  +EP VV LL   L  C + ++ VR AA D    +   LN  A+  +V P L  A++S  WRVKA A+E ++  AE  P Q+++ LP+IVPV++ QVWDTK +V +A+K  LLA C    NPD+ P V
Sbjct:  196 PEAREGCLLILRALAEIVGKASEPIVVPLLAAALEECSSSSSFVREAAEDTAKIIISILNGHALPALVCPVLFEALQSPEWRVKAAAMEKLSECAELHPRQISRMLPQIVPVITSQVWDTKPQVTKAAKDCLLACCMTNINPDVAPAV 343          
BLAST of mRNA_H-elongata_contig84761.16073.1 vs. uniprot
Match: A0A7S1VSC1_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VSC1_9STRA)

HSP 1 Score: 109 bits (272), Expect = 1.680e-22
Identity = 66/147 (44.90%), Postives = 90/147 (61.22%), Query Frame = 0
Query:  224 AREGALLAIHAMCEVGGPGAEPSVVS-LLPLVLVACGAQAASVRTAAADAGAAVARALNPFAV-KVVLPSLRAAVESDTWRVKAGALEVMAIMAESSPAQVAQALPEIVPVVSHQVWDTKKEVQQASKHALLAACACIGNPDIEPLV 368
            AREG+LL I A+CE  G  AEP VV   L   L  CG+ ++SVR AA D  +A+    NP+A  K++ P L  ++ S  WRVK  ALE ++  A ++P QV   LP+++P V+ QVWDTK +V + +   LLA C   GNPDI P +
Sbjct:  201 AREGSLLIIRALCETVGKKAEPYVVGGFLAAALDECGSSSSSVREAAEDTASALVTLANPWAFPKLICPLLIQSLTSTEWRVKYNALERLSQCAATAPKQVCSLLPDLIPRVTDQVWDTKVQVSKGANSCLLAMCGTCGNPDISPAI 347          
BLAST of mRNA_H-elongata_contig84761.16073.1 vs. uniprot
Match: F0YQU4_AURAN (TOG domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YQU4_AURAN)

HSP 1 Score: 99.4 bits (246), Expect = 4.200e-20
Identity = 56/146 (38.36%), Postives = 87/146 (59.59%), Query Frame = 0
Query:  223 AAREGALLAIHAMCEVGGPGAEPSVVSLLPLVLVACGAQAASVRTAAADAGAAVARALNPFAVKVVLPSLRAAVESDTWRVKAGALEVMAIMAESSPAQVAQALPEIVPVVSHQVWDTKKEVQQASKHALLAACACIGNPDIEPLV 368
            AAREGA+  +H + +  G  AEP  + +LP ++     +   V  A      A  +A+NP+A   +LP L   + + +W+ K G L+++  +A ++P QV Q LPEIVP V+  +WDTK EV+QA+K +L   C  I NPD++P+V
Sbjct:   62 AAREGAVFVVHELHKALGLHAEPYFMLVLPALVERYDDKVKGVAAAVDACLMAFFQAVNPYAAATLLPHLFTGMSTISWKTKVGCLKLLGALAHTAPTQVGQLLPEIVPKVTENMWDTKPEVKQAAKSSLGECCTVIHNPDVQPIV 207          
BLAST of mRNA_H-elongata_contig84761.16073.1 vs. uniprot
Match: A0A7S3ZV50_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZV50_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 7.040e-20
Identity = 56/146 (38.36%), Postives = 89/146 (60.96%), Query Frame = 0
Query:  223 AAREGALLAIHAMCEVGGPGAEPSVVSLLPLVLVACGAQAASVRTAAADAGAAVARALNPFAVKVVLPSLRAAVESDTWRVKAGALEVMAIMAESSPAQVAQALPEIVPVVSHQVWDTKKEVQQASKHALLAACACIGNPDIEPLV 368
            AAREGA+L  HA+    G   EP ++ +LP ++     +  +V  A     +A  +A+NP+A   +LP L A + + +W+ K G L+++  +A ++P Q+ Q LPE+VP V+  +WDTK EV+QA+K  L   C  I NPD++P+V
Sbjct:   62 AAREGAVLVCHALHTKLGLHFEPYMLLVLPALIERFDDKVKTVANAVDACLSAFVQAVNPYAAATLLPFLFAGMGTISWKTKVGCLKLLGTLAHTAPTQIGQLLPEVVPKVTENMWDTKPEVKQAAKACLGECCTVIHNPDVQPIV 207          
BLAST of mRNA_H-elongata_contig84761.16073.1 vs. uniprot
Match: F0XY24_AURAN (TOG domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XY24_AURAN)

HSP 1 Score: 99.0 bits (245), Expect = 9.660e-20
Identity = 55/146 (37.67%), Postives = 87/146 (59.59%), Query Frame = 0
Query:  223 AAREGALLAIHAMCEVGGPGAEPSVVSLLPLVLVACGAQAASVRTAAADAGAAVARALNPFAVKVVLPSLRAAVESDTWRVKAGALEVMAIMAESSPAQVAQALPEIVPVVSHQVWDTKKEVQQASKHALLAACACIGNPDIEPLV 368
            AAREGA+  +H + +  G  +EP  + +LP ++     +   V  A      A  +A+NP+A   +LP L   + + +W+ K G L+++  +A ++P QV Q LPEIVP V+  +WDTK EV+QA+K +L   C  I NPD++P+V
Sbjct:   62 AAREGAVFVVHELHKALGLHSEPYFMLMLPALIERYDDKVKGVAAAVDACLMAFFQAVNPYAAATLLPHLFTGMSTISWKTKVGCLKLLGALAHTAPTQVGQLLPEIVPKVTENMWDTKPEVKQAAKSSLGECCTVIHNPDVQPIV 207          
BLAST of mRNA_H-elongata_contig84761.16073.1 vs. uniprot
Match: UPI0014467253 (Elongation factor 3 n=1 Tax=Daldinia childiae TaxID=326645 RepID=UPI0014467253)

HSP 1 Score: 97.1 bits (240), Expect = 1.190e-19
Identity = 62/149 (41.61%), Postives = 89/149 (59.73%), Query Frame = 0
Query:  223 AAREGALLAIHAMCEVG--GPGAEPSVVSLLPLVLVACGAQAASVRTAAADAGAAVARALNPFAVKVVLPSL-RAAVESDTWRVKAGALEVMAIMAESSPAQVAQALPEIVPVVSHQVWDTKKEVQQASKHALLAACACIGNPDIEPLV 368
            AARE A  A+ A+ +     P  EP +V LLPL L A G +   V+ AA  A  A+  A+NP AVK VLP + ++ +ES  W  K  AL+ + I+  +SPAQ+A  +PE++PV+S  +WDTKKEV++ +   +   C  I N DIE  +
Sbjct:   69 AAREKAANAVQAIAQHSEIAPNVEPYLVLLLPLTLAAIGDKITGVKNAAIAATTAIIEAVNPNAVKAVLPVIVKSILESQKWPEKITALDCIDILVRTSPAQLAFRVPELIPVISESMWDTKKEVKERAYKTMEKICELIVNKDIERFI 217          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig84761.16073.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L581_9PHAE1.270e-14159.35ABC protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0... [more]
A0A836CGS6_9STRA2.340e-3546.45P-loop containing nucleoside triphosphate hydrolas... [more]
K0SN41_THAOC7.330e-2544.524Fe-4S ferredoxin-type domain-containing protein n... [more]
B8C3P2_THAPS6.490e-2444.52TOG domain-containing protein n=1 Tax=Thalassiosir... [more]
A0A7S3PWC4_9STRA8.980e-2344.59Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S1VSC1_9STRA1.680e-2244.90Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
F0YQU4_AURAN4.200e-2038.36TOG domain-containing protein n=1 Tax=Aureococcus ... [more]
A0A7S3ZV50_9STRA7.040e-2038.36Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
F0XY24_AURAN9.660e-2037.67TOG domain-containing protein n=1 Tax=Aureococcus ... [more]
UPI00144672531.190e-1941.61Elongation factor 3 n=1 Tax=Daldinia childiae TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 7..118
e-value: 5.4E-6
score: 28.0
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 7..105
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 161..368
e-value: 3.6E-43
score: 150.1
IPR033173Translational activator Gcn1PANTHERPTHR23346:SF7EIF-2-ALPHA KINASE ACTIVATOR GCN1coord: 221..368
NoneNo IPR availablePANTHERPTHR23346TRANSLATIONAL ACTIVATOR GCN1-RELATEDcoord: 221..368
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 214..365

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig84761contigH-elongata_contig84761:187..2491 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig84761.16073.1mRNA_H-elongata_contig84761.16073.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig84761 187..2491 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig84761.16073.1 ID=prot_H-elongata_contig84761.16073.1|Name=mRNA_H-elongata_contig84761.16073.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=368bp
SQGPVAELIAAGKVAMVAGDRSVASQRLQQATKVAPENPKAWRALADFLE
TGNDNKALAEALKACVDIAESKGNFGRSRPVRLRLSEVREAAGDRRGALA
ALKDFTLNPKAMMATTAPPVPSAGPKVSVAARAAAAAAKKDAEVVRDAEN
SVMKDRSTRLFMEINASLRMEALSEHCARLDEPGDAAGRRRAAVAVAKSL
AASNAEAPWVEAQLRELLGGSPAAREGALLAIHAMCEVGGPGAEPSVVSL
LPLVLVACGAQAASVRTAAADAGAAVARALNPFAVKVVLPSLRAAVESDT
WRVKAGALEVMAIMAESSPAQVAQALPEIVPVVSHQVWDTKKEVQQASKH
ALLAACACIGNPDIEPLV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR011989ARM-like
IPR033173Gcn1
IPR016024ARM-type_fold