mRNA_H-elongata_contig84401.16054.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig84401.16054.1 vs. uniprot
Match: A0A835Z5G8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5G8_9STRA) HSP 1 Score: 249 bits (637), Expect = 5.530e-76 Identity = 119/196 (60.71%), Postives = 149/196 (76.02%), Query Frame = 2
Query: 2 RDGIKEMILKPHVFHSQPEFLMIWGVYAVTYVAANMIITTCERTQVDDTWPKLIGTSAVNIASCVAKDLQFTRMFATVKPRPIPASTYLLFTARDGMTVAASFNMPDPASKYLQERLGMSKKTADVTAQLACPAAMQLFSTPLNLLGMDVYNNPNSSAIARGKFIASEYTSSMILRVSRTGPAFGIGGVGNTAFRK 589
R GIKE++++PHVF +PEFLMI+GVY+ TY AN + TTCE +VD WP+ + TSAVN+ SC+AKD FTRMF + P +P STY LFT RD TV ASFN+P P S++LQ + GMSK AD TAQ+ACPAA+Q STPL+L+G+D+YNNP S+A R F+ S+YTSS+ R+ R GPAFGIGGVGNTAFRK
Sbjct: 77 RAGIKELVMRPHVFLRRPEFLMIFGVYSATYTTANAVNTTCEHRKVDSAWPRFLSTSAVNMTSCIAKDRAFTRMFGSSAPMALPLSTYALFTIRDAGTVGASFNLPGPVSEWLQAQ-GMSKARADFTAQMACPAAVQFLSTPLHLIGLDLYNNPKSTARDRWTFMCSKYTSSVAARIGRIGPAFGIGGVGNTAFRK 271
BLAST of mRNA_H-elongata_contig84401.16054.1 vs. uniprot
Match: A0A261XX22_9FUNG (Uncharacterized protein n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261XX22_9FUNG) HSP 1 Score: 205 bits (522), Expect = 1.380e-59 Identity = 103/196 (52.55%), Postives = 126/196 (64.29%), Query Frame = 2
Query: 2 RDGIKEMILKPHVFHSQPEFLMIWGVYAVTYVAANMIITTCERTQVDDTWPKLIGTSAVNIASCVAKDLQFTRMFATVKPRPIPASTYLLFTARDGMTVAASFNMPDPASKYLQERLGMSKKTADVTAQLACPAAMQLFSTPLNLLGMDVYNNPNSSAIARGKFIASEYTSSMILRVSRTGPAFGIGGVGNTAFRK 589
+ G + + LKPH F + +FL I+GVY TYVAAN I TTCE ++D T PK GT+A N+A C+ KD FTRMF TV P +Y LF ARD +TVAASFN P S YLQ+ +K TAD+ AQL CPA +Q STPL+LLG+D+YN N R I EY S + R++R GPAFGIGGVGNT R
Sbjct: 25 KQGFRTLFLKPHRFLASRQFLYIFGVYFGTYVAANTIDTTCEYAEMDSTGPKFFGTTATNMALCILKDRAFTRMFGTVASHSFPLPSYALFAARDSLTVAASFNAPQLVSHYLQKHNISTKHTADIVAQLGCPALVQFVSTPLHLLGLDLYNRSNMKLSDRAGLIRREYLKSTLARIARIGPAFGIGGVGNTLLRS 220
BLAST of mRNA_H-elongata_contig84401.16054.1 vs. uniprot
Match: A0A433PI02_9FUNG (Uncharacterized protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PI02_9FUNG) HSP 1 Score: 192 bits (489), Expect = 1.170e-53 Identity = 96/197 (48.73%), Postives = 131/197 (66.50%), Query Frame = 2
Query: 2 RDGIKEMILKPHVFHSQPEFLMIWGVYAVTYVAANMIITTCERTQVDDTWPKLIGTSAVNIASCVAKDLQFTRMFATVKPRPIPASTYLLFTARDGMTVAASFNMPDPASKYLQERLGM--SKKTADVTAQLACPAAMQLFSTPLNLLGMDVYNNPNSSAIARGKFIASEYTSSMILRVSRTGPAFGIGGVGNTAFR 586
R G++ ++++PH F P+F +I G+Y TY+ AN + TTCE + + + PK + T+ VN++ C+ KD FTRMF RP+P +TY LF +RD +TVAASFN P+ S L R G K++ADV AQLACPAA+Q STP++LLG+D+YN P SA R + EY S I R++R GPAFGIGG+GN FR
Sbjct: 85 RQGLQHLVIRPHRFVVTPQFRLILGLYFSTYLTANAVTTTCEHLERNASAPKFVSTTLVNMSFCIYKDRAFTRMFGLTAARPLPLATYGLFASRDALTVAASFNAPEVVSATLL-RYGAVWDKRSADVVAQLACPAAVQFLSTPVHLLGLDLYNRPGVSAGQRITLVGREYFKSAIARIARIGPAFGIGGIGNAGFR 280
BLAST of mRNA_H-elongata_contig84401.16054.1 vs. uniprot
Match: A0A662XCZ4_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XCZ4_9STRA) HSP 1 Score: 188 bits (478), Expect = 1.070e-52 Identity = 97/204 (47.55%), Postives = 127/204 (62.25%), Query Frame = 2
Query: 8 GIKEM----ILKPHVFHSQPEFLMIWGVYAVTYVAANMIITTCERTQVDDTWPKLIGTSAVNIASCVAKDLQFTRMFATVKPRPIPASTYLLFTARDGMTVAASFNMPDPASKYLQERLGMSKKTADVTAQLACPAAMQLFSTPLNLLGMDVYNNPNSSAIARGKFIASEYTSSMILRVSRTGPAFGIGGVGNTAFRKYFTFVF 607
G+K++ + P F + EFL+I+G+Y+ TYV+AN I T CE + D+ PK IGT+AVN++ C+AKD F RMF + P P ++ LF RD +TVAASFN P +K L++ M A AQL CPAA+Q STPL+LLG+D+YNN SA R F+ EY S+ R+ R GPAFGIGGVGNT FR F
Sbjct: 58 GLKQLAADFVRHPLRFVVKREFLLIFGLYSATYVSANAIDTMCEFAEKDNQMPKFIGTTAVNMSLCIAKDRAFARMFGVIAPAAFPLASIGLFAVRDSLTVAASFNAPKFLAKKLEDDAKMQPSRAGTIAQLVCPAAVQFISTPLHLLGLDLYNNKGLSAAKRASFVQREYLKSVFARIGRIGPAFGIGGVGNTYFRDQLRTTF 261
BLAST of mRNA_H-elongata_contig84401.16054.1 vs. uniprot
Match: A0A8H7S7R9_9FUNG (Uncharacterized protein n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7S7R9_9FUNG) HSP 1 Score: 186 bits (473), Expect = 5.160e-52 Identity = 94/202 (46.53%), Postives = 127/202 (62.87%), Query Frame = 2
Query: 8 GIKEMILKPHVFHSQPEFLMIWGVYAVTYVAANMIITTCERTQVDDT---WPKLIGTSAVNIASCVAKDLQFTRMFATVKPRPIPASTYLLFTARDGMTVAASFNMPDPASKYLQERLGMSKKTADVTAQLACPAAMQLFSTPLNLLGMDVYNNPNSSAIARGKFIASEYTSSMILRVSRTGPAFGIGGVGNTAFRKYFTFV 604
G K +I +P F +F +++G+Y TY+ AN++ T E+ + T W K I TS +N+ C+ KD FTRMF R +P TYL F ARD MTVAASFN P + +LQE M ++ + VTAQLACPA +Q STP++LLG+D+YN PN+++ R I EY S + RV R GPAFGIGGVGNT FR + ++
Sbjct: 57 GFKTIITRPLQFAGSTQFRLVFGLYFGTYLTANVVDTANEQLGITGTTAAWYKFIATSVMNMGVCIYKDRTFTRMFGVTTTRALPKFTYLCFAARDSMTVAASFNAPTYFASWLQENYSMDQRNSKVTAQLACPALIQFISTPIHLLGLDLYNRPNATSNQRVGLIRKEYFKSALARVGRIGPAFGIGGVGNTYFRGFRKYI 258
BLAST of mRNA_H-elongata_contig84401.16054.1 vs. uniprot
Match: A0A8H7U8D9_MORIS (Uncharacterized protein n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7U8D9_MORIS) HSP 1 Score: 186 bits (473), Expect = 9.530e-52 Identity = 95/201 (47.26%), Postives = 128/201 (63.68%), Query Frame = 2
Query: 2 RDGIKEMILKPHVFHSQPEFLMIWGVYAVTYVAANMIITTCE---RTQVDDTWPKLIGTSAVNIASCVAKDLQFTRMFATVKPRPIPASTYLLFTARDGMTVAASFNMPDPASKYLQ-ERLGMSKKTADVTAQLACPAAMQLFSTPLNLLGMDVYNNPNSSAIARGKFIASEYTSSMILRVSRTGPAFGIGGVGNTAFRKY 592
+ G + PH F + +F +++ +Y TY+ AN+I TT E R + K +GT+AVN+ +C+ KD FTRMF TV +P+P +YLLF +RD +T+ +SFN P SKY+Q E + S K +D AQLACPA MQ STPL+LLG+D+YNN NSS+ R I EY S++ RV+R PAFGIGGVGN R Y
Sbjct: 71 KQGFAAFVASPHRFITTRQFRLVFAIYFSTYMTANVIDTTSEFYQREPTETAAAKFVGTTAVNMTACIIKDRAFTRMFGTVASKPLPLFSYLLFASRDSLTILSSFNAPPIVSKYIQTEGILNSSKMSDTIAQLACPAVMQFISTPLHLLGLDLYNNSNSSSGQRLSLIRREYVKSVLARVARIAPAFGIGGVGNNYVRSY 271
BLAST of mRNA_H-elongata_contig84401.16054.1 vs. uniprot
Match: A0A8H7BJY4_9FUNG (Uncharacterized protein n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7BJY4_9FUNG) HSP 1 Score: 185 bits (470), Expect = 2.270e-51 Identity = 96/198 (48.48%), Postives = 128/198 (64.65%), Query Frame = 2
Query: 8 GIKEMILKPHVFHSQPEFLMIWGVYAVTYVAANMIITTCERTQVD---DTWPKLIGTSAVNIASCVAKDLQFTRMFATVKPRPIPASTYLLFTARDGMTVAASFNMPDPASKYLQERLGMSKKTADVTAQLACPAAMQLFSTPLNLLGMDVYNNPNSSAIARGKFIASEYTSSMILRVSRTGPAFGIGGVGNTAFRKY 592
G + + +PH F ++ +I+G+Y TY+ ANM+ TTCE+ VD +W K + T+AVN++ C+ KD FTRMF +P+P +YL F RD MTVAASF P SK LQE+ S+ A V AQL+CPAA+Q FSTPL+LLG+D+YN P ++ R I S Y + + R +R GPAFGIGGVGNT FR Y
Sbjct: 71 GFQTLFTQPHKFVGSIQYRLIFGLYFGTYMTANMVETTCEQRSVDHVTSSWIKFLATTAVNMSVCIYKDRAFTRMFGVSAVKPLPLLSYLFFATRDSMTVAASFIAPPIVSKALQEK-EWSEDHAKVAAQLSCPAAVQFFSTPLHLLGLDLYNRPAATVGQRAGLIRSLYFKTTLARCARIGPAFGIGGVGNTYFRSY 267
BLAST of mRNA_H-elongata_contig84401.16054.1 vs. uniprot
Match: K3WSU5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSU5_GLOUD) HSP 1 Score: 183 bits (464), Expect = 1.240e-50 Identity = 93/204 (45.59%), Postives = 123/204 (60.29%), Query Frame = 2
Query: 8 GIKEM----ILKPHVFHSQPEFLMIWGVYAVTYVAANMIITTCERTQVDDTWPKLIGTSAVNIASCVAKDLQFTRMFATVKPRPIPASTYLLFTARDGMTVAASFNMPDPASKYLQERLGMSKKTADVTAQLACPAAMQLFSTPLNLLGMDVYNNPNSSAIARGKFIASEYTSSMILRVSRTGPAFGIGGVGNTAFRKYFTFVF 607
GIKE+ + P F + EF++++G+Y TY +AN I T CE + D+ PK +GT+AVN+ C+AKD F +MF V P P LF RD +TV ASFN P +K L+ G+ A AQL CPAA+Q STPL+LLG+D+YNN +S AR +F+ EY S + R+ R GPAFGIGGVGNT R+ F
Sbjct: 59 GIKELSKAFVANPFQFVRKREFIIVFGLYTSTYASANAIDTVCEWAEADNQMPKFLGTTAVNMTLCIAKDRAFAQMFGVVAPSAFPIGAIGLFAIRDSLTVGASFNAPKTVAKKLEVDGGVEPSRAKTLAQLLCPAAVQFVSTPLHLLGLDLYNNKGASVAARFRFVQREYLKSAVARIGRIGPAFGIGGVGNTYCRENLRATF 262
BLAST of mRNA_H-elongata_contig84401.16054.1 vs. uniprot
Match: H3GH37_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GH37_PHYRM) HSP 1 Score: 182 bits (461), Expect = 3.310e-50 Identity = 91/198 (45.96%), Postives = 125/198 (63.13%), Query Frame = 2
Query: 8 GIKEM----ILKPHVFHSQPEFLMIWGVYAVTYVAANMIITTCERTQVDDTWPKLIGTSAVNIASCVAKDLQFTRMFATVKPRPIPASTYLLFTARDGMTVAASFNMPDPASKYLQERLGMSKKTADVTAQLACPAAMQLFSTPLNLLGMDVYNNPNSSAIARGKFIASEYTSSMILRVSRTGPAFGIGGVGNTAFRK 589
G++E+ + P F + EF +I+G+Y TY+AAN+ T CE ++D+ PK I T+AVN++ C+AKD F RMF + P P ++ LF RD MT ASFN P +K ++++ M K A AQL CPAA+QL STPL+LLG+D+YNN + R F+ EY S++ R+ R GPAFGIGGVGNT FR
Sbjct: 58 GLRELSADFVRHPLRFVGKREFHLIFGLYTATYMAANVTDTACEYAEMDNQMPKFISTTAVNMSLCIAKDRAFARMFGVIAPAAFPLTSIGLFAVRDSMTCGASFNAPKVLAKKIEDKGLMEKSGAATFAQLVCPAAVQLLSTPLHLLGLDLYNNQGHAVAKRVSFVKREYVKSVLARIGRIGPAFGIGGVGNTYFRN 255
BLAST of mRNA_H-elongata_contig84401.16054.1 vs. uniprot
Match: A0A8H7PPD2_9FUNG (Uncharacterized protein n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7PPD2_9FUNG) HSP 1 Score: 182 bits (462), Expect = 3.760e-50 Identity = 93/201 (46.27%), Postives = 130/201 (64.68%), Query Frame = 2
Query: 2 RDGIKEMILKPHVFHSQPEFLMIWGVYAVTYVAANMIITTCERTQVDDTWP---KLIGTSAVNIASCVAKDLQFTRMFATVKPRPIPASTYLLFTARDGMTVAASFNMPDPASKYLQ-ERLGMSKKTADVTAQLACPAAMQLFSTPLNLLGMDVYNNPNSSAIARGKFIASEYTSSMILRVSRTGPAFGIGGVGNTAFRKY 592
+ G +P F + +F +++ +Y TY+ AN+I T+CE D T K +GT+AVN+++C+ KD FTRMF TV +P+PA +YLLF ARD +T+AASFN P S+++Q E + S K +D +Q+ACPA MQ+ STPL+LLG+D+YNN +S+ R I EY S++ RV R PAFGIGGVGN R Y
Sbjct: 70 KQGFATFFSQPLHFITTRQFRLVYAIYFSTYLTANVIDTSCEHLSRDKTQTSAAKFVGTTAVNMSACIYKDRAFTRMFGTVATKPLPALSYLLFAARDSLTIAASFNAPPIVSQWIQTEGILNSTKASDTLSQIACPALMQVLSTPLHLLGLDLYNNSSSTTGQRFSLIRREYVKSVLARVGRIAPAFGIGGVGNNYVRSY 270 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig84401.16054.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig84401.16054.1 >prot_H-elongata_contig84401.16054.1 ID=prot_H-elongata_contig84401.16054.1|Name=mRNA_H-elongata_contig84401.16054.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=199bp MILKPHVFHSQPEFLMIWGVYAVTYVAANMIITTCERTQVDDTWPKLIGTback to top mRNA from alignment at H-elongata_contig84401:279..2680- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig84401.16054.1 ID=mRNA_H-elongata_contig84401.16054.1|Name=mRNA_H-elongata_contig84401.16054.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2402bp|location=Sequence derived from alignment at H-elongata_contig84401:279..2680- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig84401:279..2680- >mRNA_H-elongata_contig84401.16054.1 ID=mRNA_H-elongata_contig84401.16054.1|Name=mRNA_H-elongata_contig84401.16054.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1194bp|location=Sequence derived from alignment at H-elongata_contig84401:279..2680- (Himanthalia elongata Himel1 dioecious)back to top |