mRNA_H-elongata_contig8298.15934.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig8298.15934.1
Unique NamemRNA_H-elongata_contig8298.15934.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8298.15934.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig8298contigH-elongata_contig8298:329..9224 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons7
Model size3435
Cds size1797
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931236.575621-UTR-H-elongata_contig8298:328..16971622931236.575621-UTR-H-elongata_contig8298:328..1697Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig8298 329..1697 -
1691679754.116068-UTR-H-elongata_contig8298:328..16971691679754.116068-UTR-H-elongata_contig8298:328..1697Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig8298 329..1697 -
1622931236.6772027-UTR-H-elongata_contig8298:4867..49061622931236.6772027-UTR-H-elongata_contig8298:4867..4906Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig8298 4868..4906 -
1691679754.1780145-UTR-H-elongata_contig8298:4867..49061691679754.1780145-UTR-H-elongata_contig8298:4867..4906Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig8298 4868..4906 -
1622931236.695383-UTR-H-elongata_contig8298:7856..79971622931236.695383-UTR-H-elongata_contig8298:7856..7997Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig8298 7857..7997 -
1691679754.1918688-UTR-H-elongata_contig8298:7856..79971691679754.1918688-UTR-H-elongata_contig8298:7856..7997Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig8298 7857..7997 -
1622931236.717191-UTR-H-elongata_contig8298:9135..92241622931236.717191-UTR-H-elongata_contig8298:9135..9224Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig8298 9136..9224 -
1691679754.2034888-UTR-H-elongata_contig8298:9135..92241691679754.2034888-UTR-H-elongata_contig8298:9135..9224Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig8298 9136..9224 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931236.5882356-CDS-H-elongata_contig8298:1697..17101622931236.5882356-CDS-H-elongata_contig8298:1697..1710Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8298 1698..1710 -
1691679754.128726-CDS-H-elongata_contig8298:1697..17101691679754.128726-CDS-H-elongata_contig8298:1697..1710Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8298 1698..1710 -
1622931236.6042752-CDS-H-elongata_contig8298:2028..27651622931236.6042752-CDS-H-elongata_contig8298:2028..2765Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8298 2029..2765 -
1691679754.1369593-CDS-H-elongata_contig8298:2028..27651691679754.1369593-CDS-H-elongata_contig8298:2028..2765Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8298 2029..2765 -
1622931236.625427-CDS-H-elongata_contig8298:3083..39501622931236.625427-CDS-H-elongata_contig8298:3083..3950Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8298 3084..3950 -
1691679754.1451108-CDS-H-elongata_contig8298:3083..39501691679754.1451108-CDS-H-elongata_contig8298:3083..3950Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8298 3084..3950 -
1622931236.6419733-CDS-H-elongata_contig8298:4298..43761622931236.6419733-CDS-H-elongata_contig8298:4298..4376Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8298 4299..4376 -
1691679754.1529207-CDS-H-elongata_contig8298:4298..43761691679754.1529207-CDS-H-elongata_contig8298:4298..4376Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8298 4299..4376 -
1622931236.6564775-CDS-H-elongata_contig8298:4765..48671622931236.6564775-CDS-H-elongata_contig8298:4765..4867Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8298 4766..4867 -
1691679754.1607-CDS-H-elongata_contig8298:4765..48671691679754.1607-CDS-H-elongata_contig8298:4765..4867Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8298 4766..4867 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig8298.15934.1prot_H-elongata_contig8298.15934.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig8298 1698..4867 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig8298.15934.1

>prot_H-elongata_contig8298.15934.1 ID=prot_H-elongata_contig8298.15934.1|Name=mRNA_H-elongata_contig8298.15934.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=599bp
MVAEREQLQAQMSLLRVADDDPEGAVMPVTRNNQTGQPVGGAEGVGGGRG
GGTGKDKRNKAKKQQQQQQRHQQKRGVAKGIGSAGAASGDRGATTSGNQG
KQHAHAAAPSKTTTRIIGSRITAAPKDFGGGGGGDDGGPGESANDYGADT
ASAVIEGTINQFTDSAHAHPQHLQSQLSPLLAPKTVVGAVAAAMHGASQS
SSMCPTDSQQKQQQQHQQPQHVPPGPIAPPHTARNSSSLPTAMVVTSGSH
VSQHAAVCIAASLTTDTMVTTSGLTPGVIGAVGPEDTVIVKAGLSPSSAS
TSVPGIVAGAAAAEGSGGVISLVAANFCAFCGGRLVAVTANFCAFCGQRV
IRNPEDFERGTSPPLPSGAGRVIPTSRQQQQQPSPQAQQPLLSRAVLPPH
QHGPVGGERGKQVYGKPPPQQKLQPQANTTSSPSRGTNVSATSAAYLGQD
LMPISNSAVAGGSSGAGGLGSGGAGAGGSGAGGDEDEGGGSGVGGVGHGD
GAGAGSGSGSLPFFQQFRGEKGNGERGGGASHGATVSVAPGAGCPARGGG
GHVAGAGATAPGGGGGSSTFKGILEDVIGPLGRGNGKGDDVSDVRNPW*
back to top

mRNA from alignment at H-elongata_contig8298:329..9224-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig8298.15934.1 ID=mRNA_H-elongata_contig8298.15934.1|Name=mRNA_H-elongata_contig8298.15934.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=8896bp|location=Sequence derived from alignment at H-elongata_contig8298:329..9224- (Himanthalia elongata Himel1 dioecious)
AGGCTGAAGCTGGAGGAGGCGTTGACGAGGAGGGGACGGCTTCGAAGCGC CGCACCAAAAAGGCCAAAAAGAAGGAAAGGGACAAGAAGGTCGGTCATAT CCCGAAACCCTCGCGTCATCAAGAGACGAGAAAAAGCATCGCGTGGCATT TTTACAATCGATGAAAATATGGTGTAGCCATGGTTACAAGTGCCGCAACA GTTTCGCGTGCATACATGTTGACGCCGTGCAGGCAGCAGACGATATCCGA TATGCATGCTTCGCTATGCTTGTGTCTTATTTATCTCTTTCTGTTTCATA TGTGTACTATGTATGCGTGCATTGTGCGTTTTGGGTTTATTTTTATTTAA AAGACTTTAAGCTCATTTGTTGCATTGTGTGTGTATCTTGTGCATCGCGT ACGTGTTGTGTCCTGTCCTCTTGAGATTAAAATGTCCTCTTTCTCCTCGG AATGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTCGTTATTTTTT GTTCTTATCTATTGTTTTCCCCCCGTTTGGAGGTCCCTCCCAANNNNNNN NNNTTTTGTGATGTTTTGTGTTTTTGTTGTGTGGGGGGGGGGTGGGGGGT GGGGGGGGGGTGGGGGGGGGGTGGGGTGATTCGTTATATTTCGATCGTAC TCGATTGATCTCACCCGTTCGACAGTCCCTTCCAAAATATGCTTATTATA TTGGCTTCCCGCCCCTGCCCCTCCCCATGCCGTATCGTCCCATCCCGTAT CGTTCCATCCCGTATCGTTCCGTTCTGTCCCTTCCACACGGAAAAATAAC CCAATATTTGACTTACAAACATGAACCAGGGTATTTCTTTGTGGAGGTGC CGCTTTTTCCGAGTTGTAGCATGAAGAGTACGCTGTGTATGTTTCCATTC CGGATGGTGTTTTTTTCTATCTTGTGACCACGGGCTGGATTTTGACATGA TCTTTTATGATAACTCAATCAATCAATAGATAAATAAATCAAACATGTGA CGATTTTGTGCTCAAAGTTAATGATGTACACAGTCGAACCTGACAACAGC TGGTCCCCTGGACTACCCCTCTCACGGTGCTAAGAAGGTGTGGATGTTCG GAGGGTTGGAATGAGTTATTAATTTTTTTTTAAAATATTCCCACACAACA AAATATCAAACAAAATGTAAAACAAAACCCGAACCCCCCCCCCCCCCCCC TCCTTATCCCCCCTCCTTATCCCCCAGCGTCGCGAAGACGAAAAGCGTCT CCAGCAAAAAGAGGGGGAAAGAAAGGAACAGCTCCGTCTTGAGAAGGTAA GGCTTGCGGAGGAGCGGCTCGAAGAGGAGAGGCGGGCCAAGCTTCTCCAG GAGCGGGCAGAGCACGAGGTAGGTTAGCGTGACATCACCTTTCCGCGATT TGGGGGGCAAAAAGCGCCAGTTAAAAATCTCCGGATAATGAATGGACCCA TCGGCAGAAAGCGAAATTAAACAAATAACCCGCTATGGTGCTTACGAAAA GGCGTGGATTTTTGGAGAGTTGGAATTAGTTTATGTTGTTTTTAAAAATA AAAACACGAGGTGATTTCCGACGAAGCAACCCCGATATTTCGTTTAACGA CTTGAAAACGTGTACGTCGTATGCCATCCGTATGAGATTGATGTACTTGC GCTGTCATTATTATCATCTAGAAAGCATTGGCACGAAGTGCCTCGAGTTG AGCCGTAATTCACTCCAATAATTATAAACTCTTTAAAAGGCAGGCTCTCG GCCTTAGTGTTATACGTGTGTTATCTATTTTTTCAAATTTTACACGACAG TCATAATTTCCGCCTTTTCAAAAAGATACCTCTATTAACCCTTTCGGAAC TGGATTTCAATTTTTTATATCGGAGTTAGAATATAAAAAACAGATAGAGT TCCATAGGGGGTTAATATAGTATTTATACAGTATTCATACAGTATTAATA GTTGTAGTCCCTATTAATATTCATAAATATCTGGTCCGAAATATAAGGAT CGTTTGGACCCAAGAATCCTGACAAGTTTCGCCTGGCGAATAAGGCAGTG CGCGAAAGAGCTGCCGCTATGGAACAAATCAACCGATATGCCCAAATACG GAGGCGTTATTCATGTCGGGGAGAGGAGAGAAATTGCGGCAGGTGGAATT GCGGTCGACCTGCAGGTAGGCAGGGAGTTATAGTACACCGCCGGGTGCAA AAGTTATCCCCCCTCCCCCCCCTGAGTTTACTATAATAACGCCTCCGATA CTGTTTGTAGTATACTGTACTGTATCGCACATCTTCACAGTAACCAATAG TGGGTGTGGGAAAATAAAGGCGCAAAAAAAATGGTCCATGGGGTTACCTG AATAAGATGCACCCGTTACTCAAGCTACCTTGAGGACTGCTGACTCAGTG CCGGCGGACTCTCGGTAGTAAACGCCGTCGGTACGCAATTGTGTGATCTG ATGAAATCGGGATTGGACCCGATGGCGGTTAACGGTAGAGATGGACGCCG TCGCGGAAAACGAGAGGATCGAGAGGATCCCGAGAGTAAGCACCAGATTC AGCCTGGGTTGGGAGAATGAGCAGGCTGACGCAGGACGGGACGGCCGAAC CCGTTTCGCGAGACCAAAATTCCAGACACGAACGGGGACAGGGGACATGG AAAGGTCTAATACAATCTGAAAATTCATTTTTCTTAAAAACATATGAACT CATTCAAACCCTCAACTCATTCAACTCATTCAAACATTCAACTCATTCAA CTCATTCAAACCCTCAACTCATTCAACTCATTCAACTCATTCAAACCCTC CGAACACCAACGCCTTCTAAGTACCGCGAGAGGTTCATTTCAGGGGACAC AACTATCGTCAGATTCGAATGGTTTGATTACTACCTTTGAGCACAAAATC ACGAAAGGTTCAATGGTTTGAGGGCAGTTCCCTGCACTCTACATCATGGA ACACCCTGCCTAGAAGCGATACCTCCCCCCGACCCCACCCCTTTTCCTTA GATAACACACTGCGGGGGTGCAAATCCAAGGGGTTTCACCGTGGATGTAT TCAACGGGGATTACGCTAACCACCCCCTCTCGCGGGGGAGAGTGTCTGCG TTTTGAAGGGGGGTTTTTGTTACAAGTCTCTCGGCGTTGCCAGTTTTTAA ACATTAGACATGAAGGTAACACACACACACACAAACATTCTTTGTCACGT CTGATCATGAATAGAGGTGTTTGTAGCAAATATGATTGAATCCCCCATTG GGAGGATCAATGCGAGAGTAGCCTACAAGAGCTAGCATGACAGAGAGGGC CGGATTGCGCGGTTATGTGTAATTTAATAAATAAACACATACACATACAC ACAAGTATTTGAGTTGCGGTGGATCGGTTAGGGTAAGGTAAGGTCGCCAT ATAGTATTTTATCACATTGCCATCGGCGGTTGCTGAAAAGGAAAAGGAAA TGAAAATGATTGATTTGCGATCACAAAGCGAGAGAAAGAGATGAGAAGAA AAGTCGTCTTGTCTTGTCTTGTCTTGCCCCAGGCGTGGGCACGGTGATGA TGATATGCTGCATCCTCTGTGTGACGCCATTCAATAGAGGGGTGCTACTA TTAATAGTAGCCCTACCTCTCTGATGGTCATGGTGGCCAAACTCTGGTAA TACCATATTAGATATCATCACTTTCTGCCGATGTTATCGTTCAACCTTCA GCCTTCTAGATTATAACCCCCCCCCTACCCCCCTACCCCAAAGCTGTCCC ATACCGCCTGCGTTTCAGGGGATCATCCCGTCTCTCCCCGGTTCGTTAAC GCCTATGGAGTTTTAGGGATCGCGATGCGAGCGCGATATAAACAGCACTT CTGCTTGTACACCTCGTCAACTATTACAATGGTTGGAATTTTGCCTACTA TACTCCCGTTTTTTCTTCTTCTCTTCTTAACCCGTTTTAATATTCATACG ACCGCTATAATATTATATCCTACATCAATAGTGTACTATTAATAGTACAA AAACAAAATAATCAATAATCTTGGTGGGGTTCGAACCCATGACTTCCGCA CTATATAGTTTAGCAGGCAGCAAGCAGCAGGCTATAGTCGTATATAGTCG TCACTCGAGCAACAAGCATCGAAGGAAAAACTTAATCGAAGCTAACGAAC GACCAAACGATCCACCCTAATAGCTACCTGATGCACTCGTGTGTTCCAAG GTGCGTATTCCGCTCCGTCCCATGCCGTCCTGTTCAATCCATCTCATTCC GTCTCGTCCGCTTCTTTTTCCGTTCTACCGTTCCATTTTATGCCATACTC CACCGCGCGCGGCGGCAGAGGCAAGAGCAACTCTGGAAGCTGGCCCAGGA GAAACGCATGGTCGCCGAGAGAGAGCAGCTGCAGGCGCAGATGTCGCTGC TCAGGGTGGCGGACGACGATCCCGAAGGGGCGGTGATGCCGGTGACGAGA AACAACCAGGTGAGAGAGACACGGGTGTCCCGGGTTCGATTATGGGGCGG CATCGCCTGTCCTGTGGAACCGCAGTGTGGCGCGGTGTATCTTGAGTTGT GACGTTGTGTGTGCGTTTTGAGGGTGCCGTAGTGCGCCTTTTAAAGCATG GCACCTCGAAGTGCATGTTTGACAGAGTGCCTCCCGCTTCGTTCGTGTGC TTTTTCAAGTGCGTCGCTTTTTAGGGTTAGTGTTAGGGTTAGTGCTAGTC TGGAGTGTTTTAGTTTTTGGCGCTATAGAGTGTCGTTACTCTTTTATTTG GGCATTGTCATTGGCATCGACTGGGTTAGAGGCTTGCGCGGGTGGTGTGC ACCATCCGAATCGCAGTTTGAATGAAAAAAATCTGGACTGCTACGCAGAC TGGGCAACCTGTTGGAGGAGCCGAAGGCGTGGGAGGAGGCCGAGGCGGAG GGACAGGGAAGGACAAGAGAAACAAGGTGTGTAATTGGCAGATGGATTGG AGGGTAGGGGTGGGGTAAAGCGATACATGGTGCTGCGTTGGCTGTGTGTG TGTTATGTTGTGTGCCTCAAACGGTGGATATTTGAAGCCTCGGTAAAGTT GGATGCTCATATCTGCGGGATTTTTTTTGGCTTGGAGGAGAGTGAGTTCG GGTCGGTTTTGGTTACACAGCTTCCGTTCGTCGTGCGTCTGTCGCGAGCC TCTGCGGTAGAGGTCAGGCCTGAGTGGGCAGCACAAAACGGTTGGAAGGC GATGATGACGCTATCGTTTCTAGTGGCGATGGCACTGTTGTCTGATGCTC CGCTTCATCTCGCTGTTCCGATAGGCCAAGAAGCAGCAGCAGCAGCAGCA GCGTCATCAGCAAAAGCGTGGGGTGGCCAAGGGCATCGGGTCCGCAGGGG CTGCTTCTGGTGATCGAGGTGCAACTACCAGCGGAAATCAAGGGAAGCAG CATGCTCACGCAGCCGCGCCATCGAAGACCACGACCAGGATTATAGGGAG TCGCATTACGGCTGCGCCAAAGGATTTTGGCGGCGGTGGTGGTGGTGATG ATGGTGGACCCGGAGAAAGCGCTAACGATTACGGTGCTGATACTGCCAGC GCGGTCATCGAAGGCACCATTAACCAGTTCACGGACAGTGCGCACGCTCA CCCGCAGCATCTTCAGTCCCAACTCTCGCCCCTTCTGGCTCCGAAGACTG TCGTCGGAGCTGTGGCAGCGGCGATGCATGGCGCGTCTCAGTCGTCGTCC ATGTGCCCCACCGACTCTCAACAGAAGCAGCAACAGCAGCATCAGCAGCC ACAGCACGTTCCGCCCGGCCCGATCGCCCCGCCCCACACGGCACGAAACT CATCATCCCTCCCGACGGCGATGGTGGTGACATCCGGCAGTCACGTGTCC CAACACGCCGCGGTCTGCATCGCCGCGTCGCTGACGACGGACACGATGGT GACAACCTCCGGGTTGACGCCGGGGGTCATCGGTGCCGTAGGCCCGGAAG ACACAGTGATCGTGAAAGCCGGGCTGTCACCGTCTTCGGCTTCCACTTCG GTGCCCGGGATCGTTGCCGGGGCGGCGGCGGCGGAGGGATCGGGTGGAGT GATTTCTCTCGTGGCGGCGAACTTCTGCGCATTCTGCGGCGGACGGTTGG TTGCTGTTACCGCCAACTTCTGTGCCTTCTGCGGTCAGCGGGTGAGGTCG GGAAGAGAGGGCGGCGGGGAAGGCTATGTTGTGGGGTGGTGGTTGTGTGC GAAGGGATTGACCTCGGGGTCGCCTTGCTTCGTGGGAATGAGGTGTTTCC CCGGCGCCGCTTGTCTTTTCGTGTGGGCCTAGCGTGTATTATTATTGGCC ATTTTCTAAACACCGCCACCGCTCTGCGACCTTGGATCGATGCAAGACGA GGTCAATCATGCAGCATCCAGTGGGTGTTTGTGAGGCAACCTGGTGAACC ATAAATGCTCGTGACGTGTAACCCCACCTGGTTTCCTCGGATTCGCACGC CCCGCACAGGTCATACGAAACCCGGAGGACTTCGAGCGCGGCACCTCTCC CCCCCTTCCTTCTGGCGCCGGCCGCGTCATACCTACCTCTCGGCAGCAGC AGCAGCAACCGTCGCCGCAAGCCCAGCAACCTCTTCTATCGCGCGCCGTC CTCCCGCCTCATCAACACGGCCCTGTCGGCGGCGAGCGGGGAAAGCAAGT TTACGGCAAGCCGCCGCCACAGCAGAAGCTGCAGCCACAAGCGAACACAA CTTCCAGCCCTTCGCGAGGCACGAACGTCTCCGCCACCAGCGCGGCCTAC CTCGGACAGGACCTAATGCCCATTTCCAACAGTGCTGTCGCGGGTGGTAG CAGCGGTGCGGGAGGCCTTGGCAGCGGCGGCGCGGGTGCAGGGGGTAGCG GTGCAGGTGGAGACGAAGACGAAGGCGGAGGAAGTGGCGTTGGCGGGGTC GGCCACGGGGATGGCGCCGGCGCCGGGTCAGGCAGCGGGTCCTTGCCTTT TTTTCAGCAGTTTCGAGGAGAGAAAGGCAACGGCGAGCGTGGTGGCGGTG CTTCCCATGGCGCTACCGTCAGCGTGGCTCCTGGAGCGGGGTGCCCGGCT CGTGGTGGAGGGGGACATGTCGCGGGAGCCGGGGCGACCGCACCAGGCGG AGGCGGCGGGAGTTCCACCTTTAAAGGCATTCTGGAGGACGTGATCGGGC CTCTCGGGCGGGGTAATGGGAAGGGTGACGACGTGAGCGATGTGAGGTAA ACAGAGGAATGACGGAAAAGCCGCGCACGGGGTAGACGTAATCATCGTTC TTTACTTGGCATCATGTGCGTTGTCGTGATTATTCGTTCTGTAGTTACCG TAAGGTAGCTGATACGAGAGCGATGGAATGGTTGGTAGACGGGCTTGAGG ATGGTGACCGCAGATATGTTTTCGTAAAGTGATTCCCACGCAGTGGCTTG TGTTGCAAGGGAAAAAAATGGCCGCGCGATCGTCTCTTCGAATGACGTCA TTGGTCTTTCCGCCTGTGTGTGTGTCCCGCGTGCATACATTGCCCCCCTC CCCCTACCCCCCAGAAATCCGTGGTAGCTGGGCGCCTGCTGCAAAATGCT TCAAGCAGTACACCCCAAATATCTTTCACCTTTTGGCGTCGGCGAAAAAA TCCTTTGATTGCGGTGAGTGAGTCACCTCCCTGCCGCGGGACGCCTCGAA CGGACGAGCGAGAAGGAGAACGGACGGAAGGTCTGCGTATTCGCAGCGTC GTCGGAAAGCATTTTTAGTGAGGGCACGGATAAGAGGTGGTTTTTTGCCA CTGCGCTCACTCGCTGCACCTCGGTCGCCCTGCGTGTGCCTTGTTTGGGT TCGCGATTTTGTGACCGTTTGGCAACAACGCTGTTTCTTGGGAAACGAGA CAGGGAAGTAAGTGCTTCGGCGAACGAGCCCGGGATGTGCGCCGCAGCAT AGGTGATAGGCCATCTGGCTGCGCCGAGGCTTGGGAGACGGATATCCAGT GTTGATTTAAGATAAGAAAGGCATGCCGCCCAGTATGTCTGGTTGCTGTT GTTATCCGTCAAGATAGGGGTTTTCCCGACTTGGGAGGCGTGAAGAGTCC GCCGTGGAGGTATCGATATCGCGTCTTTTTCCCTTCCCCCCCCATCCTCC CCCGTCGGTGGTCGACCGAAATGTCGTCCTTGTACTCACAAAACACGAGG ACGAACAGCTATCGAGCTGATGCTTTGACCTACGAACGAAGGAGGGTGCC CTTAGAGTTGCTTCAATGGTCAATGGTCGAGCGCGCACGAAGAGAGGGAA GAAAGACGAAGCAAAGCCGTAATTTCCCCCCGATGATCCTGCTTCTATTA CCCCTGATGATCCTTTTGCTTTTATTACCACCCCTGATGATCCTGCTTTT TTATGACCCCAATCTCGTCCTTCTTCCTTCGACCGACGATCGAAATGAAA AGCGTCGGGGACTTTCTATTACCGCCCCCATGAACACCTTTTGGTAAAAT CTATCTCTTATCTAGTTTCTTTCTCTCGATTGCTTTACTGCTGCCGCGGG CTTCTGATCGAACGGTGCACACGATGCGGGCGTCGGTAATACTTGCGGCA GACAAGGCCAGTGTGATATATATATGACCCTTCATAGTGCTGAACTCCCG AGAGATGAACTACTTTGTATCTCACGCTTTAAATCTCCGGCGGTATAGTG GTTGATTGTGGTGTATGACCCTCTAACGGCCTCGCTATGGATATGTGCTC TTTTTTCTTTTCCCTTCTGATGAAAGTTGGTCATAGTCCCCCTGACTGTC ACTTGTCGTGTAATGAAGTATATAGGATATAGTGTGGATGCTCGGAGGTT TTGATGAGTTCATATGTTTTTTAGGGAAAAAAAGAAGCTGATGTACATCG TTTTTTCTTTAGGTCCACCTAAGATAAAATTTTCTGAAACATTTTT
back to top

Coding sequence (CDS) from alignment at H-elongata_contig8298:329..9224-

>mRNA_H-elongata_contig8298.15934.1 ID=mRNA_H-elongata_contig8298.15934.1|Name=mRNA_H-elongata_contig8298.15934.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3594bp|location=Sequence derived from alignment at H-elongata_contig8298:329..9224- (Himanthalia elongata Himel1 dioecious)
ATGGTCGCCGAGAGAGAGCAGCTGCAGGCGCAGATGTCGCTGCTCAGGGT
GGCGGACGACGATCCCGAAGGGGCGGTGATGCCGGTGACGAGAAACAACC
AGATGGTCGCCGAGAGAGAGCAGCTGCAGGCGCAGATGTCGCTGCTCAGG
GTGGCGGACGACGATCCCGAAGGGGCGGTGATGCCGGTGACGAGAAACAA
CCAGACTGGGCAACCTGTTGGAGGAGCCGAAGGCGTGGGAGGAGGCCGAG
GCGGAGGGACAGGGAAGGACAAGAGAAACAAGACTGGGCAACCTGTTGGA
GGAGCCGAAGGCGTGGGAGGAGGCCGAGGCGGAGGGACAGGGAAGGACAA
GAGAAACAAGGCCAAGAAGCAGCAGCAGCAGCAGCAGCGTCATCAGCAAA
AGCGTGGGGTGGCCAAGGGCATCGGGTCCGCAGGGGCTGCTTCTGGTGAT
CGAGGTGCAACTACCAGCGGAAATCAAGGGAAGCAGCATGCTCACGCAGC
CGCGCCATCGAAGACCACGACCAGGATTATAGGGAGTCGCATTACGGCTG
CGCCAAAGGATTTTGGCGGCGGTGGTGGTGGTGATGATGGTGGACCCGGA
GAAAGCGCTAACGATTACGGTGCTGATACTGCCAGCGCGGTCATCGAAGG
CACCATTAACCAGTTCACGGACAGTGCGCACGCTCACCCGCAGCATCTTC
AGTCCCAACTCTCGCCCCTTCTGGCTCCGAAGACTGTCGTCGGAGCTGTG
GCAGCGGCGATGCATGGCGCGTCTCAGTCGTCGTCCATGTGCCCCACCGA
CTCTCAACAGAAGCAGCAACAGCAGCATCAGCAGCCACAGCACGTTCCGC
CCGGCCCGATCGCCCCGCCCCACACGGCACGAAACTCATCATCCCTCCCG
ACGGCGATGGTGGTGACATCCGGCAGTCACGTGTCCCAACACGCCGCGGT
CTGCATCGCCGCGTCGCTGACGACGGACACGATGGTGACAACCTCCGGGT
TGACGCCGGGGGTCATCGGTGCCGTAGGCCCGGAAGACACAGTGATCGTG
AAAGCCGGGCTGTCACCGTCTTCGGCTTCCACTTCGGTGCCCGGGATCGT
TGCCGGGGCGGCGGCGGCGGAGGGATCGGGTGGAGTGATTTCTCTCGTGG
CGGCGAACTTCTGCGCATTCTGCGGCGGACGGTTGGTTGCTGTTACCGCC
AACTTCTGTGCCTTCTGCGGTCAGCGGGCCAAGAAGCAGCAGCAGCAGCA
GCAGCGTCATCAGCAAAAGCGTGGGGTGGCCAAGGGCATCGGGTCCGCAG
GGGCTGCTTCTGGTGATCGAGGTGCAACTACCAGCGGAAATCAAGGGAAG
CAGCATGCTCACGCAGCCGCGCCATCGAAGACCACGACCAGGATTATAGG
GAGTCGCATTACGGCTGCGCCAAAGGATTTTGGCGGCGGTGGTGGTGGTG
ATGATGGTGGACCCGGAGAAAGCGCTAACGATTACGGTGCTGATACTGCC
AGCGCGGTCATCGAAGGCACCATTAACCAGTTCACGGACAGTGCGCACGC
TCACCCGCAGCATCTTCAGTCCCAACTCTCGCCCCTTCTGGCTCCGAAGA
CTGTCGTCGGAGCTGTGGCAGCGGCGATGCATGGCGCGTCTCAGTCGTCG
TCCATGTGCCCCACCGACTCTCAACAGAAGCAGCAACAGCAGCATCAGCA
GCCACAGCACGTTCCGCCCGGCCCGATCGCCCCGCCCCACACGGCACGAA
ACTCATCATCCCTCCCGACGGCGATGGTGGTGACATCCGGCAGTCACGTG
TCCCAACACGCCGCGGTCTGCATCGCCGCGTCGCTGACGACGGACACGAT
GGTGACAACCTCCGGGTTGACGCCGGGGGTCATCGGTGCCGTAGGCCCGG
AAGACACAGTGATCGTGAAAGCCGGGCTGTCACCGTCTTCGGCTTCCACT
TCGGTGCCCGGGATCGTTGCCGGGGCGGCGGCGGCGGAGGGATCGGGTGG
AGTGATTTCTCTCGTGGCGGCGAACTTCTGCGCATTCTGCGGCGGACGGT
TGGTTGCTGTTACCGCCAACTTCTGTGCCTTCTGCGGTCAGCGGGTCATA
CGAAACCCGGAGGACTTCGAGCGCGGCACCTCTCCCCCCCTTCCTTCTGG
CGCCGGCCGCGTCATACCTACCTCTCGGCAGCAGCAGCAGCAACCGTCGC
CGCAAGCCCAGCAACCTCTTCTATCGCGCGCCGTCCTCCCGCCTCATCAA
CACGGCCCTGTCGGCGGCGAGCGGGGAAAGCAAGTTTACGGCAAGCCGCC
GCCACAGCAGAAGCTGCAGCCACAAGCGAACACAACTTCCAGCCCTTCGC
GAGGCACGAACGTCTCCGCCACCAGCGCGGCCTACCTCGGACAGGACCTA
ATGCCCATTTCCAACAGTGCTGTCGCGGGTGGTAGCAGCGGTGCGGGAGG
CCTTGGCAGCGGCGGCGCGGGTGCAGGGGGTAGCGGTGCAGGTGGAGACG
AAGACGAAGGCGGAGGAAGTGGCGTTGGCGGGGTCGGCCACGGGGATGGC
GCCGGCGCCGGGTCAGGCAGCGGGTCCTTGCCTTTTTTTCAGCAGTTTCG
AGGAGAGAAAGGCAACGGCGAGCGTGGTGGCGGTGCTTCCCATGGCGCTA
CCGTCAGCGTGGCTCCTGGAGCGGGGTGCCCGGCTCGTGGTGGAGGGGGA
CATGTCGCGGGAGCCGGGGCGACCGCACCAGGCGGAGGCGGCGGGAGTTC
CACCTTTAAAGGCATTCTGGAGGACGTGATCGGGCCTCTCGGGCGGGGTA
ATGGGAAGGGTGACGACGTGAGCGATGTGAGGTCATACGAAACCCGGAGG
ACTTCGAGCGCGGCACCTCTCCCCCCCTTCCTTCTGGCGCCGGCCGCGTC
ATACCTACCTCTCGGCAGCAGCAGCAGCAACCGTCGCCGCAAGCCCAGCA
ACCTCTTCTATCGCGCGCCGTCCTCCCGCCTCATCAACACGGCCCTGTCG
GCGGCGAGCGGGGAAAGCAAGTTTACGGCAAGCCGCCGCCACAGCAGAAG
CTGCAGCCACAAGCGAACACAACTTCCAGCCCTTCGCGAGGCACGAACGT
CTCCGCCACCAGCGCGGCCTACCTCGGACAGGACCTAATGCCCATTTCCA
ACAGTGCTGTCGCGGGTGGTAGCAGCGGTGCGGGAGGCCTTGGCAGCGGC
GGCGCGGGTGCAGGGGGTAGCGGTGCAGGTGGAGACGAAGACGAAGGCGG
AGGAAGTGGCGTTGGCGGGGTCGGCCACGGGGATGGCGCCGGCGCCGGGT
CAGGCAGCGGGTCCTTGCCTTTTTTTCAGCAGTTTCGAGGAGAGAAAGGC
AACGGCGAGCGTGGTGGCGGTGCTTCCCATGGCGCTACCGTCAGCGTGGC
TCCTGGAGCGGGGTGCCCGGCTCGTGGTGGAGGGGGACATGTCGCGGGAG
CCGGGGCGACCGCACCAGGCGGAGGCGGCGGGAGTTCCACCTTTAAAGGC
ATTCTGGAGGACGTGATCGGGCCTCTCGGGCGGGGTAATGGGAAGGGTGA
CGACGTGAGCGATGTGAGAAATCCGTGGTAGAAATCCGTGGTAG
back to top