prot_H-elongata_contig8292.15929.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig8292.15929.1
Unique Nameprot_H-elongata_contig8292.15929.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length47
Homology
BLAST of mRNA_H-elongata_contig8292.15929.1 vs. uniprot
Match: A0A6H5JPB0_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPB0_9PHAE)

HSP 1 Score: 62.4 bits (150), Expect = 1.780e-10
Identity = 33/47 (70.21%), Postives = 39/47 (82.98%), Query Frame = 0
Query:    1 LANLARRVLAIPASQAQSERLFSSTGLIVSKRRNRLSPEHVQLLVFV 47
            LANLARRVLAIPA+QA+SERLFS  G IV+K RN L+P  V+LLV +
Sbjct:  157 LANLARRVLAIPATQAKSERLFSCAGNIVTKNRNNLAPTTVELLVLL 203          
BLAST of mRNA_H-elongata_contig8292.15929.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE)

HSP 1 Score: 63.2 bits (152), Expect = 2.140e-10
Identity = 32/47 (68.09%), Postives = 40/47 (85.11%), Query Frame = 0
Query:    1 LANLARRVLAIPASQAQSERLFSSTGLIVSKRRNRLSPEHVQLLVFV 47
            LA+LARRVL IPA QAQSER+FSS GL+V+K R R+ PE+V L+VF+
Sbjct:  494 LASLARRVLCIPAFQAQSERVFSSAGLVVTKTRARMDPENVGLMVFL 540          
BLAST of mRNA_H-elongata_contig8292.15929.1 vs. uniprot
Match: T1EL11_HELRO (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Helobdella robusta TaxID=6412 RepID=T1EL11_HELRO)

HSP 1 Score: 58.5 bits (140), Expect = 2.160e-10
Identity = 27/47 (57.45%), Postives = 39/47 (82.98%), Query Frame = 0
Query:    1 LANLARRVLAIPASQAQSERLFSSTGLIVSKRRNRLSPEHVQLLVFV 47
            +A +AR+ LAIPA+ A SE++FS +G I+++RRNRL PEHV+ LVF+
Sbjct:    8 IAKVARKYLAIPATSAPSEQIFSMSGQIINERRNRLKPEHVEQLVFL 54          
BLAST of mRNA_H-elongata_contig8292.15929.1 vs. uniprot
Match: A0A6H5JWI1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI1_9PHAE)

HSP 1 Score: 62.8 bits (151), Expect = 2.360e-10
Identity = 33/47 (70.21%), Postives = 39/47 (82.98%), Query Frame = 0
Query:    1 LANLARRVLAIPASQAQSERLFSSTGLIVSKRRNRLSPEHVQLLVFV 47
            LANLARRVLAIPA+QA+SERLFS  G IV+K RN L+P  V+LLV +
Sbjct:  237 LANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVELLVLL 283          
BLAST of mRNA_H-elongata_contig8292.15929.1 vs. uniprot
Match: A0A8C6MBI1_NOTFU (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Nothobranchius furzeri TaxID=105023 RepID=A0A8C6MBI1_NOTFU)

HSP 1 Score: 57.8 bits (138), Expect = 4.970e-9
Identity = 27/47 (57.45%), Postives = 37/47 (78.72%), Query Frame = 0
Query:    1 LANLARRVLAIPASQAQSERLFSSTGLIVSKRRNRLSPEHVQLLVFV 47
            LANLAR+ LAIP +   SER+FS+ GL V++ R RL+P+HV LL+F+
Sbjct:  122 LANLARKYLAIPGTSVPSERVFSAAGLTVNRLRTRLTPDHVDLLIFL 168          
BLAST of mRNA_H-elongata_contig8292.15929.1 vs. uniprot
Match: UPI00148F4C44 (zinc finger BED domain-containing protein 1-like n=1 Tax=Notolabrus celidotus TaxID=1203425 RepID=UPI00148F4C44)

HSP 1 Score: 58.5 bits (140), Expect = 5.470e-9
Identity = 29/47 (61.70%), Postives = 37/47 (78.72%), Query Frame = 0
Query:    1 LANLARRVLAIPASQAQSERLFSSTGLIVSKRRNRLSPEHVQLLVFV 47
            LA LAR+ L IPA+   SER+FSS GLIVS+ R+RL+PEHV  L+F+
Sbjct:  186 LAKLARQYLCIPATSVPSERVFSSAGLIVSRLRSRLTPEHVDKLIFL 232          
BLAST of mRNA_H-elongata_contig8292.15929.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI)

HSP 1 Score: 58.9 bits (141), Expect = 6.660e-9
Identity = 31/47 (65.96%), Postives = 40/47 (85.11%), Query Frame = 0
Query:    1 LANLARRVLAIPASQAQSERLFSSTGLIVSKRRNRLSPEHVQLLVFV 47
            LA LARRVLAIP+SQAQSER+FS+ GL V+  R+RL  E+V+LLV++
Sbjct:  497 LAALARRVLAIPSSQAQSERVFSTAGLTVTPTRSRLLDENVELLVYL 543          
BLAST of mRNA_H-elongata_contig8292.15929.1 vs. uniprot
Match: A0A1A7ZCN3_NOTFU (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Nothobranchius furzeri TaxID=105023 RepID=A0A1A7ZCN3_NOTFU)

HSP 1 Score: 55.8 bits (133), Expect = 6.800e-9
Identity = 27/46 (58.70%), Postives = 34/46 (73.91%), Query Frame = 0
Query:    1 LANLARRVLAIPASQAQSERLFSSTGLIVSKRRNRLSPEHVQLLVF 46
            LA+LA+  L +PA+   SERLFSS G IVSK+R  LSPEH+ +L F
Sbjct:   47 LASLAKSYLCVPATSTPSERLFSSAGNIVSKKRTSLSPEHIDMLTF 92          
BLAST of mRNA_H-elongata_contig8292.15929.1 vs. uniprot
Match: UPI001895D86D (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Rhipicephalus sanguineus TaxID=34632 RepID=UPI001895D86D)

HSP 1 Score: 57.0 bits (136), Expect = 1.280e-8
Identity = 28/47 (59.57%), Postives = 36/47 (76.60%), Query Frame = 0
Query:    1 LANLARRVLAIPASQAQSERLFSSTGLIVSKRRNRLSPEHVQLLVFV 47
            L N+AR  L++PA+Q  SERLFS+TG +V+ RR  L PEHV+ LVFV
Sbjct:  140 LYNIARLYLSVPATQVSSERLFSTTGNVVTARREHLLPEHVEQLVFV 186          
BLAST of mRNA_H-elongata_contig8292.15929.1 vs. uniprot
Match: A0A1A8S4K3_9TELE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Nothobranchius rachovii TaxID=451742 RepID=A0A1A8S4K3_9TELE)

HSP 1 Score: 57.8 bits (138), Expect = 1.680e-8
Identity = 27/47 (57.45%), Postives = 37/47 (78.72%), Query Frame = 0
Query:    1 LANLARRVLAIPASQAQSERLFSSTGLIVSKRRNRLSPEHVQLLVFV 47
            LANLAR+ LAIP +   SER+FS+ GL V++ R RL+P+HV LL+F+
Sbjct:  329 LANLARKYLAIPGTSVPSERVFSAAGLTVNRLRTRLTPDHVDLLIFL 375          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8292.15929.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JPB0_9PHAE1.780e-1070.21Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JHP9_9PHAE2.140e-1068.09Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 13... [more]
T1EL11_HELRO2.160e-1057.45Dimer_Tnp_hAT domain-containing protein n=1 Tax=He... [more]
A0A6H5JWI1_9PHAE2.360e-1070.21Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A8C6MBI1_NOTFU4.970e-957.45Dimer_Tnp_hAT domain-containing protein n=1 Tax=No... [more]
UPI00148F4C445.470e-961.70zinc finger BED domain-containing protein 1-like n... [more]
D8LCS5_ECTSI6.660e-965.96Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ec... [more]
A0A1A7ZCN3_NOTFU6.800e-958.70Dimer_Tnp_hAT domain-containing protein n=1 Tax=No... [more]
UPI001895D86D1.280e-859.57E3 SUMO-protein ligase ZBED1-like n=1 Tax=Rhipicep... [more]
A0A1A8S4K3_9TELE1.680e-857.45Dimer_Tnp_hAT domain-containing protein n=1 Tax=No... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008906HAT, C-terminal dimerisation domainPFAMPF05699Dimer_Tnp_hATcoord: 1..47
e-value: 2.5E-12
score: 46.4
NoneNo IPR availablePANTHERPTHR47611FAMILY NOT NAMEDcoord: 1..46
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 1..47

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig8292contigH-elongata_contig8292:9250..9390 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig8292.15929.1mRNA_H-elongata_contig8292.15929.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig8292 9250..9390 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig8292.15929.1 ID=prot_H-elongata_contig8292.15929.1|Name=mRNA_H-elongata_contig8292.15929.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=47bp
LANLARRVLAIPASQAQSERLFSSTGLIVSKRRNRLSPEHVQLLVFV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008906HATC_C_dom
IPR012337RNaseH-like_sf