prot_H-elongata_contig82484.15902.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig82484.15902.1
Unique Nameprot_H-elongata_contig82484.15902.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length103
Homology
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BLAST of mRNA_H-elongata_contig82484.15902.1 vs. uniprot
Match: D8LIH0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIH0_ECTSI)

HSP 1 Score: 174 bits (440), Expect = 2.240e-53
Identity = 81/104 (77.88%), Postives = 89/104 (85.58%), Query Frame = 0 
Query:    1 MPGKGMTCWDKRELCDLNCVFATTHEGEA-GLTSCSTGCMEEHTVCTDSDDTLEYIECAKECTYTYDASLTKCNQKVSDKTKNTYGANLDACANVSSGIMDDCM 103
            MPGKGMTCWDKRELCDLNCV+ATT E E   LT CSTGC+     CTDS +TL Y+ECAK+CT TYD SLTKCNQKVSD+TKNTYGANLDACAN++SGIMDDCM
Sbjct:   32 MPGKGMTCWDKRELCDLNCVYATTAEDEDFNLTDCSTGCVTSQASCTDSAETLAYVECAKDCTLTYDGSLTKCNQKVSDQTKNTYGANLDACANIASGIMDDCM 135
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BLAST of mRNA_H-elongata_contig82484.15902.1 vs. uniprot
Match: A0A835YM51_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM51_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 1.140e-20
Identity = 48/111 (43.24%), Postives = 63/111 (56.76%), Query Frame = 0 
Query:    1 MPGKGMTCWDKRELCDLNCVFATTHEGEAG--------LTSCSTGCMEEHTVCTDSDDTLEYIECAKECTYTYDASLTKCNQKVSDKTKNTYGANLDACANVSSGIMDDCM 103
            MPGKGM C DK+ELC LNC+  +    +          L SC   C ++ T C D+ D  +YI+CA  C  TYD +L  C Q  S  T  TYG + DACAN+++  MD+CM
Sbjct:   22 MPGKGMGCSDKQELCSLNCLLPSAGTMDLSGVTVTRDDLNSCLDVCDKDLTQCKDTPDNTKYIDCATVCAKTYDVALNACLQAASATTVGTYGTSQDACANLAAAPMDECM 132
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig82484.15902.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LIH0_ECTSI2.240e-5377.88Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YM51_9STRA1.140e-2043.24Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig82484contigH-elongata_contig82484:42..1649 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig82484.15902.1mRNA_H-elongata_contig82484.15902.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig82484 42..1649 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig82484.15902.1 ID=prot_H-elongata_contig82484.15902.1|Name=mRNA_H-elongata_contig82484.15902.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=103bp
MPGKGMTCWDKRELCDLNCVFATTHEGEAGLTSCSTGCMEEHTVCTDSDD
TLEYIECAKECTYTYDASLTKCNQKVSDKTKNTYGANLDACANVSSGIMD
DCM
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