prot_H-elongata_contig82136.15876.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig82136.15876.1
Unique Nameprot_H-elongata_contig82136.15876.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length173
Homology
[Close]
BLAST of mRNA_H-elongata_contig82136.15876.1 vs. uniprot
Match: D7FM70_ECTSI (LisH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM70_ECTSI)

HSP 1 Score: 221 bits (562), Expect = 7.500e-66
Identity = 147/168 (87.50%), Postives = 154/168 (91.67%), Query Frame = 0 
Query:    5 GHLDEVNAIKWDPCGNLLASCSDDYTAKIWRMGQASCVHSLEEHDKEIYTIKWSPRPEKKLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXGEGDYLVSGSFAGHLYIWSVKDGSLIRSYQGEGDIFEVAWNFREDRIAACFSTSLVAVIDFRM 172
            GH DEVNAIKWDP G  LASCSDDYTAKIW+MGQ SCVH+LEEHDKEIYTIKWSPRPEKKLL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS      GDYLVSGSFAGHLYIWSVKDG+L++SYQGEGDIFEVAWNFREDRIAACFSTS V V+D+RM
Sbjct:  453 GHCDEVNAIKWDPSGTFLASCSDDYTAKIWKMGQTSCVHNLEEHDKEIYTIKWSPRPEKKLLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS------GDYLVSGSFAGHLYIWSVKDGTLVKSYQGEGDIFEVAWNFREDRIAACFSTSTVCVMDWRM 614
[Close]
BLAST of mRNA_H-elongata_contig82136.15876.1 vs. uniprot
Match: A0A7S2FEW2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FEW2_9STRA)

HSP 1 Score: 162 bits (410), Expect = 1.070e-46
Identity = 87/177 (49.15%), Postives = 99/177 (55.93%), Query Frame = 0 
Query:    5 GHLDEVNAIKWDPCGNLLASCSDDYTAKIWRMGQASCVHSLEEHDKEIYTIKWSP------RPEKKLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXGEGDYLVSGSFAGHLYIWSVKDGSLIRSYQGEGDIFEVAWNFREDRIAACFSTS---LVAVIDFRM 172
            GH DEVNAIKWDP GN+LASCSDD TAK+W +GQ  C+H L EH KEIYTI+WSP       P KKL+                                      S      GDY+ SGS  G LY+WSVKDGS++RSY+G  DIFEVAWN   +RIAAC   S    V VIDFRM
Sbjct:   96 GHKDEVNAIKWDPSGNILASCSDDTTAKLWALGQPKCLHDLREHGKEIYTIRWSPTGTGSPNPNKKLVLASASFDSMVKLWDVETGACTHSLNRHDKKVYTVAFSPS------GDYIASGSLGGQLYVWSVKDGSIVRSYRGGSDIFEVAWNASGNRIAACGGASEGHAVTVIDFRM 266
[Close]
BLAST of mRNA_H-elongata_contig82136.15876.1 vs. uniprot
Match: A0A7S4D807_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D807_HETAK)

HSP 1 Score: 157 bits (398), Expect = 1.590e-44
Identity = 83/168 (49.40%), Postives = 97/168 (57.74%), Query Frame = 0 
Query:    5 GHLDEVNAIKWDPCGNLLASCSDDYTAKIWRMGQASCVHSLEEHDKEIYTIKWSPRPEKKLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXGEGDYLVSGSFAGHLYIWSVKDGSLIRSYQGEGDIFEVAWNFREDRIAACFSTSLVAVIDFRM 172
            GH DEVNAIKWD  G LLASCSDD TAKIW   + S V +L EH KEIYTI+WSP                                             S      G+YL SGS AGHL IWSVKDG+LI++YQG GDIFEVAWN  E++IAAC+ST++V ++DFRM
Sbjct:  131 GHTDEVNAIKWDAMGTLLASCSDDGTAKIWNPDKDSFVQNLCEHTKEIYTIQWSPTGPGTDNPNKPVHLASASFDATVKLWDVEYGKSIYTLSRNDESVYSVAFSPSGEYLASGSLAGHLCIWSVKDGALIKTYQGSGDIFEVAWNHSENKIAACYSTNVVTILDFRM 298
[Close]
BLAST of mRNA_H-elongata_contig82136.15876.1 vs. uniprot
Match: A0A7S2CU47_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CU47_9STRA)

HSP 1 Score: 154 bits (390), Expect = 3.110e-41
Identity = 81/179 (45.25%), Postives = 101/179 (56.42%), Query Frame = 0 
Query:    5 GHLDEVNAIKWDPCGNLLASCSDDYTAKIWRMGQASCVHSLEEHDKEIYTIKWSP------RPEKKLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXGEGDYLVSGSFAGHLYIWSVKDGSLIRSYQGEGDIFEVAWNFREDRIAACF-----STSLVAVIDFRM 172
            GH DEVNAIKWDP GN+LASCSDD +AK+W +G+ + +H L EH KEIYTI+WSP       P KKL+                                             GDY+ SGS  G LY+WS++DGS++RS++G  DIFEVAWN R DRIAAC      S++ V +IDFRM
Sbjct:  381 GHKDEVNAIKWDPSGNILASCSDDTSAKLWTLGEPNHLHDLREHSKEIYTIRWSPTGLGSQNPNKKLVLASASFDSMVKLWDVERGCCTHSLNRHDKKVYTVAFSPC------GDYIASGSLGGQLYVWSIRDGSIVRSFRGGSDIFEVAWNSRGDRIAACGGYESGSSNAVTIIDFRM 553
[Close]
BLAST of mRNA_H-elongata_contig82136.15876.1 vs. uniprot
Match: A0A445G7Q1_GLYSO (WD40 repeat-containing protein HOS15 n=1 Tax=Glycine soja TaxID=3848 RepID=A0A445G7Q1_GLYSO)

HSP 1 Score: 146 bits (369), Expect = 2.780e-40
Identity = 77/175 (44.00%), Postives = 95/175 (54.29%), Query Frame = 0 
Query:    4 AGHLDEVNAIKWDPCGNLLASCSDDYTAKIWRMGQASCVHSLEEHDKEIYTIKWSP------RPEKKLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXGEGDYLVSGSFAGHLYIWSVKDGSLIRSYQGEGDIFEVAWNFREDRIAACFSTSLVAVIDFRM 172
            AGH  EVN +KWDP G+LLASCSDD TAKIW M Q + +H L EH KEIYTI+WSP       P  KL+                                      S      GDYLVSGS    ++IWS++DG ++++Y G G IFEV WN   D+IAACF+ + V V+DFRM
Sbjct:  121 AGHQGEVNCVKWDPSGSLLASCSDDITAKIWSMKQDTYLHDLREHSKEIYTIRWSPTGPGTNNPNHKLVLASASFDSTVKLWDVELGKLMYSLDGHRHPVY------SVAFSPNGDYLVSGSLDRSMHIWSLRDGKIVKTYTGNGGIFEVCWNKEGDKIAACFANNTVCVLDFRM 289
[Close]
BLAST of mRNA_H-elongata_contig82136.15876.1 vs. uniprot
Match: L8HHW9_ACACA (Transducin (Beta) family 1X-linked, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HHW9_ACACA)

HSP 1 Score: 147 bits (372), Expect = 3.270e-39
Identity = 79/171 (46.20%), Postives = 92/171 (53.80%), Query Frame = 0 
Query:    8 DEVNAIKWDPCGNLLASCSDDYTAKIWRMGQASCVHSLEEHDKEIYTIKWSP------RPEKKLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXGEGDYLVSGSFAGHLYIWSVKDGSLIRSYQGEGDIFEVAWNFREDRIAACFSTSLVAVIDFRM 172
            DEVNAIKWDP G LLASCSDD+TAKIW + Q  CVH  EEH KEIYTIKWSP       P + L+                                             G+YL SG     L+IWSV+DGSL+R+Y+G G IFEV WN   D++AACFS + V VID RM
Sbjct:  311 DEVNAIKWDPSGTLLASCSDDFTAKIWSLKQERCVHDFEEHQKEIYTIKWSPTGVGSPNPNRALVLASASFDAMIKLWDADRGVCFP----------------------SGEYLASGXXXRCLHIWSVRDGSLVRTYRGNGGIFEVCWNKDGDKVAACFSNNTVCVIDVRM 459
[Close]
BLAST of mRNA_H-elongata_contig82136.15876.1 vs. uniprot
Match: A0A7S4K590_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4K590_9EUKA)

HSP 1 Score: 135 bits (340), Expect = 1.920e-37
Identity = 70/161 (43.48%), Postives = 84/161 (52.17%), Query Frame = 0 
Query:   12 AIKWDPCGNLLASCSDDYTAKIWRMGQASCVHSLEEHDKEIYTIKWSPRPEKKLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXGEGDYLVSGSFAGHLYIWSVKDGSLIRSYQGEGDIFEVAWNFREDRIAACFSTSLVAVIDFRM 172
            AIK DP G LLASCSDDYTAK+W M   + +H L +H KEIYTIKWSP  +                                          S      G YL SGSF   L+IWSVKDGSL+++Y+G G IFEV WN    ++AACFS + V V+D RM
Sbjct:    1 AIKRDPSGQLLASCSDDYTAKLWSMSSTNALHDLRQHTKEIYTIKWSPTGQGSANPAANLVLASASFDSTVRIWDPVTGQCRHVLSKHSDPVYSVAFSSNGQYLASGSFDRCLHIWSVKDGSLVKTYRGHGGIFEVCWNAEGTKVAACFSNNTVTVMDVRM 161
[Close]
BLAST of mRNA_H-elongata_contig82136.15876.1 vs. uniprot
Match: I1K293_SOYBN (LisH domain-containing protein n=20 Tax=Phaseoleae TaxID=163735 RepID=I1K293_SOYBN)

HSP 1 Score: 145 bits (365), Expect = 2.230e-37
Identity = 76/174 (43.68%), Postives = 94/174 (54.02%), Query Frame = 0 
Query:    5 GHLDEVNAIKWDPCGNLLASCSDDYTAKIWRMGQASCVHSLEEHDKEIYTIKWSP------RPEKKLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXGEGDYLVSGSFAGHLYIWSVKDGSLIRSYQGEGDIFEVAWNFREDRIAACFSTSLVAVIDFRM 172
            GH  EVN +KWDP G+LLASCSDD TAKIW M Q + +H L EH KEIYTI+WSP       P  KL+                                      S      GDYLVSGS    ++IWS++DG ++++Y G G IFEV WN   D+IAACF+ + V V+DFRM
Sbjct:  457 GHQGEVNCVKWDPTGSLLASCSDDITAKIWSMKQDTYLHDLREHSKEIYTIRWSPTGPGTNNPNHKLVLASASFDSTVKLWDVELGKLIYSLDGHRHPVY------SVAFSPNGDYLVSGSLDRSMHIWSLRDGKIVKTYTGNGGIFEVCWNKEGDKIAACFANNTVCVLDFRM 624
[Close]
BLAST of mRNA_H-elongata_contig82136.15876.1 vs. uniprot
Match: A0A6A5CAK7_NAEFO (Guanine nucleotide-binding protein subunit beta-like protein n=2 Tax=Naegleria TaxID=5761 RepID=A0A6A5CAK7_NAEFO)

HSP 1 Score: 143 bits (361), Expect = 8.570e-37
Identity = 80/179 (44.69%), Postives = 94/179 (52.51%), Query Frame = 0 
Query:    4 AGHLDEVNAIKWDPCGNLLASCSDDYTAKIWRMGQAS-----CVHSLEEHDKEIYTIKWSPRPEKKLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXGEGDYLVSGSFAGHLYIWSVKDGSLIRSYQGEGDIFEVAWNFREDRIAACFSTSL-----VAVIDFRM 172
            AGH DEVNAI+W P G+LLASCSDD+TAKIW  G +S     CV  L+EH KEIYTIKWSP                                             S     +G YL SGSF   L+IWSV DG L+++Y+G G IFEV WN   D++AACFS SL     V V+DF M
Sbjct:  454 AGHEDEVNAIRWSPNGSLLASCSDDFTAKIWSFGSSSSSSQKCVFDLKEHTKEIYTIKWSPTGPGTDYPNRNMVLASASFDATIKLWDPTVGKCLHSLTKHTDPVYSVAFSPDGKYLASGSFDRFLHIWSVHDGKLVKTYRGTGSIFEVCWNSTGDKVAACFSNSLTEEFNVCVLDFHM 632
[Close]
BLAST of mRNA_H-elongata_contig82136.15876.1 vs. uniprot
Match: A0A7J0E419_9ERIC (WD-40 repeat family protein n=1 Tax=Actinidia rufa TaxID=165716 RepID=A0A7J0E419_9ERIC)

HSP 1 Score: 137 bits (346), Expect = 3.110e-36
Identity = 75/175 (42.86%), Postives = 93/175 (53.14%), Query Frame = 0 
Query:    4 AGHLDEVNAIKWDPCGNLLASCSDDYTAKIWRMGQASCVHSLEEHDKEIYTIKWSP------RPEKKLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXGEGDYLVSGSFAGHLYIWSVKDGSLIRSYQGEGDIFEVAWNFREDRIAACFSTSLVAVIDFRM 172
            +GH  EVN +KWDP G+LLASCSDD TAKIW M Q   VH L EH KEIYTI+WSP       P K+LL                                      S      G+YLVSGS    ++IWS+KD  ++++Y G G IFEV WN   ++IAA F+ + V V+DFRM
Sbjct:  185 SGHKGEVNCVKWDPTGSLLASCSDDITAKIWSMKQDKYVHDLREHAKEIYTIRWSPTGPGTNNPNKQLLLVSASFDATVKLWDVEQGRLTCSLNGHRDPVY------SVAFSPNGEYLVSGSLDKSMHIWSLKDRKIVKTYTGSGGIFEVCWNKEGNKIAASFADNTVCVLDFRM 353
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig82136.15876.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FM70_ECTSI7.500e-6687.50LisH domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A7S2FEW2_9STRA1.070e-4649.15Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S4D807_HETAK1.590e-4449.40Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2CU47_9STRA3.110e-4145.25Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A445G7Q1_GLYSO2.780e-4044.00WD40 repeat-containing protein HOS15 n=1 Tax=Glyci... [more]
L8HHW9_ACACA3.270e-3946.20Transducin (Beta) family 1X-linked, putative n=1 T... [more]
A0A7S4K590_9EUKA1.920e-3743.48Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]
I1K293_SOYBN2.230e-3743.68LisH domain-containing protein n=20 Tax=Phaseoleae... [more]
A0A6A5CAK7_NAEFO8.570e-3744.69Guanine nucleotide-binding protein subunit beta-li... [more]
A0A7J0E419_9ERIC3.110e-3642.86WD-40 repeat family protein n=1 Tax=Actinidia rufa... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 67..81
score: 44.84
coord: 22..36
score: 36.24
coord: 115..129
score: 28.83
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 1..35
e-value: 0.025
score: 23.7
coord: 83..128
e-value: 2.6E-6
score: 37.0
coord: 131..169
e-value: 23.0
score: 8.4
coord: 38..80
e-value: 3.5E-7
score: 39.8
IPR001680WD40 repeatPFAMPF00400WD40coord: 85..128
e-value: 0.018
score: 15.9
coord: 40..80
e-value: 6.8E-5
score: 23.6
coord: 5..34
e-value: 3.2E-7
score: 30.9
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 45..89
score: 13.984
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 3..44
score: 13.082
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 90..137
score: 13.249
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 2..172
e-value: 1.3E-60
score: 207.0
NoneNo IPR availablePANTHERPTHR22846WD40 REPEAT PROTEINcoord: 4..172
NoneNo IPR availablePANTHERPTHR22846:SF54WD40 REPEAT-CONTAINING PROTEIN HOS15coord: 4..172
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 67..81
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 3..137
score: 32.008
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 4..171

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig82136contigH-elongata_contig82136:504..2538 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig82136.15876.1mRNA_H-elongata_contig82136.15876.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig82136 504..2538 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig82136.15876.1 ID=prot_H-elongata_contig82136.15876.1|Name=mRNA_H-elongata_contig82136.15876.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=173bp
MIRAGHLDEVNAIKWDPCGNLLASCSDDYTAKIWRMGQASCVHSLEEHDK
EIYTIKWSPRPEKKLLLASASFDATVKLWDVQAGKVVSTLQRHEDPVYSV
AFSPSXXXXGEGDYLVSGSFAGHLYIWSVKDGSLIRSYQGEGDIFEVAWN
FREDRIAACFSTSLVAVIDFRM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf