mRNA_H-elongata_contig81759.15842.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig81759.15842.1 vs. uniprot
Match: D7FX98_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX98_ECTSI) HSP 1 Score: 379 bits (972), Expect = 5.670e-122 Identity = 190/268 (70.90%), Postives = 218/268 (81.34%), Query Frame = 1
Query: 1 QEWTHLETQAIAAMNFRFSSKGNPMGYVSRLAGNMQLFPPELTVAGPSLLYDYDPDLVRELLGHIVPSNMLLVVSGREFKGHTNKVESWYGTEYSCEPLSEELIRSWEACGRRDELRLPEPNPVIATDFELRPPPPN-----------DAPPGPSLIRDDAACRLWYKSDGTFRKPKLNVRVKLVTPVLYESPESLVLATLFVNLLTEDLNEELYMARQAGLGLELTLSKEALYLNLGGYSHKIKVLMERAVKHLASFADTLACERED 771
QEW HLETQAIAAMNFRFSSKG+P Y RLAGNMQ++PP+L VAG SL YDYDPDLVRELLGH+VPSNMLL+V REFKG T+KVE +YG+EYSCE +S++LI SWE CGRR+ELRLPEPNPVIATDF LR P AP GPSLIRDD +CR+W+K+D FRKPKLNVR++LV PVLY+SPESLVLA L V+LL EDLNEELYMA +AGLGL L L+KEAL L+LGGYSHK+KVL+ER V L SF DTLA ++ED
Sbjct: 373 QEWIHLETQAIAAMNFRFSSKGDPSSYACRLAGNMQVYPPDLAVAGQSLRYDYDPDLVRELLGHMVPSNMLLMVVAREFKGETDKVEPYYGSEYSCEAISDDLIESWETCGRREELRLPEPNPVIATDFTLRSPXXXXXXXXXXXXXXSAPVGPSLIRDDDSCRVWHKTDAQFRKPKLNVRIRLVNPVLYDSPESLVLANLLVDLLKEDLNEELYMASEAGLGLNLYLTKEALCLSLGGYSHKMKVLLERVVHRLGSFGDTLAQDKED 640
BLAST of mRNA_H-elongata_contig81759.15842.1 vs. uniprot
Match: A0A6G0XHN0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XHN0_9STRA) HSP 1 Score: 202 bits (513), Expect = 9.220e-56 Identity = 107/245 (43.67%), Postives = 147/245 (60.00%), Query Frame = 1
Query: 7 WTHLETQAIAAMNFRFSSKGNPMGYVSRLAGNMQLFPPELTVAGPSLLYDYDPDLVRELLGHIVPSNMLLVVSGREFKGHTNKVESWYGTEYSCEPLSEELIRSWEACGRRDELRLPEPNPVIATDFELRPPPPNDAPPGPSLIRDDAACRLWYKSDGTFRKPKLNVRVKLVTPVLYESPESLVLATLFVNLLTEDLNEELYMARQAGLGLELTLSKEALYLNLGGYSHKIKVLMERAVKHLASF 741
W ETQ+IA MNFRF SK PM Y + LA MQ++P + VAG SLL++YD D VRE+L + P + L+V +EF+G T VE WY Y+ P++ E+++ W + + L +P PN I DFEL P A P+L+RDDA+CRLW K+D TF KPKLN+ + +P +Y SP ++VL L V + + L E Y A AG+ L + +AL L GGYS K+ VL + VK + F
Sbjct: 363 WVFDETQSIALMNFRFRSKETPMNYATSLASKMQIYPVKHIVAGSSLLFEYDADKVREILALLTPERVRLMVVSKEFQGKTTSVEPWYEAAYNDLPIAPEVLQRWTSTTKESSLAIPHPNAFIPRDFELVKNPTEGA--FPTLLRDDASCRLWCKTDTTFLKPKLNICMAFHSPEIYTSPAAVVLTDLLVRAVKDQLTEYTYDAELAGMRYSLNFTTKALELYGGGYSDKLPVLFQLIVKSMVHF 605
BLAST of mRNA_H-elongata_contig81759.15842.1 vs. uniprot
Match: A0A024U1F2_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U1F2_9STRA) HSP 1 Score: 197 bits (500), Expect = 5.520e-54 Identity = 111/247 (44.94%), Postives = 142/247 (57.49%), Query Frame = 1
Query: 7 WTHLETQAIAAMNFRFSSKGNPMGYVSRLAGNMQLFPPELTVAGPSLLYDYDPDLVRELLGHIVPSNMLLVVSGREFKGHTNKVESWYGTEYSCEPLSEELIRSWEACGRRDELRLPEPNPVIATDFELRPPPPNDAPPG--PSLIRDDAACRLWYKSDGTFRKPKLNVRVKLVTPVLYESPESLVLATLFVNLLTEDLNEELYMARQAGLGLELTLSKEALYLNLGGYSHKIKVLMERAVKHLASF 741
W ETQ+IA MNFRF SK PM Y + LA MQL+P + VAG SLLY+YDP V+ + + P M L+V G+EF+G T VE WY T YS P+ LI W R L P PN I +F+L A PG P L+RDDAA RLW K+D TF KPKLN+ + +PV+Y SP S+VL L V + + L E Y A AG+ L+ + A+ L GGYS K+ VL + +K + F
Sbjct: 363 WVFEETQSIALMNFRFRSKETPMNYATALATRMQLYPVQHIVAGSSLLYEYDPIQVKSIFSLLTPDRMRLLVVGKEFEGTTTDVEPWYETAYSDTPIEPSLIERWSNPARSAALFCPHPNAFIPHNFDLV----ATATPGAVPILLRDDAAARLWVKTDTTFFKPKLNICLAFHSPVIYNSPTSVVLTDLLVRAIKDQLTEFTYDAELAGMRYSLSFTTTAVELYGGGYSDKLPVLFDLILKQIVQF 605
BLAST of mRNA_H-elongata_contig81759.15842.1 vs. uniprot
Match: A0A485LAZ7_9STRA (Aste57867_17268 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LAZ7_9STRA) HSP 1 Score: 196 bits (499), Expect = 7.670e-54 Identity = 109/242 (45.04%), Postives = 140/242 (57.85%), Query Frame = 1
Query: 7 WTHLETQAIAAMNFRFSSKGNPMGYVSRLAGNMQLFPPELTVAGPSLLYDYDPDLVRELLGHIVPSNMLLVVSGREFKGHTNKVESWYGTEYSCEPLSEELIRSWEACGRRDELRLPEPNPVIATDFELRPPPPNDAPPGPSLIRDDAACRLWYKSDGTFRKPKLNVRVKLVTPVLYESPESLVLATLFVNLLTEDLNEELYMARQAGLGLELTLSKEALYLNLGGYSHKIKVLMERAVKHL 732
W ETQ+IA MNFRF SK PM Y + LA MQ++P VAG SLLY +D V +L + P+ M L+V + F+GHT VE WY YS ++ LI+ W R L P PN I DF+L P + P P L+RDD ACRLW K+D TFRKPKLN+ + TPV+Y SP S+VL L V + + L E Y A AG+ L+ + +AL L GGYS K+ VL + V +L
Sbjct: 363 WVFDETQSIALMNFRFRSKETPMNYATSLATKMQIYPVPHIVAGSSLLYAFDAGKVEHVLSLLTPARMRLMVVSKAFEGHTTDVEPWYEAAYSDTAIAPALIQRWSTPTREPSLAFPHPNAFIPHDFDLVTAPTSG--PHPVLLRDDTACRLWCKTDTTFRKPKLNICMTFNTPVIYTSPASVVLTDLMVRAIKDQLTEYTYDAELAGMRYSLSFTTKALELYGGGYSDKLPVLFQLIVTNL 602
BLAST of mRNA_H-elongata_contig81759.15842.1 vs. uniprot
Match: A0A397BRM1_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397BRM1_9STRA) HSP 1 Score: 193 bits (490), Expect = 9.390e-54 Identity = 108/246 (43.90%), Postives = 144/246 (58.54%), Query Frame = 1
Query: 7 WTHLETQAIAAMNFRFSSKGNPMGYVSRLAGNMQLFPPELTVAGPSLLYDYDPDLVRELLGHIVPSNMLLVVSGREFKGHTNKVESWYGTEYSCEPLSEELIRSWEACGRRDELRLPEPNPVIATDFEL-RPPPPNDAPPGPSLIRDDAACRLWYKSDGTFRKPKLNVRVKLVTPVLYESPESLVLATLFVNLLTEDLNEELYMARQAGLGLELTLSKEALYLNLGGYSHKIKVLMERAVKHLASF 741
W ETQ+IA MNFRF SK P+ Y + LA MQL+P + VAG SLLY Y+P V +L + P M L V ++F+G VE WYGT Y+ L LI+ WE+ R + L P PN I +F+L P P P L+RDDAA RLW K+D TF KPKLN+ + L +P++Y+SP S+VL L V + + L E Y A AG+ L+ + AL L GGYS K+ VL++ V ++ F
Sbjct: 65 WVFDETQSIALMNFRFRSKETPINYATSLATRMQLYPVQHIVAGSSLLYTYNPVQVESILSQLTPRRMRLTVVAKDFEGKATDVEPWYGTLYAESALPPSLIQRWESPARTEALFCPHPNAFIPHNFDLVTTPTPGKV---PVLLRDDAAARLWVKTDTTFLKPKLNICLALHSPLIYQSPTSVVLTDLLVRAIKDQLTEYTYDAELAGMRYSLSFTATALELYGGGYSDKLPVLVQLIVANMVHF 307
BLAST of mRNA_H-elongata_contig81759.15842.1 vs. uniprot
Match: W4GHK7_9STRA (Uncharacterized protein n=10 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GHK7_9STRA) HSP 1 Score: 196 bits (497), Expect = 1.420e-53 Identity = 109/246 (44.31%), Postives = 146/246 (59.35%), Query Frame = 1
Query: 7 WTHLETQAIAAMNFRFSSKGNPMGYVSRLAGNMQLFPPELTVAGPSLLYDYDPDLVRELLGHIVPSNMLLVVSGREFKGHTNKVESWYGTEYSCEPLSEELIRSWEACGRRDELRLPEPNPVIATDFEL-RPPPPNDAPPGPSLIRDDAACRLWYKSDGTFRKPKLNVRVKLVTPVLYESPESLVLATLFVNLLTEDLNEELYMARQAGLGLELTLSKEALYLNLGGYSHKIKVLMERAVKHLASF 741
W ETQ+IA MNFRF SK P+ Y + LA MQL+P + VAG SLLY Y+P V +L + P M L V ++F+G T VE WYGT Y+ L LI+ WE+ R + L P PN I +F+L P P + P L+RDDAA RLW K+D TF KPKLN+ + L +P++Y+SP S+VL L V + + L E Y A AG+ L+ + AL L GGYS K+ VL++ V ++ F
Sbjct: 363 WVFDETQSIALMNFRFRSKETPINYATSLATRMQLYPVQHIVAGSSLLYTYNPVQVESILSQLTPRRMRLTVVAKDFEGKTTDVEPWYGTLYTESALPPSLIQRWESPARTEALFCPHPNAFIPHNFDLVTTPTPGNV---PVLLRDDAAARLWVKTDTTFLKPKLNICLALHSPLIYQSPTSVVLTDLLVRAIKDQLTEYTYDAELAGMRYSLSFTATALELYGGGYSDKLPVLVQLIVANMVHF 605
BLAST of mRNA_H-elongata_contig81759.15842.1 vs. uniprot
Match: A0A418FIR8_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418FIR8_9STRA) HSP 1 Score: 193 bits (490), Expect = 5.730e-53 Identity = 108/246 (43.90%), Postives = 144/246 (58.54%), Query Frame = 1
Query: 7 WTHLETQAIAAMNFRFSSKGNPMGYVSRLAGNMQLFPPELTVAGPSLLYDYDPDLVRELLGHIVPSNMLLVVSGREFKGHTNKVESWYGTEYSCEPLSEELIRSWEACGRRDELRLPEPNPVIATDFEL-RPPPPNDAPPGPSLIRDDAACRLWYKSDGTFRKPKLNVRVKLVTPVLYESPESLVLATLFVNLLTEDLNEELYMARQAGLGLELTLSKEALYLNLGGYSHKIKVLMERAVKHLASF 741
W ETQ+IA MNFRF SK P+ Y + LA MQL+P + VAG SLLY Y+P V +L + P M L V ++F+G VE WYGT Y+ L LI+ WE+ R + L P PN I +F+L P P P L+RDDAA RLW K+D TF KPKLN+ + L +P++Y+SP S+VL L V + + L E Y A AG+ L+ + AL L GGYS K+ VL++ V ++ F
Sbjct: 233 WVFDETQSIALMNFRFRSKETPINYATSLATRMQLYPVQHIVAGSSLLYTYNPVQVESILSQLTPRRMRLTVVAKDFEGKATDVEPWYGTLYAESALPPSLIQRWESPARTEALFCPHPNAFIPHNFDLVTTPTPGKV---PVLLRDDAAARLWVKTDTTFLKPKLNICLALHSPLIYQSPTSVVLTDLLVRAIKDQLTEYTYDAELAGMRYSLSFTATALELYGGGYSDKLPVLVQLIVANMVHF 475
BLAST of mRNA_H-elongata_contig81759.15842.1 vs. uniprot
Match: A0A1S4EFX8_DIACI (insulin-degrading enzyme n=1 Tax=Diaphorina citri TaxID=121845 RepID=A0A1S4EFX8_DIACI) HSP 1 Score: 189 bits (479), Expect = 2.340e-51 Identity = 97/255 (38.04%), Postives = 143/255 (56.08%), Query Frame = 1
Query: 1 QEWTHLETQAIAAMNFRFSSKGNPMGYVSRLAGNMQLFPPELTVAGPSLLYDYDPDLVRELLGHIVPSNMLLVVSGREFKGHTNKVESWYGTEYSCEPLSEELIRSWEACGRRDELRLPEPNPVIATDFELRPPPPNDAPPGPSLIRDDAACRLWYKSDGTFRKPKLNVRVKLVTPVLYESPESLVLATLFVNLLTEDLNEELYMARQAGLGLELTLSKEALYLNLGGYSHKIKVLMERAVKHLASFADTLACER 765
QEW E + I + FRF K P YVS L N+ L+P + P +L +Y PDL+ +LL + P NM L + ++F+ +KVE WYGT+Y+ +P+SEE + W D LP PN IATDF L P P D P P+++ + R W+K D +R PKLN + ++P Y PE + LF++L + LNE Y A+ AGL +L+ +K + L + GYSHK VL+ + + LA F++ + +R
Sbjct: 258 QEWIFKEYKEILDIEFRFKEKEKPSSYVSSLCSNLHLYPLNEILVAPYMLTEYKPDLISDLLNRLRPDNMRLALVAKQFEPLCDKVEPWYGTKYTRQPMSEEQLTKWTNVSSNDAFHLPSPNEFIATDFSLLPSDP-DISPHPTILYNSPLIRAWHKQDDEYRVPKLNASFEFISPYAYLDPECTNMTHLFISLFKDALNEYSYDAKLAGLAWDLSNTKYGMMLGISGYSHKQSVLLSKVLDKLADFSNHIDPKR 511
BLAST of mRNA_H-elongata_contig81759.15842.1 vs. uniprot
Match: A0A7S2L3H0_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2L3H0_9STRA) HSP 1 Score: 189 bits (480), Expect = 3.100e-51 Identity = 99/248 (39.92%), Postives = 150/248 (60.48%), Query Frame = 1
Query: 1 QEWTHLETQAIAAMNFRFSSKGNPMGYVSRLAGNMQLFPPELTVAGPSLLYDYDPDLVRELLGHIVPSNMLLVVSGREFKGHTNKVESWYGTEYSCEPLSEELIRSW-EACGRRDE----LRLPEPNPVIATDFELRPPP--PNDAPPGPSLIRDDAACRLWYKSDGTFRKPKLNVRVKLVTPVLYESPESLVLATLFVNLLTEDLNEELYMARQAGLGLELTLSKEALYLNLGGYSHKIKVLMERAV 723
Q+W ET +A +FRF SK P+ Y LAG M L+ P+ ++GP L++YDP + E L PSN+LL+V+ ++F+G T E WYGT++ + + E + W EAC ++ LRLP+ N +I+TDF++R P P D+ P L+ D A CR+WYK D F PKLNV V++ + V+ ESPE+ VLA L++ +L E E YMA A L + + + + L+L GY+HK+ +L+ + +
Sbjct: 386 QKWVFDETSEVANCSFRFLSKRRPISYTCSLAGYMHLYEPQHFLSGPYKLFEYDPASIEECLSCFTPSNLLLIVTQKKFEGETKLSEKWYGTDHDIDIIDENCVSQWLEACSTHEKYNGNLRLPDKNDLISTDFDIREDPDFPLDS---PRLLMDSAKCRVWYKPDNVFSLPKLNVLVRMKSNVVTESPEAAVLALLWIQVLDEHSVEFTYMASMASLHCNFSNATDGIELHLSGYNHKLDILLTKVI 630
BLAST of mRNA_H-elongata_contig81759.15842.1 vs. uniprot
Match: A0A7S1BHP1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BHP1_9STRA) HSP 1 Score: 180 bits (457), Expect = 5.870e-50 Identity = 95/248 (38.31%), Postives = 141/248 (56.85%), Query Frame = 1
Query: 1 QEWTHLETQAIAAMNFRFSSKGNPMGYVSRLAGNMQLFPPELTVAGPSLLYDYDPDLVRELLGHIVPSNMLLVVSGREFKGHTNKVESWYGTEYSCEPLSEELIRSWEACGRRD----ELRLPEPNPVIATDFELRPPPPNDAPPGPSLIRDDAACRLWYKSDGTFRKPKLNVRVKLVTPVLYESPESLVLATLFVNLLTEDLNEELYMARQAGLGLELTLSKEALYLNLGGYSHKIKVLMERAVKHL 732
QEWT ETQ ++ NFRF SK P+ + ++A NM L+P E ++GP +YDYDP+++ + + +V N ++ V + F+G T + E WYGT+YS +S R W A D +L P N +I TDF LR P P PG L+RD CR+++K+D T+R PKLNV + L T Y +P VL ++LTE Y+A A L +K+ + +NL GY+HK+ VL+ + ++ L
Sbjct: 136 QEWTLRETQTVSDNNFRFLSKRRPIDFTQQVAANMHLYPVEHIISGPYKIYDYDPNIITKFVDKMVVENCIVFVVAKAFEGKTTQKEKWYGTDYSLADISPAQARRWTAASVSDPSLSDLGYPARNDLICTDFALRDPAPKREVPG--LLRDTPRCRVFFKTDDTYRMPKLNVLMALNTGAAYATPADAVLTVFLADILTEHCMHFSYLASMADLNSGSYNAKKGIVINLSGYNHKLHVLLSKILEEL 381 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig81759.15842.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig81759.15842.1 >prot_H-elongata_contig81759.15842.1 ID=prot_H-elongata_contig81759.15842.1|Name=mRNA_H-elongata_contig81759.15842.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=257bp QEWTHLETQAIAAMNFRFSSKGNPMGYVSRLAGNMQLFPPELTVAGPSLLback to top mRNA from alignment at H-elongata_contig81759:59..2619+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig81759.15842.1 ID=mRNA_H-elongata_contig81759.15842.1|Name=mRNA_H-elongata_contig81759.15842.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2561bp|location=Sequence derived from alignment at H-elongata_contig81759:59..2619+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig81759:59..2619+ >mRNA_H-elongata_contig81759.15842.1 ID=mRNA_H-elongata_contig81759.15842.1|Name=mRNA_H-elongata_contig81759.15842.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1542bp|location=Sequence derived from alignment at H-elongata_contig81759:59..2619+ (Himanthalia elongata Himel1 dioecious)back to top |