mRNA_H-elongata_contig81525.15820.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig81525.15820.1 vs. uniprot
Match: D8LTU1_ECTSI (DAO domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTU1_ECTSI) HSP 1 Score: 118 bits (295), Expect = 4.890e-30 Identity = 61/74 (82.43%), Postives = 65/74 (87.84%), Query Frame = 1
Query: 1 VGASTAYHLALRGVKPLVIERTGVACAASGKAGGFLAGGWGSGDTVGLHELGFGMHEKLAEVLGVASYRKIRTL 222
VGASTAYHLALRGVKP+VIER+ VA AASGKAGGFLAGGWGSG TV +HE+ F MHEKLAE LGV SYRKI TL
Sbjct: 20 VGASTAYHLALRGVKPIVIERSNVAAAASGKAGGFLAGGWGSGPTVPMHEISFDMHEKLAETLGVTSYRKIPTL 93
BLAST of mRNA_H-elongata_contig81525.15820.1 vs. uniprot
Match: A0A7S0QTC4_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QTC4_9CRYP) HSP 1 Score: 93.2 bits (230), Expect = 4.600e-22 Identity = 49/75 (65.33%), Postives = 59/75 (78.67%), Query Frame = 1
Query: 1 VGASTAYHLALRGVKPLVIERTGVACAASGKAGGFLAGGWGSGD-TVGLHELGFGMHEKLAEVLGVASYRKIRTL 222
+GAS AYHL+ RGV+PLV+ER+ V AASGKAGGFLAGGWG G T LH + F MHE+LA+ LG+ S+RKI TL
Sbjct: 79 IGASIAYHLSKRGVQPLVVERSKVGAAASGKAGGFLAGGWGDGSVTQQLHRVSFRMHEELAKELGIKSFRKIETL 153
BLAST of mRNA_H-elongata_contig81525.15820.1 vs. uniprot
Match: A0A7S0HI94_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HI94_9CRYP) HSP 1 Score: 87.0 bits (214), Expect = 2.660e-20 Identity = 42/72 (58.33%), Postives = 56/72 (77.78%), Query Frame = 1
Query: 7 ASTAYHLALRGVKPLVIERTGVACAASGKAGGFLAGGWGSGDTVGLHELGFGMHEKLAEVLGVASYRKIRTL 222
A+ AY+L+LRGV P +IER+ +ACAASGKAGGF+A GWG+GDT HE+ F +HE+L+ L + YRK+ TL
Sbjct: 56 AAIAYYLSLRGVAPTIIERSEIACAASGKAGGFMARGWGNGDTAEFHEVSFDLHEQLSRDLKLKGYRKLPTL 127
BLAST of mRNA_H-elongata_contig81525.15820.1 vs. uniprot
Match: L1IC24_GUITC (DAO domain-containing protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IC24_GUITC) HSP 1 Score: 90.1 bits (222), Expect = 1.250e-19 Identity = 45/72 (62.50%), Postives = 58/72 (80.56%), Query Frame = 1
Query: 7 ASTAYHLALRGVKPLVIERTGVACAASGKAGGFLAGGWGSGDTVGLHELGFGMHEKLAEVLGVASYRKIRTL 222
A+ AY+L+LRGV P VIER+ +ACAASGKAGGFLA GWG+GDT LHE+ F +HE+L++ L + YRK+ TL
Sbjct: 20 AAIAYYLSLRGVAPTVIERSEIACAASGKAGGFLARGWGNGDTAELHEVSFDLHEQLSKDLKLKGYRKLPTL 91
BLAST of mRNA_H-elongata_contig81525.15820.1 vs. uniprot
Match: A0A7S0LNQ8_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LNQ8_9EUKA) HSP 1 Score: 86.7 bits (213), Expect = 2.470e-18 Identity = 46/73 (63.01%), Postives = 54/73 (73.97%), Query Frame = 1
Query: 4 GASTAYHLALRGVKPLVIERTGVACAASGKAGGFLAGGWGSGDTVGLHELGFGMHEKLAEVLGVASYRKIRTL 222
GAS AY+LA RG +PL++E GVA AASGK GGFLA WGSG T LH F +HE+LA+ LG+ASYRKI L
Sbjct: 29 GASLAYYLAQRGERPLIVEAVGVASAASGKGGGFLARDWGSGPTEQLHIESFKLHEELAQTLGIASYRKIPVL 101
BLAST of mRNA_H-elongata_contig81525.15820.1 vs. uniprot
Match: A0A835ZIK8_9STRA (FAD dependent oxidoreductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIK8_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 3.270e-18 Identity = 45/74 (60.81%), Postives = 55/74 (74.32%), Query Frame = 1
Query: 1 VGASTAYHLALRGVKPLVIERTGVACAASGKAGGFLAGGWGSGDTVGLHELGFGMHEKLAEVLGVASYRKIRTL 222
+ AS AYHL +GVKP+V+ER+ VA AASGK+GGFLA WGSG V LH F +HEKLA+ L V S+RK+ TL
Sbjct: 19 IAASIAYHLTQKGVKPIVLERSEVAAAASGKSGGFLARDWGSGPAVQLHTASFALHEKLAKELTVESFRKLPTL 92
BLAST of mRNA_H-elongata_contig81525.15820.1 vs. uniprot
Match: A0A7S0CUG7_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0CUG7_MICPS) HSP 1 Score: 84.0 bits (206), Expect = 2.640e-17 Identity = 45/74 (60.81%), Postives = 53/74 (71.62%), Query Frame = 1
Query: 4 GASTAYHLALRGVKPLVIERTGVACAASGKAGGFLAGGWGSGD-TVGLHELGFGMHEKLAEVLGVASYRKIRTL 222
G +TAY LA RGV ++ER +A AASGKAGGFLAGGWG G T LH + F +HE LAE LG+ +YRKI TL
Sbjct: 51 GCATAYFLAQRGVPSTIVERVEIAAAASGKAGGFLAGGWGDGGVTQELHRVSFALHETLAETLGLTTYRKIPTL 124
BLAST of mRNA_H-elongata_contig81525.15820.1 vs. uniprot
Match: A0A7S2XXG5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXG5_9STRA) HSP 1 Score: 77.4 bits (189), Expect = 1.530e-16 Identity = 41/64 (64.06%), Postives = 49/64 (76.56%), Query Frame = 1
Query: 1 VGASTAYHLALRGVKPLVIERTGVACAASGKAGGFLAGGWGSGD-TVGLHELGFGMHEKLAEVL 189
+GAS AYHL L+G KP+VIER+ +A AASGKAGGFLAGGWG G T LH + F +H +LAE L
Sbjct: 69 IGASIAYHLTLKGEKPVVIERSKIAAAASGKAGGFLAGGWGDGSVTEALHRVSFKLHAQLAERL 132
BLAST of mRNA_H-elongata_contig81525.15820.1 vs. uniprot
Match: A0A0G4HCU1_9ALVE (DAO domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HCU1_9ALVE) HSP 1 Score: 80.5 bits (197), Expect = 4.750e-16 Identity = 45/76 (59.21%), Postives = 55/76 (72.37%), Query Frame = 1
Query: 4 GASTAYHLALRGVKPL---VIERTGVACAASGKAGGFLAGGWGSGDTVGLHELGFGMHEKLAEVLGVASYRKIRTL 222
G STAYHLA +G L V+ER+GVA AASGKAGGFLA WGSG T LH++ F MH +LA+ L + S+R I+TL
Sbjct: 67 GVSTAYHLAKKGGNSLDITVVERSGVAAAASGKAGGFLARDWGSGPTDALHKISFRMHAELAKELNIESFRPIQTL 142
BLAST of mRNA_H-elongata_contig81525.15820.1 vs. uniprot
Match: A0A061QQ24_9CHLO (DAO domain-containing protein n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061QQ24_9CHLO) HSP 1 Score: 77.4 bits (189), Expect = 1.200e-15 Identity = 41/75 (54.67%), Postives = 56/75 (74.67%), Query Frame = 1
Query: 1 VGASTAYHLALRGVKPLVIERTGVACAASGKAGGFLAGGWGSGD-TVGLHELGFGMHEKLAEVLGVASYRKIRTL 222
+G S AY+L+ RG+ P+VIER+ +A AASGKAGGFLA WG G T LH++ F +HE LA+ LG+ S+R++ TL
Sbjct: 16 IGTSIAYYLSKRGLSPVVIERSDIASAASGKAGGFLARDWGIGTVTQHLHQVSFDLHEDLAKELGIDSFRRLPTL 90 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig81525.15820.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig81525.15820.1 >prot_H-elongata_contig81525.15820.1 ID=prot_H-elongata_contig81525.15820.1|Name=mRNA_H-elongata_contig81525.15820.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=74bp VGASTAYHLALRGVKPLVIERTGVACAASGKAGGFLAGGWGSGDTVGLHEback to top mRNA from alignment at H-elongata_contig81525:382..603- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig81525.15820.1 ID=mRNA_H-elongata_contig81525.15820.1|Name=mRNA_H-elongata_contig81525.15820.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=222bp|location=Sequence derived from alignment at H-elongata_contig81525:382..603- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig81525:382..603- >mRNA_H-elongata_contig81525.15820.1 ID=mRNA_H-elongata_contig81525.15820.1|Name=mRNA_H-elongata_contig81525.15820.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=444bp|location=Sequence derived from alignment at H-elongata_contig81525:382..603- (Himanthalia elongata Himel1 dioecious)back to top |