mRNA_H-elongata_contig81475.15816.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig81475.15816.1 vs. uniprot
Match: A0A6H5KIH9_9PHAE (Amino_oxidase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIH9_9PHAE) HSP 1 Score: 300 bits (769), Expect = 3.210e-98 Identity = 152/261 (58.24%), Postives = 188/261 (72.03%), Query Frame = 1
Query: 184 VPALAERFEVPNFPQYDTGLYALDDGES--VRKTRQPLHSARVRFQGGAAAITDAMAIYLHEKGANVQLDCTITRITTSDDEVVMVEGNQGGEFKSWSAKVVFVAIPPRLALPPLMTWEPSLPVEVSTAATRTPTWMAYTTKVLVTYQSPFWREMGLSGNAASYGGEPIQELYDSCGPPWSDGPYALCGFVFADDARGPPTDDVLRPQVLRQLERIFGSEARSPLSFYSHRWGEDTMTSGNGGAAGGGHNSMGYVALRRPF 960
+PALA+RF V +FPQYD G++ +D G V +TRQPL S +VRFQGGAAA+ DA+A ++ KG + L C + +I+T+D + V+VEG + GE +SW A V +AIPPRL LPPL++WEP LP E++ AA TPTWMA TTKVLVTY PFWRE GLSG Y PI +LYDSCGP S+ P+ALCGF+F A P DD LR +V+ QLER+FG+EARS LSF SHRWGE +TSGNGG GGGH+ MG LR PF
Sbjct: 1 MPALAQRFGVAHFPQYDEGVHVIDYGSQKLVARTRQPLDSPKVRFQGGAAAVADALASHVCAKGVKIVLGCVVNKISTTDADAVLVEGVELGEPRSWRAGAVLLAIPPRLILPPLISWEPRLPAELAEAAGATPTWMADTTKVLVTYPRPFWREQGLSGTGMGYAEGPINQLYDSCGPDGSE-PHALCGFIFGAGA-DLPGDDTLRLRVIEQLERMFGAEARSTLSFSSHRWGEQPLTSGNGGGTGGGHDDMGKSELRIPF 259
BLAST of mRNA_H-elongata_contig81475.15816.1 vs. uniprot
Match: D7G925_ECTSI (Amino_oxidase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G925_ECTSI) HSP 1 Score: 261 bits (667), Expect = 9.150e-83 Identity = 132/226 (58.41%), Postives = 163/226 (72.12%), Query Frame = 1
Query: 289 LHSARVRFQGGAAAITDAMAIYLHEKGANVQLDCTITRITTSDDEVVMVEGNQGGEFKSWSAKVVFVAIPPRLALPPLMTWEPSLPVEVSTAATRTPTWMAYTTKVLVTYQSPFWREMGLSGNAASYGGEPIQELYDSCGPPWSDGPYALCGFVFADDARGPPTDDVLRPQVLRQLERIFGSEARSPLSFYSHRWGEDTMTSGNGGAAGGGHNSMGYVALRRPFVS 966
+ S +VRFQGGAAA+TDA+A ++ KG + L C + +I+T+D + V+VEG + E +SW A +AIPPRL LPPL++WEPSLP E++ AA TPTWMA TTKVLVTY PFWRE GLSG A YG PI +LYDSCG S+ P+ALCGF+F A P DD LR +V+ QLER+FG+EARS LSF SHRWGE +TSGNGG GGGH+ MG L+ PF S
Sbjct: 1 MDSPKVRFQGGAAAVTDALASHVRAKGVKIVLGCVVNKISTTDADAVLVEGVELAEPRSWRAGAALLAIPPRLILPPLISWEPSLPAELAEAAGATPTWMADTTKVLVTYPRPFWREQGLSGTAMGYGEGPINQLYDSCGSDGSE-PHALCGFIFGAGA-DLPGDDTLRLRVIEQLERMFGAEARSALSFSSHRWGEQPLTSGNGGGTGGGHDDMGKSELKIPFGS 224
BLAST of mRNA_H-elongata_contig81475.15816.1 vs. uniprot
Match: A0A7K0TN60_9ACTN (NAD(P)-binding protein n=2 Tax=root TaxID=1 RepID=A0A7K0TN60_9ACTN) HSP 1 Score: 172 bits (436), Expect = 1.700e-47 Identity = 119/315 (37.78%), Postives = 169/315 (53.65%), Query Frame = 1
Query: 7 DVVIVGAGLSGLTSAVHLLDLGVKSITVLEGRTRVGGRLRAHKAVDVGGAWCWTGSHHRVPALAERFEVPNFPQYDTGLYALDDGESV-RKTRQPLHSARVRFQGGAAAITDAMAIYLHEKGANVQLDCTITRITTSDDEVVMVEGNQGGEFKSWSAKVVFVAIPPRLALPPLMTWEPSLPVEVSTAATRTPTWMAYTTKVLVTYQSPFWREMGLSGNAASYGGEPIQELYDSCGPPWSDGPYALCGFVFADDARGPPTDDVLRPQVLRQLERIFGSEARSPLSFYSHRWGEDTMTSGNGGAAGGGHNSMGYVAL 948
DVV++GAG+SGL + +L G ++TVLE RTRVGGRL + +D+G +W W G RV A+ +RFE+ FPQY G +D+ + V R P+ RF GAAA+T+A+A L + V LD + +T DE+V++ W + V +A+PP +A+ + E +LP + A RTP WM+ T KV+VTY PFWR GL+G+A S G P+ E++D CGP S P AL GF A G + ++ QL RIFG A +P W + T+ A +S G+ L
Sbjct: 5 DVVVIGAGISGL-AVCEVLHRGGLAVTVLEARTRVGGRLLS-SPLDLGASWFWDGER-RVRAMTDRFEIATFPQYRAGDAMIDERDGVHRYPGNPIDGQAHRFVNGAAALTNALAGELPQ--GVVLLDQPVIEVT---DELVVLTATS-----RWQPQHVVIAVPPAVAVAAIRLPE-ALPGNLVDIAQRTPVWMSDTVKVVVTYDEPFWRSDGLAGSAISRAG-PLHEIHDLCGPDGS--PSALFGFARAGQPSG-----LTESEICAQLGRIFGPRAHAPRELQIQDWSSEQWTNPAMAAPESAQSSPGFALL 297
BLAST of mRNA_H-elongata_contig81475.15816.1 vs. uniprot
Match: A0A3C1P350_9ACTN (FAD-dependent oxidoreductase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A3C1P350_9ACTN) HSP 1 Score: 161 bits (407), Expect = 3.300e-43 Identity = 130/334 (38.92%), Postives = 167/334 (50.00%), Query Frame = 1
Query: 7 DVVIVGAGLSGLTSAVHLLDLGVKSITVLEGRTRVGGRLRAHKAVDVGGAWCWTGSHHRVPALAERFEVPNFPQYDTGLYALDDGESV-RKTRQPLHSARVRFQGG----AAAITDAM-AIYLHEKGANVQLDCTITRITTSDDEVVMVEGNQGGEFKSWSAKVVFVAIPPRLALPPLMTWEPSLPVEVSTA----ATRTPTWMAYTTKVLVTYQSPFWREMGLSGNAASYGGEPIQELYDSCGPPWSDG-PYALCGFVFADDARGPPTDDVLRPQVLRQLERIFGSEARSPLSFYSHRWGEDTMTSGNGGAAGGGHNSMGYVALRRPFVSRTL 975
DVVIVGAG+SGL +A LLD G+ S+ VLE R R GGRL +D+G +W W G RV L ER+ + F QY G +DD + V R P+ R GG AAA+TDA+ + LH++ T R T D V+ E W + V +A+PP LA + SLP ++S A A RTP WM KV+ Y+ PFWR GL+G S G P+QE++D G DG P AL GF D R + V QLER+FG+EA SPL W E+ T G A ++ G+ ALR P V L
Sbjct: 8 DVVIVGAGISGLATAHGLLDAGL-SVVVLEARGRTGGRLLG-SPLDLGASWFWPGEE-RVRRLTERWAISTFDQYRAGDAIIDDVDGVHRYPGNPIDVLAHRIAGGTATLAAALTDALPSDVLHQE--------TPVRSITDDLTVLTSE-------HEWHPRHVVLALPPALAAETI-----SLPTQLSQATVEVALRTPVWMGNAVKVVAHYREPFWRGAGLAGAGMSRRG-PLQEIHDMSG---LDGEPAALFGFARPDAIRAG-----IEADVRAQLERMFGAEAGSPLELLIRNWSEERWTMPRGIPASTDYSMFGHRALREPAVGGRL 309
BLAST of mRNA_H-elongata_contig81475.15816.1 vs. uniprot
Match: A0A346SDY7_9RHOB (FAD-dependent oxidoreductase n=2 Tax=Ruegeria TaxID=97050 RepID=A0A346SDY7_9RHOB) HSP 1 Score: 160 bits (406), Expect = 6.130e-43 Identity = 116/306 (37.91%), Postives = 165/306 (53.92%), Query Frame = 1
Query: 4 SDVVIVGAGLSGLTSAVHLLDLGVKSITVLEGRTRVGGRL----RAHKAVDVGGAWCWTGSHHRVPALAERFEVPNFPQYDTGLYALDDGESVRKTRQPLHSAR--VRFQGGAAAITDAMAIYLHEKGANVQLDCTITRITTSDDEVVMVEGNQGGEFKSWSAKVVFVAIPPRLALPPLMTWEPSLPVEVSTAATRTPTWMAYTTKVLVTYQSPFWREMGLSGNAASYGGEPIQELYDSCGPPWSDGPYALCGFVFADDARGPPT----DDVLRPQVLRQLERIFGSEARSPLSFYSHRWGEDTMT 891
+D +I+G GLSGL+ A L+D G + + V+E R R+GGR+ R D+G AW W G R+ AL ER + F Q+ +G + +D + K + S R GG AA+TDA++ L + +QL IT + S+ EV + Q G + SA+ V +AIPPR+A + +EP+LP +A TWMA K L Y +PFWR+ GLSG+A S G P+ E++D+ P S GP+AL GF+ PP + VLR QVL QL R+FG +A P + + W D T
Sbjct: 3 TDTLIIGGGLSGLSLATQLVDQG-QEVLVVEARNRLGGRILTEVRGDGRFDMGPAWFWPGQP-RIAALIERLGLHRFDQFSSGALSFEDEQGRVKRGRGFSSMEGSYRLMGGLAALTDALSARLPD--GVIQLSTQITALVQSEGEVRVT--TQSG--RHISARHVVLAIPPRIAAE--LIFEPALPDGTLSAMREIATWMAGQAKALAVYDTPFWRDHGLSGDAMSRRG-PMVEIHDAS--PASGGPFALFGFIGI-----PPQTRRDEGVLRQQVLAQLGRLFGHKATGPSTLFLKDWAFDRFT 290
BLAST of mRNA_H-elongata_contig81475.15816.1 vs. uniprot
Match: A0A1H3AY25_9BACT (Monoamine oxidase n=1 Tax=Hymenobacter psychrophilus TaxID=651662 RepID=A0A1H3AY25_9BACT) HSP 1 Score: 155 bits (392), Expect = 9.250e-41 Identity = 118/310 (38.06%), Postives = 161/310 (51.94%), Query Frame = 1
Query: 4 SDVVIVGAGLSGLTSAVHLLDLGVKSITVLEGRTRVGGRLRAHKA-----------VDVGGAWCWTGSHH-RVPALAERFEVPNFPQYDTGLYALDDGESVRKTRQPLHSAR-VRFQGGAAAITDAMAIYLHEKGANVQLDCTITRITTSDDEVVMVEGNQGGEFKSWSAKVVFVAIPPRLALPPLMTWEPSLPVEVSTAATRTPTWMAYTTKVLVTYQSPFWREMGLSGNAASYGGEPIQELYDSCGPPWSDGPYALCGFVFADDARGPPTDDVLRPQVLRQLERIFGSEARSPLSFYSHRWGEDTMTS 894
S ++I+GAGLSGL +A L+ G +++ VLE R RVGGR A A D+G W W SH ++ ALA + F QY TG A + G +V + P SA +RF GGAAA+ A+A L VQL T + D V V + G+ +++ A V VA+PPRLA L +EP+L V A +TPTWM+++ K LVTY++PFWRE+G SG S G P+ E++D+ P G L GF A A V+ QL R+FG A PL++ W + TS
Sbjct: 5 SLILILGAGLSGLVAARRLVAAG-RTVRVLEARDRVGGRTHAVPAHPGGGHSSGALADLGATWGW--SHQPQLLALARELHLAPFEQYSTGATAYETGGTVHRLPHPSGSAGYLRFAGGAAALAQAVAAAL--PAGTVQLGARATGLRQLADGVE-VTTKENGQPRTYRAAAVVVALPPRLAGYSLQ-FEPALSAAVQAAQQQTPTWMSHSMKSLVTYETPFWRELGWSGFGVSQQG-PLTEIHDATPPEGQPG--VLFGFFAAPHALRNAPVAAREAAVVAQLVRLFGPAAARPLAYQELDWTREPFTS 304
BLAST of mRNA_H-elongata_contig81475.15816.1 vs. uniprot
Match: UPI001A8EB26E (FAD-dependent oxidoreductase n=1 Tax=Bacillus sp. NTK074B TaxID=2802174 RepID=UPI001A8EB26E) HSP 1 Score: 152 bits (385), Expect = 8.560e-40 Identity = 109/306 (35.62%), Postives = 153/306 (50.00%), Query Frame = 1
Query: 10 VVIVGAGLSGLTSAVHLLDLGVKSITVLEGRTRVGGRLRAHKA-------VDVGGAWCWTGSHHRVPALAERFEVPNFPQYDTGLYALDDGESVRKTRQPLHSARV----RFQGGAAAITDAMAIYLHEKGANVQLDCTITRITTSDDEVVMVEGNQGGEFKSWSAKVVFVAIPPRLALPPLMTWEPSLPVEVSTAATRTPTWMAYTTKVLVTYQSPFWREMGLSGNAASYGGEPIQELYDSCGPPWSDGPYALCGFV-FADDARGPPTDDVLRPQVLRQLERIFGSEARSPLSFYSHRWGEDTMT 891
V+IVGAGLSGL +A L GV+ + VLE R R+GGR+ + VD+G W W + L + + F Q+ G + E+ R L V R GG ++ DA+ L VQL+ T+ I D+ V VE + G K W+A+ V +A+PPRL L + PSLP E+ + TPTWMA K + Y++PFWR+ GLSG S+ G P+QE++D+ +G AL GF + R D + VL QL R+FG +A SP+S W +D T
Sbjct: 5 VIIVGAGLSGLRAASLLHSKGVQCV-VLEARGRIGGRVISETIGGTDLGKVDLGPTWFWPDYEPLITRLVKELGLQTFLQHTEGALLYEQSENAVPQRHVLPEGAVQRSFRLHGGVKSLIDAVHDTL--PSGIVQLNTTVKAIRMDDEGEVTVEAGEQGLKKEWNAEAVILAMPPRLVARRL-AFSPSLPEELMQSLIETPTWMAGQAKAVAVYETPFWRDEGLSGQVTSWAG-PLQEIHDASP---DEGVGALFGFSGMPAETRRELGQDKIVDLVLEQLIRLFGEQAGSPISLLYKDWSDDPHT 302
BLAST of mRNA_H-elongata_contig81475.15816.1 vs. uniprot
Match: UPI0004789D5F (FAD-dependent oxidoreductase n=1 Tax=Alkalicoccus chagannorensis TaxID=427072 RepID=UPI0004789D5F) HSP 1 Score: 152 bits (383), Expect = 1.230e-39 Identity = 105/297 (35.35%), Postives = 162/297 (54.55%), Query Frame = 1
Query: 13 VIVGAGLSGLTSAVHLLDLGVKSITVLEGRTRVGGRLRAHKAVDVGGAWCWTGSHHRVPALAERFEVPNFPQYDTGLYALDD-GESVRKTRQPLHSARV--RFQGGAAAITDAMAIYLHEKGANVQLDCTITRITTSDDEVVMVEGNQGGEFKSWSAKVVFVAIPPRLALPPLMTWEPSLPVEVSTAATRTPTWMAYTTKVLVTYQSPFWREMGLSGNAASYGGEPIQELYDSCGPPWSDGPYALCGFVFADDA-RGPPTDDVLRPQVLRQLERIFGSEARSPLSFYSHRWGEDTMT 891
+I+GAG +GL +A L++ G K + +LE R R GGR+ + D+G W W + L + +P Q+ G ++ G V++ + P +A V R QGG +TDA+A L E ++ L T+T +T D V +VE G S+ + V +A+PPRLA + + P+LP + + A PTWMA K L Y++PFW+E GLSG A S+ G P+QE++D+ +G A+ GFV A R ++ ++ VL QLE +FG A +P +FY + W +D +T
Sbjct: 6 IIIGAGAAGLYAANQLVEAG-KEVHILEARGRTGGRVHSVDGWDLGPTWYWPEQEPLMTDLVQSLGLPVSTQHTHGHILVEQAGGRVQRHQLPAGAASVSHRLQGGMQQLTDALAAPLPEN--HLHLHTTVTAVTLQVDGV-LVETTNG----SFEGETVLLALPPRLAAEHIR-FHPALPADTAGAMHNRPTWMAGHAKALAVYETPFWQEEGLSGQAMSWRG-PLQEIHDASP---ENGTGAIFGFVGLPQAERQRLSESDIQKLVLEQLENLFGPPAAAPTAFYYYNWTDDPLT 289
BLAST of mRNA_H-elongata_contig81475.15816.1 vs. uniprot
Match: A0A6I2XYJ7_9ACTN (FAD-dependent oxidoreductase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A6I2XYJ7_9ACTN) HSP 1 Score: 150 bits (380), Expect = 2.960e-39 Identity = 116/331 (35.05%), Postives = 166/331 (50.15%), Query Frame = 1
Query: 4 SDVVIVGAGLSGLTSAVHLLDLGVKSITVLEGRTRVGGRLRAHKAVDVGGAWCWTGSHHRVPALAERFEVPNFPQYDTGLYALDDGESV-RKTRQPLHSARVRFQGGAAAITDAMAIYLHEKGANVQLDCTITRITTSDDEVVMVEGNQGGEFKSWSAKVVFVAIPPRLALPPLMTWEPSLPVEVSTAATRTPTWMAYTTKVLVTYQSPFWREMGLSGNAASYGGEPIQELYDSCGPPWSDG-PYALCGFVFADDARGPPTDDVLRPQVLRQLERIFGSEARSPLSFYSHRWGEDTMTSGNGGA-----AGGGHNSMGYVALRRPFVSRTL 975
+DVV++GAG+SGL A + G +++TVLE R R+GGRL + +D+G +W W G RV A+ +RF + FPQ+ G +D+ + V R P+ RF GAA++TDA+A L E+ V + + I SDD V SW + V +A+PP +A+ + SLP + A RTP WM T KV+ Y PFWR GL+G A S G P+ E++D GP DG P A+ GF ARG + + V Q+ RIFG A P W D T+ A ++ G+ ++P +S L
Sbjct: 4 ADVVVIGAGISGLAVAEAVHRSG-RTVTVLEARPRIGGRLLSDP-LDLGASWFWDGEQ-RVRAMTDRFGIATFPQHTAGDAMIDERDGVHRYPGNPIDGPAHRFAHGAASLTDALASQLPER--TVLVGQPVVEI--SDDLGVKTADG------SWQPRHVVIAVPPAVAVTTIRLPH-SLPTNLMAVALRTPVWMGDTIKVVAMYDEPFWRTDGLAGAAISRVG-PLHEMHDLSGP---DGLPAAIFGF-----ARGGQPNGLDETDVRAQMARIFGPHAGVPQELQIQDWSRDQWTNPAASAEEYVPTAPDYSMFGHAMYQQPHLSGRL 311
BLAST of mRNA_H-elongata_contig81475.15816.1 vs. uniprot
Match: A0A090K9V7_9GAMM (Putative monoamine oxidase n=5 Tax=Moritella TaxID=58050 RepID=A0A090K9V7_9GAMM) HSP 1 Score: 151 bits (382), Expect = 2.970e-39 Identity = 106/315 (33.65%), Postives = 158/315 (50.16%), Query Frame = 1
Query: 4 SDVVIVGAGLSGLTSAVHLLDLGVKSITVLEGRTRVGGRLRAHKAVDVGGAWCWTGSHHRVPALAERFEVPNFPQYDTGLYALDDGESVRKTRQPLHSA----RVRFQGGAAAITDAMAIYLHEKGANVQLDCTITRIT---TSDDEVVMVEGNQGGEFKSWSAKVVFVAIPPRLALPPLMTWEPSLPVEVSTAATRTPTWMAYTTKVLVTYQSPFWREMGLSGNAASYGGEPIQELYDSCGPPWSD-----------GPYALCGFVFAD-DARGPPTDDVLRPQVLRQLERIFGSEARSPLSFYSHRWGEDTMT 891
++ VI+G GLSGL +A L LG K +LEGR+R+GGR+ D+G +W W G H R+ L +P FPQ+D G + D E+ R A +R GG + D++ L K + L+ ++ +T T D +V+ GE ++ A+ V A+P RL L +T P+LP +V T TWMA K Y++PFWRE GLSG+A+S G P+ E++D+ W+ G AL GFV D R D+++ ++QL RI+G +A P+ W ++ MT
Sbjct: 3 TEFVIIGGGLSGLYTAYLLEQLG-KDYILLEGRSRLGGRIYTEDQFDMGPSWFWPGMHPRITTLINALHLPVFPQHDKGAFLFDKHENKPPQRYEAGYAGSPQSMRVAGGMQTVVDSIKAKLTNKC--IILNARVSNVTHTATDQDSYSIVKTEIDGEQQTIQARQVIFAMPLRL-LANSITLSPALPTKVQNKFASTATWMAAHAKFFAIYKTPFWRETGLSGSASSQVG-PLAEIHDASTMDWAIDDSSTANSSNVGAGALFGFVGVDAHTRQSAGRDLIKSLAVKQLVRIYGKQAAQPMDVKLVDWSQEHMT 312 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig81475.15816.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig81475.15816.1 >prot_H-elongata_contig81475.15816.1 ID=prot_H-elongata_contig81475.15816.1|Name=mRNA_H-elongata_contig81475.15816.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=327bp MSDVVIVGAGLSGLTSAVHLLDLGVKSITVLEGRTRVGGRLRAHKAVDVGback to top mRNA from alignment at H-elongata_contig81475:119..2533- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig81475.15816.1 ID=mRNA_H-elongata_contig81475.15816.1|Name=mRNA_H-elongata_contig81475.15816.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2415bp|location=Sequence derived from alignment at H-elongata_contig81475:119..2533- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig81475:119..2533- >mRNA_H-elongata_contig81475.15816.1 ID=mRNA_H-elongata_contig81475.15816.1|Name=mRNA_H-elongata_contig81475.15816.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1962bp|location=Sequence derived from alignment at H-elongata_contig81475:119..2533- (Himanthalia elongata Himel1 dioecious)back to top |