mRNA_H-elongata_contig12058.1580.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig12058.1580.1 vs. uniprot
Match: D7FQ08_ECTSI (Metallophos domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ08_ECTSI) HSP 1 Score: 142 bits (358), Expect = 3.160e-38 Identity = 60/98 (61.22%), Postives = 78/98 (79.59%), Query Frame = 1
Query: 19 QTIGSAPLERQIRELGSTLHVFGHTHIPIDIGCDGVRYLQWPLGSVAEHSRQCKKMREEGPLVVYSHDGREGGLSPQVPTFWGDYYREHARDVREVSV 312
+ IGSAPLERQIRELGS +H+FGHTHIPID+ +GVRY+QWPLG++ E S + MRE+GPL+VYSHDG EGGL P V T+WG++Y+ + RD + +
Sbjct: 351 KVIGSAPLERQIRELGSDVHIFGHTHIPIDMTSEGVRYVQWPLGTLREQSYRTNDMREKGPLLVYSHDGSEGGLRPPVHTWWGEFYKAYPRDPHDTEI 448
BLAST of mRNA_H-elongata_contig12058.1580.1 vs. uniprot
Match: A0A835Z6X9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6X9_9STRA) HSP 1 Score: 119 bits (297), Expect = 1.620e-32 Identity = 56/104 (53.85%), Postives = 70/104 (67.31%), Query Frame = 1
Query: 31 SAPLERQIRELGSTLHVFGHTHIPIDIGCDGVRYLQWPLGSVAEHSRQCKKMREEGPLVVYSHDG---------REGGL--SPQVPTFWGDYYREHARDVREVS 309
+ PL Q+R+L S +HVFGHTHIPID+ DGVRYLQWPLGS E +RQC++MRE GPL++Y+ R GG + + PT WG YY EHARD +VS
Sbjct: 1 AVPLRAQVRQLRSDMHVFGHTHIPIDMEVDGVRYLQWPLGSPREQARQCRRMREAGPLLLYNXXXXXXXXXXXQRPGGALATGRHPTLWGSYYSEHARDTSQVS 104
BLAST of mRNA_H-elongata_contig12058.1580.1 vs. uniprot
Match: A0A7S4D9V0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D9V0_HETAK) HSP 1 Score: 114 bits (285), Expect = 2.560e-29 Identity = 51/98 (52.04%), Postives = 59/98 (60.20%), Query Frame = 1
Query: 19 QTIGSAPLERQIRELGSTLHVFGHTHIPIDIGCDGVRYLQWPLGSVAEHSRQCKKMREEGPLVVYSHDGREGGLSPQVPTFWGDYYREHARDVREVSV 312
+ IGS PLERQ+R LGS LH++GH HIP+DI GVRY WPLGS E RQC + GPL VY G T WGD+YREHARD +
Sbjct: 128 KVIGSDPLERQVRRLGSDLHIYGHLHIPMDIELGGVRYCHWPLGSAREQGRQCAPVLAAGPLAVYDTAAAAAGPLEVQATMWGDHYREHARDPSNAEI 225
BLAST of mRNA_H-elongata_contig12058.1580.1 vs. uniprot
Match: W7T6H8_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T6H8_9STRA) HSP 1 Score: 114 bits (286), Expect = 1.130e-27 Identity = 53/98 (54.08%), Postives = 66/98 (67.35%), Query Frame = 1
Query: 19 QTIGSAPLERQIRELGSTLHVFGHTHIPIDIGCDGVRYLQWPLGSVAEHSRQCKKMREEGPLVVYSHDGREGGLSPQVPTFWGDYYREHARDVREVSV 312
+ IGS PL +Q+ L LHVFGHTHIPID+ G+RYLQWPLGSV E SRQ +M GP++V+ D GGL +PT WG +YRE AR+V E +
Sbjct: 439 KVIGSTPLRKQVEALRPDLHVFGHTHIPIDLTVQGIRYLQWPLGSVGEQSRQTYEMGRRGPVLVF--DEERGGLVGTIPTRWGAHYREAARNVLETEL 534
BLAST of mRNA_H-elongata_contig12058.1580.1 vs. uniprot
Match: F0Y4R2_AURAN (Metallophos domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4R2_AURAN) HSP 1 Score: 95.1 bits (235), Expect = 1.170e-20 Identity = 43/89 (48.31%), Postives = 58/89 (65.17%), Query Frame = 1
Query: 28 GSAPLERQIRELGSTLHVFGHTHIPIDIGCDGVRYLQWPLGSVAEHSRQCKKMREEGPLVVYSHDGREGGLSPQVPTFWGDYYREHARD 294
GS +E Q+R LG HVFGHTH+ D+ DGVRY+ WPLGS E + Q + + G LV++ DG + G +P+ TFWGD+YR+ RD
Sbjct: 384 GSELIEAQLRVLGPDAHVFGHTHLCYDLELDGVRYVNWPLGSAREMANQTRVVAGSGALVLF--DGAKDGFAPRQWTFWGDWYRDRRRD 470
BLAST of mRNA_H-elongata_contig12058.1580.1 vs. uniprot
Match: A0A7S2CUQ4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CUQ4_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 1.430e-16 Identity = 36/92 (39.13%), Postives = 56/92 (60.87%), Query Frame = 1
Query: 19 QTIGSAPLERQIRELGSTLHVFGHTHIPIDIGCDGVRYLQWPLGSVAEHSRQCKKMREEGPLVVYSHDGREGGLSPQVPTFWGDYYREHARD 294
+ GS +ERQ+RE S++H+FGH+HIP+D+ +GVRY+ W LGS E Q + + G L++ + +P T+W +YY +H RD
Sbjct: 7 KVCGSNEIERQLREAKSSVHIFGHSHIPMDMTLEGVRYVNWCLGSPREMKNQTRLVAGTGILLLLD----DVAWAPPQWTYWSEYYDQHPRD 94
BLAST of mRNA_H-elongata_contig12058.1580.1 vs. uniprot
Match: A0A7S0JDJ9_9EUKA (Hypothetical protein n=2 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JDJ9_9EUKA) HSP 1 Score: 83.2 bits (204), Expect = 1.830e-16 Identity = 43/90 (47.78%), Postives = 55/90 (61.11%), Query Frame = 1
Query: 28 GSAPLERQIRELGSTLHVFGHTHIPIDIGCDGVRYLQWPLGSVAEHSRQCKKMREEGPLVVYSHDGREGGLSPQVPTFWGDYYREHARDV 297
GS LE QIR+L +H+FGHTHIP D +GVRY+QW LG+ E Q + + PL VY D GG +PQ T WG +Y +ARD+
Sbjct: 373 GSRKLEEQIRQLMPDMHLFGHTHIPFDTTIEGVRYVQWALGTPREQRGQTRVVF--APLCVY--DTHCGGEAPQHWTHWGHHYEVYARDL 458
BLAST of mRNA_H-elongata_contig12058.1580.1 vs. uniprot
Match: R1CX54_EMIHU (Metallophos domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CX54_EMIHU) HSP 1 Score: 80.9 bits (198), Expect = 9.160e-16 Identity = 41/94 (43.62%), Postives = 56/94 (59.57%), Query Frame = 1
Query: 28 GSAPLERQIRELGSTLHVFGHTHIPIDIGCDGVRYLQWPLGSVAEHSRQCKKMREEGPLVVYSHDGREGGLSPQVPTFWGDYYREHARDVREVS 309
GS LE Q+R+L +H FGHTHIP+D+ DGVRY+QW LG+ E Q + + GP+ +Y DG GG PQ W +Y +ARD+ +
Sbjct: 275 GSDHLEAQLRQLMPDVHCFGHTHIPMDLTLDGVRYVQWSLGTPREQKGQTRVVF--GPMRIY--DGSTGGELPQHWCHWTRHYELYARDLSRTA 364
BLAST of mRNA_H-elongata_contig12058.1580.1 vs. uniprot
Match: A0A7S4E732_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E732_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 1.360e-15 Identity = 42/95 (44.21%), Postives = 52/95 (54.74%), Query Frame = 1
Query: 16 AQTIGSAPLERQIRELGSTLHVFGHTHIPIDIGCDGVRYLQWPLGSVAEHSRQCKKMREEGPLVVYSHDG---REGGLSPQVPTFWGDYYREHAR 291
A+ GS L + L +HVFGHTHIPIDI DG ++QWPLGS E SRQC + + GPL ++ D R G T WG YY + R
Sbjct: 243 AKVSGSDHLGDVVLALRPDVHVFGHTHIPIDIELDGTYHVQWPLGSPREQSRQCARAKALGPLELFRTDTGVRRLGHDGAPERTAWGQYYSDKPR 337
BLAST of mRNA_H-elongata_contig12058.1580.1 vs. uniprot
Match: A0A7S4NQC9_GUITH (Hypothetical protein (Fragment) n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4NQC9_GUITH) HSP 1 Score: 64.7 bits (156), Expect = 7.240e-11 Identity = 27/44 (61.36%), Postives = 35/44 (79.55%), Query Frame = 1
Query: 19 QTIGSAPLERQIRELGSTLHVFGHTHIPIDIGCDGVRYLQWPLG 150
+ +GS +ERQ+R++ S LHVFGHTHIPID+ + VRYLQW LG
Sbjct: 106 KVVGSDLIERQLRQVKSDLHVFGHTHIPIDLDVEHVRYLQWSLG 149 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12058.1580.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig12058.1580.1 >prot_H-elongata_contig12058.1580.1 ID=prot_H-elongata_contig12058.1580.1|Name=mRNA_H-elongata_contig12058.1580.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=77bp MCSDTRIFQSTLAAMAFDTCNGHLEASRNIPDSARRCARRGLLSYTPTTGback to top mRNA from alignment at H-elongata_contig12058:7698..8379- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig12058.1580.1 ID=mRNA_H-elongata_contig12058.1580.1|Name=mRNA_H-elongata_contig12058.1580.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=682bp|location=Sequence derived from alignment at H-elongata_contig12058:7698..8379- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig12058:7698..8379- >mRNA_H-elongata_contig12058.1580.1 ID=mRNA_H-elongata_contig12058.1580.1|Name=mRNA_H-elongata_contig12058.1580.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=462bp|location=Sequence derived from alignment at H-elongata_contig12058:7698..8379- (Himanthalia elongata Himel1 dioecious)back to top |