mRNA_H-elongata_contig80344.15685.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig80344.15685.1 vs. uniprot
Match: D8LGT2_ECTSI (PEra, plastid Era GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGT2_ECTSI) HSP 1 Score: 238 bits (608), Expect = 3.180e-75 Identity = 126/166 (75.90%), Postives = 137/166 (82.53%), Query Frame = 1
Query: 1 LKEGMMNFVQEAMGDADAVLLVTDLFEVDFASPQARRISRKQIFERMLASGKPIVVAVNKVDLLPSDGDGGDGEARLGQLSAARLKEVGSLEDVLLRWQDRLPGATVLPISALEGINTAQLAEELKLHIPEGPPLFATDVMSDKPLRFFATEIIREQIFVSFSQEV 498
L EGMMNFVQEAMGDADA+L VTDLFE +FA+ Q IFERMLA+GKPIVVAVNKVDLLPSDG GDG R G L+A+ KEVGSL+DVL +W++RLPGATVLPISALEGINT LA ELK HIPEGPPLF TDVMSDKP RFFA EIIREQIF SFSQE+
Sbjct: 137 LHEGMMNFVQEAMGDADAILFVTDLFETEFANTQ--------IFERMLAAGKPIVVAVNKVDLLPSDGKSGDGPERPGLLAASTQKEVGSLKDVLGKWEERLPGATVLPISALEGINTVDLAGELKKHIPEGPPLFGTDVMSDKPQRFFAAEIIREQIFGSFSQEI 294
BLAST of mRNA_H-elongata_contig80344.15685.1 vs. uniprot
Match: A0A6H5KDG7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDG7_9PHAE) HSP 1 Score: 239 bits (609), Expect = 3.150e-74 Identity = 127/166 (76.51%), Postives = 135/166 (81.33%), Query Frame = 1
Query: 1 LKEGMMNFVQEAMGDADAVLLVTDLFEVDFASPQARRISRKQIFERMLASGKPIVVAVNKVDLLPSDGDGGDGEARLGQLSAARLKEVGSLEDVLLRWQDRLPGATVLPISALEGINTAQLAEELKLHIPEGPPLFATDVMSDKPLRFFATEIIREQIFVSFSQEV 498
L EGMMNFVQEAMGDADA+L VTDLFE DFA+ Q IFERMLA+GKPIVVAVNKVDLLPSDG GDG R G L+A KEVGSL DVL +W++RLPGATVLPISALEGINT LA ELK HIPEGPPLF TDVMSDKP RFFA EIIREQIF SFSQE+
Sbjct: 235 LHEGMMNFVQEAMGDADAILFVTDLFETDFANTQ--------IFERMLAAGKPIVVAVNKVDLLPSDGKSGDGPERPGLLAAGTQKEVGSLTDVLGKWEERLPGATVLPISALEGINTVDLAGELKKHIPEGPPLFGTDVMSDKPQRFFAAEIIREQIFGSFSQEI 392
BLAST of mRNA_H-elongata_contig80344.15685.1 vs. uniprot
Match: A0A836C977_9STRA (PEra, plastid Era GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C977_9STRA) HSP 1 Score: 162 bits (411), Expect = 3.140e-46 Identity = 85/166 (51.20%), Postives = 114/166 (68.67%), Query Frame = 1
Query: 1 LKEGMMNFVQEAMGDADAVLLVTDLFEVDFASPQARRISRKQIFERMLASGKPIVVAVNKVDLLPSDGDGGDGEARLGQLSAARLKEVGSLEDVLLRWQDRLPGATVLPISALEGINTAQLAEELKLHIPEGPPLFATDVMSDKPLRFFATEIIREQIFVSFSQEV 498
L EGMM FV+EA+GDAD +L +TDLFE +F + I R+ + GKP+VVA+NK+DLLP GG G L S +L+EVGSLE++ RW+++LP A V ISA EG T ++ +E+ H+PE PPL+A D MSD+P+RFFA+EIIREQ+F SQE+
Sbjct: 90 LHEGMMAFVKEAIGDADVLLFLTDLFEKEFPD--------EDILNRINSMGKPLVVAINKIDLLP----GGGGRVTL---SDEKLEEVGSLEEITARWKEQLPTAHVCAISAAEGTGTEEMLKEISRHLPESPPLYAADTMSDRPMRFFASEIIREQVFTCMSQEI 240
BLAST of mRNA_H-elongata_contig80344.15685.1 vs. uniprot
Match: W7U379_9STRA (Gtp-binding protein era n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U379_9STRA) HSP 1 Score: 149 bits (375), Expect = 1.800e-40 Identity = 78/166 (46.99%), Postives = 110/166 (66.27%), Query Frame = 1
Query: 1 LKEGMMNFVQEAMGDADAVLLVTDLFEVDFASPQARRISRKQIFERMLASGKPIVVAVNKVDLLPSDGDGGDGEARLGQLSAARLKEVGSLEDVLLRWQDRLPGATVLPISALEGINTAQLAEELKLHIPEGPPLFATDVMSDKPLRFFATEIIREQIFVSFSQEV 498
L+EGMM FV+E++GDAD VLL+TD+FE R +QIFE M S +P+++AVNK+DLLP+ G L L+ VG+L+DV+ RWQ LP A+++PISA E N +L LK +P PPL+ D ++DKP RFFA+E+IRE++F S+S+E+
Sbjct: 118 LQEGMMAFVKESLGDADVVLLMTDVFE------DPRDFPDQQIFEHMQQSRRPLLLAVNKIDLLPN------ATHPQGNLGKDALERVGTLQDVVARWQAALPNASIIPISAREYFNLDELLASLKEELPPSPPLYPNDTLTDKPQRFFASELIREKLFTSYSKEI 271
BLAST of mRNA_H-elongata_contig80344.15685.1 vs. uniprot
Match: A0A4D9DG82_9STRA (Era-type G domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DG82_9STRA) HSP 1 Score: 147 bits (370), Expect = 1.070e-38 Identity = 77/166 (46.39%), Postives = 109/166 (65.66%), Query Frame = 1
Query: 1 LKEGMMNFVQEAMGDADAVLLVTDLFEVDFASPQARRISRKQIFERMLASGKPIVVAVNKVDLLPSDGDGGDGEARLGQLSAARLKEVGSLEDVLLRWQDRLPGATVLPISALEGINTAQLAEELKLHIPEGPPLFATDVMSDKPLRFFATEIIREQIFVSFSQEV 498
L+EGMM FV+E++GDAD VLL+TD+FE R +QIFE M S +P+++AVNK+DLLP+ G L L+ +G+L+DV+ RWQ LP A+++PISA E N L LK +P PPL+ D ++DKP RFFA+E+IRE++F S+S+E+
Sbjct: 258 LQEGMMAFVKESLGDADVVLLMTDVFE------DPRDFPDQQIFEHMQQSRRPLLLAVNKIDLLPN------ATHPQGNLGKDALERIGTLQDVVARWQAALPNASIIPISARECFNLDGLLASLKEELPPSPPLYPNDTLTDKPQRFFASELIREKLFTSYSKEI 411
BLAST of mRNA_H-elongata_contig80344.15685.1 vs. uniprot
Match: A0A7S2XY85_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XY85_9STRA) HSP 1 Score: 143 bits (360), Expect = 5.420e-38 Identity = 82/171 (47.95%), Postives = 113/171 (66.08%), Query Frame = 1
Query: 1 LKEGMMNFVQEAMGDADAVLLVTDLFEVDFASPQARRISRKQIFERMLASGKPIVVAVNKVDLLPSDGDGGDGEARLGQLSAARLKEVG-SLEDVLLRWQDRLPGA-TVLPISALEGINTAQLAEELKLHIPEGP---PLFATDVMSDKPLRFFATEIIREQIFVSFSQEV 498
L+EGMM FV+ A+ DAD +LLVTD+FE DF + + +R+ S P+V+A+NKVDLL +G G LS LKEVG SL+DV+ RW+++ P A ++LPISAL+GI+T L EEL +P P PLF D ++DKP RFFA+E+IRE++F S+ QE+
Sbjct: 158 LQEGMMKFVKTAVADADVLLLVTDIFERDFPV--------QVLIDRLKRSKSPLVIAINKVDLLKGNGQGKP-------LSERALKEVGGSLDDVVARWREKFPDAKSILPISALQGIDTELLQEELVKQLPPSPNGEPLFPPDTLTDKPERFFASELIRERVFTSYGQEI 313
BLAST of mRNA_H-elongata_contig80344.15685.1 vs. uniprot
Match: A0A6V1N8B9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1N8B9_HETAK) HSP 1 Score: 138 bits (348), Expect = 2.510e-36 Identity = 67/166 (40.36%), Postives = 109/166 (65.66%), Query Frame = 1
Query: 1 LKEGMMNFVQEAMGDADAVLLVTDLFEVDFASPQARRISRKQIFERMLASGKPIVVAVNKVDLLPSDGDGGDGEARLGQLSAARLKEVGSLEDVLLRWQDRLPGATVLPISALEGINTAQLAEELKLHIPEGPPLFATDVMSDKPLRFFATEIIREQIFVSFSQEV 498
L+EGMMNFV+ A+ + DA+LL+TD+FE +F + +R+ + P+++A+NK+D+L + G++SA L+EVG+LE ++ RWQ+ P A ++PISA+EG+ T +L LK H+PEGPPL+ + ++D+ RF E+IRE++F S+ QE+
Sbjct: 155 LQEGMMNFVRGAIKECDALLLMTDIFEKEFPVDI--------LLDRVKRAKVPLIIAINKIDMLET-----------GKMSAETLEEVGNLESIVTRWQESFPAAKIIPISAMEGLETDELVVALKQHLPEGPPLYPEETLTDRSERFIVGEMIREKVFTSYGQEI 301
BLAST of mRNA_H-elongata_contig80344.15685.1 vs. uniprot
Match: A0A8J7QTN7_9BACT (GTPase Era n=1 Tax=Tidjanibacter sp. TaxID=1929085 RepID=A0A8J7QTN7_9BACT) HSP 1 Score: 115 bits (288), Expect = 2.690e-28 Identity = 66/167 (39.52%), Postives = 97/167 (58.08%), Query Frame = 1
Query: 1 LKEGMMNFVQEAMGDADAVLLVTDLFEV-DFASPQARRISRKQIFERMLASGKPIVVAVNKVDLLPSDGDGGDGEARLGQLSAARLKEVGSLEDVLLRWQDRLPGATVLPISALEGINTAQLAEELKLHIPEGPPLFATDVMSDKPLRFFATEIIREQIFVSFSQEV 498
L+E MMNFV A+ DAD +L VTD E D AS ++I E++ SG P++VAVNK+D L + LE V+ +WQ+RLP A V+P+SAL N L + + +PEG P + D ++D+P+RFFA+EIIRE+IF+++ +E+
Sbjct: 68 LQESMMNFVIGALRDADVILYVTDTVEQGDEAS--------EEIVEKISLSGLPVIVAVNKID----------------------LSDPEKLEAVVAKWQERLPRAEVVPVSALHSFNVGGLFDRIVALLPEGEPYYDKDTLTDRPMRFFASEIIREKIFLNYEKEI 204
BLAST of mRNA_H-elongata_contig80344.15685.1 vs. uniprot
Match: A0A350NWB3_9FLAO (GTPase Era n=1 Tax=Flavobacteriales bacterium TaxID=2021391 RepID=A0A350NWB3_9FLAO) HSP 1 Score: 111 bits (277), Expect = 1.580e-26 Identity = 64/166 (38.55%), Postives = 89/166 (53.61%), Query Frame = 1
Query: 1 LKEGMMNFVQEAMGDADAVLLVTDLFEVDFASPQARRISRKQIFERMLASGKPIVVAVNKVDLLPSDGDGGDGEARLGQLSAARLKEVGSLEDVLLRWQDRLPGATVLPISALEGINTAQLAEELKLHIPEGPPLFATDVMSDKPLRFFATEIIREQIFVSFSQEV 498
++EGMM FV+ A+ DAD +LLVTD++E D A P F ++ A P+ V +NK+DL + ++E + WQ RLP ATV PISAL G N L E + +P PP F D +++KP+RFF +EIIRE+I F QE+
Sbjct: 87 MQEGMMKFVKTALQDADLILLVTDIYEDDLAHPDT--------FTKIAAMDIPVFVLINKIDLTDQE---------------------KAMERIAF-WQARLPRATVAPISALHGFNVDSLLERIVEKLPVSPPYFPKDELTNKPMRFFISEIIREKILTHFKQEI 222
BLAST of mRNA_H-elongata_contig80344.15685.1 vs. uniprot
Match: A0A7S3ETQ2_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3ETQ2_9EUKA) HSP 1 Score: 111 bits (277), Expect = 4.600e-26 Identity = 66/166 (39.76%), Postives = 97/166 (58.43%), Query Frame = 1
Query: 1 LKEGMMNFVQEAMGDADAVLLVTDLFEVDFASPQARRISRKQIFERMLASGKPIVVAVNKVDLLPSDGDGGDGEARLGQLSAARLKEVGSLEDVLLRWQDRLPGATVLPISALEGINTAQLAEELKLHIPEGPPLFATDVMSDKPLRFFATEIIREQIFVSFSQEV 498
L+EGMM FV+ ++ DAD +LLV D+F+ F ++I ++ +S ++V +NKVDLL GDG L+ R +G+ E ++ RW+ PGA+VL +SA +G + E L +PE PP F D ++DKP RFFA E++RE IF +SQEV
Sbjct: 142 LQEGMMRFVRSSIIDADVLLLVVDVFQESFPD--------EKILRQLRSSPAAMLVLLNKVDLL------GDGSP----LTKERRAAIGTEEVLIERWRTEFPGASVLSLSARQGRGLDAVMERLMAVLPEHPPFFPKDQLTDKPQRFFAAEMLRESIFELYSQEV 289 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig80344.15685.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig80344.15685.1 >prot_H-elongata_contig80344.15685.1 ID=prot_H-elongata_contig80344.15685.1|Name=mRNA_H-elongata_contig80344.15685.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=163bp MMNFVQEAMGDADAVLLVTDLFEVDFASPQARRISRKQIFERMLASGKPIback to top mRNA from alignment at H-elongata_contig80344:98..2701+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig80344.15685.1 ID=mRNA_H-elongata_contig80344.15685.1|Name=mRNA_H-elongata_contig80344.15685.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2604bp|location=Sequence derived from alignment at H-elongata_contig80344:98..2701+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig80344:98..2701+ >mRNA_H-elongata_contig80344.15685.1 ID=mRNA_H-elongata_contig80344.15685.1|Name=mRNA_H-elongata_contig80344.15685.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=978bp|location=Sequence derived from alignment at H-elongata_contig80344:98..2701+ (Himanthalia elongata Himel1 dioecious)back to top |