prot_H-elongata_contig7998.15648.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig7998.15648.1
Unique Nameprot_H-elongata_contig7998.15648.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length111
Homology
BLAST of mRNA_H-elongata_contig7998.15648.1 vs. uniprot
Match: A0A6H5JJG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJG9_9PHAE)

HSP 1 Score: 126 bits (316), Expect = 1.970e-31
Identity = 61/72 (84.72%), Postives = 64/72 (88.89%), Query Frame = 0
Query:    1 MVCTTLYTQFMELYFKWNKPLGDVFIQMDNTVSENKNNHIMGFLAALVARGVMRSVTLCFMMVGHTHIKIDQ 72
            MVCTTL+T FMEL  +W   LGDVFIQMDNTVSENKNN IMGFLAALV RGVMRSVTLCFMMVGHTHI+IDQ
Sbjct:  462 MVCTTLFTLFMELTLQWKHSLGDVFIQMDNTVSENKNNFIMGFLAALVGRGVMRSVTLCFMMVGHTHIQIDQ 533          
BLAST of mRNA_H-elongata_contig7998.15648.1 vs. uniprot
Match: A0A6H5KL03_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL03_9PHAE)

HSP 1 Score: 111 bits (278), Expect = 2.650e-26
Identity = 51/72 (70.83%), Postives = 60/72 (83.33%), Query Frame = 0
Query:    1 MVCTTLYTQFMELYFKWNKPLGDVFIQMDNTVSENKNNHIMGFLAALVARGVMRSVTLCFMMVGHTHIKIDQ 72
            +V T LY QFMEL   W   LGDV +Q+DNTVSENKNN++MG LAA+V RG+MR+VTLCFMMVGHTHI+IDQ
Sbjct:  192 LVATALYYQFMELTLSWGHTLGDVTVQVDNTVSENKNNYLMGILAAMVGRGIMRTVTLCFMMVGHTHIQIDQ 263          
BLAST of mRNA_H-elongata_contig7998.15648.1 vs. uniprot
Match: A0A6H5L233_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L233_9PHAE)

HSP 1 Score: 99.8 bits (247), Expect = 1.410e-23
Identity = 45/72 (62.50%), Postives = 56/72 (77.78%), Query Frame = 0
Query:    1 MVCTTLYTQFMELYFKWNKPLGDVFIQMDNTVSENKNNHIMGFLAALVARGVMRSVTLCFMMVGHTHIKIDQ 72
            +V T L+ QFMEL   W   L DV + +DNTV+EN NN+ MG LAA+V RG+MR+VTLCFMMVGHTHI++DQ
Sbjct:    9 LVATALHYQFMELTLSWGHTLVDVTVHVDNTVAENMNNYFMGILAAMVGRGIMRTVTLCFMMVGHTHIQVDQ 80          
BLAST of mRNA_H-elongata_contig7998.15648.1 vs. uniprot
Match: A0A6H5KN27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN27_9PHAE)

HSP 1 Score: 75.9 bits (185), Expect = 2.330e-14
Identity = 36/77 (46.75%), Postives = 49/77 (63.64%), Query Frame = 0
Query:    1 MVCTTLYTQFMELYFKWNKP-----LGDVFIQMDNTVSENKNNHIMGFLAALVARGVMRSVTLCFMMVGHTHIKIDQ 72
            +VCT L+     L   W KP     +  + +Q+DN V ENKNN ++ F+  LVA GV+ S  +CF++VGHTHIKIDQ
Sbjct:   13 LVCTALWLALKRLSAMWTKPGQRFYIKRLHLQLDNCVGENKNNIVLAFIGGLVAAGVIGSAEVCFLIVGHTHIKIDQ 89          
BLAST of mRNA_H-elongata_contig7998.15648.1 vs. uniprot
Match: A0A6H5KAY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAY2_9PHAE)

HSP 1 Score: 75.9 bits (185), Expect = 8.830e-14
Identity = 36/77 (46.75%), Postives = 49/77 (63.64%), Query Frame = 0
Query:    1 MVCTTLYTQFMELYFKWNKP-----LGDVFIQMDNTVSENKNNHIMGFLAALVARGVMRSVTLCFMMVGHTHIKIDQ 72
            +VCT L+     L   W KP     +  + +Q+DN V ENKNN ++ F+  LVA GV+ S  +CF++VGHTHIKIDQ
Sbjct:   13 LVCTALWLALKRLSAMWTKPGQRFYIKRLHLQLDNCVGENKNNIVLAFIGGLVAAGVIGSAEVCFLIVGHTHIKIDQ 89          
BLAST of mRNA_H-elongata_contig7998.15648.1 vs. uniprot
Match: A0A6H5JAR9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAR9_9PHAE)

HSP 1 Score: 73.6 bits (179), Expect = 5.710e-13
Identity = 37/83 (44.58%), Postives = 52/83 (62.65%), Query Frame = 0
Query:    3 CTTLYTQFMELYFKWNKPLGDVF------IQMDNTVSENKNNHIMGFLAALVARGVMRSVTLCFMMVGHTHIKIDQQNTYIYI 79
            CTTL+     L   W KP G+ F      +Q+DN V ENKNN +M F+  LVA GV+    +CF+++GHTHIKIDQ  + +++
Sbjct:   15 CTTLWLALKRLSAMWTKP-GERFHIKRRHLQLDNCVGENKNNIVMAFIGGLVAAGVIGFAEVCFLILGHTHIKIDQVFSRLFV 96          
BLAST of mRNA_H-elongata_contig7998.15648.1 vs. uniprot
Match: A0A6H5KA02_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA02_9PHAE)

HSP 1 Score: 70.9 bits (172), Expect = 5.300e-12
Identity = 35/77 (45.45%), Postives = 48/77 (62.34%), Query Frame = 0
Query:    1 MVCTTLYTQFMELYFKWNKP-----LGDVFIQMDNTVSENKNNHIMGFLAALVARGVMRSVTLCFMMVGHTHIKIDQ 72
            +VCT L+     L     KP     +  + +Q+DN V ENKNN ++ F+  LVA GV+ S  +CF++VGHTHIKIDQ
Sbjct:  125 LVCTALWLALKRLSAMGTKPGQRFYIKRLHLQLDNCVGENKNNIVLAFIGGLVAAGVIGSAEVCFLIVGHTHIKIDQ 201          
BLAST of mRNA_H-elongata_contig7998.15648.1 vs. uniprot
Match: A0A6H5JXN7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXN7_9PHAE)

HSP 1 Score: 63.9 bits (154), Expect = 1.420e-9
Identity = 29/56 (51.79%), Postives = 37/56 (66.07%), Query Frame = 0
Query:   17 WNKPLGDVFIQMDNTVSENKNNHIMGFLAALVARGVMRSVTLCFMMVGHTHIKIDQ 72
            W + L       DN V ENKNN ++ F+  LVA GV+ S  +CF++VGHTHIKIDQ
Sbjct:  201 WPEVLHQASPPSDNCVGENKNNIVLAFIGGLVAAGVIGSAEVCFLIVGHTHIKIDQ 256          
BLAST of mRNA_H-elongata_contig7998.15648.1 vs. uniprot
Match: A0A6H5JTH9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTH9_9PHAE)

HSP 1 Score: 63.5 bits (153), Expect = 1.970e-9
Identity = 32/76 (42.11%), Postives = 45/76 (59.21%), Query Frame = 0
Query:    1 MVCTTLYTQFMELYFKWNKP-----LGDVFIQMDNTVSENKNNHIMGFLAALVARGVMRSVTLCFMMVGHTHIKID 71
            +VCT L+     L   W KP     +  + +Q+ N V E KNN ++ F+  LVA GV+ S  +CF++VGHT IKID
Sbjct:  287 LVCTALWLALKRLSAMWAKPGQRFYIKRLHLQLHNCVGEKKNNIVLAFIGGLVAAGVVVSAEVCFLIVGHTLIKID 362          
BLAST of mRNA_H-elongata_contig7998.15648.1 vs. uniprot
Match: A0A6H5JCW3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCW3_9PHAE)

HSP 1 Score: 62.4 bits (150), Expect = 4.960e-9
Identity = 29/46 (63.04%), Postives = 34/46 (73.91%), Query Frame = 0
Query:   27 QMDNTVSENKNNHIMGFLAALVARGVMRSVTLCFMMVGHTHIKIDQ 72
            Q+DN  SENKNN  +GF   LVA  V+R V + FMMVGHTH+KIDQ
Sbjct:   20 QVDNCASENKNNFFLGFAGLLVAASVIRVVEINFMMVGHTHMKIDQ 65          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7998.15648.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
A0A6H5JJG9_9PHAE1.970e-3184.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KL03_9PHAE2.650e-2670.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L233_9PHAE1.410e-2362.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KN27_9PHAE2.330e-1446.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KAY2_9PHAE8.830e-1446.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JAR9_9PHAE5.710e-1344.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KA02_9PHAE5.300e-1245.45Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JXN7_9PHAE1.420e-951.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTH9_9PHAE1.970e-942.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JCW3_9PHAE4.960e-963.04Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33153FAMILY NOT NAMEDcoord: 25..72
NoneNo IPR availablePANTHERPTHR33153:SF3coord: 25..72
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 40..63
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..39
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 64..110

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7998contigH-elongata_contig7998:652..1134 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7998.15648.1mRNA_H-elongata_contig7998.15648.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig7998 325..2279 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig7998.15648.1 ID=prot_H-elongata_contig7998.15648.1|Name=mRNA_H-elongata_contig7998.15648.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=111bp
MVCTTLYTQFMELYFKWNKPLGDVFIQMDNTVSENKNNHIMGFLAALVAR
GVMRSVTLCFMMVGHTHIKIDQQNTYIYICPLFHKRHTHVPCAIISYFDF
VAPTRKQIIT*
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