mRNA_H-elongata_contig7984.15635.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig7984.15635.1 vs. uniprot
Match: D7FVV7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVV7_ECTSI) HSP 1 Score: 654 bits (1686), Expect = 1.340e-205 Identity = 435/847 (51.36%), Postives = 545/847 (64.34%), Query Frame = 1
Query: 1 VSLCLPSAELSSKLGWVPSFVVKALGYRDDWGLRAKVLELLDAYIVPKHLSDEARAIGMAHLRHGMDPPARQGLAWILQDKKKVRGEVLRYLDARDAHKASLKNKVSSAXXXXXXXXMRLVTIMALHPT---NGTKMTPLHDLNNKVDKKVFRLLRTVCGADASHATVAAARSELLKKVGSRTVLGEYVRTLAYRCSVLSVGAAGFQQLCLACKKGLEDEDEQSYLPPLGLLETLVGVFPEQAKGQHEHLAAMFLAAQASGIEGEATRVLSLIAAGRWSSDRKGPGADRGAGGCAKRVGGKDAGDEEG-----IPDEFLEALVTICAKESNNPAQAPIAVRALAALSNADNEEMGEAARFAALDALRQAAASAVAAGV-------AVGKRSRVPSNHGAAAATSLAALSAFAQEFPKEFQRYEQKVLAFVTARIRGEGRGADGLEADMAVGSGGKGGXXXXXXXXRKAASGETGAILPRCQTLCFSIELACSCLMPTG----AGGGRAARATAASLEVESLLTRVFLLLKAEGQPP--GESEMTSEEAEALRLVGSTCVARLCMGGGSVMTSLSPKRWHALAWTMMDPSERVRAGFMREVCRGLEQTCGGGAGNSGTSKLRFMAYLCLAAFEAEPLRSEARLALAKKVRQMRLAHAAXXXXXXXXXXXXXXXXXXXXXXXXXRSGAGAAT-------------ALEAAMPEGVLPYVIHLLAHHPDFPVDKASCLRDDKLRMKNLQRYLEFLLGPLVGQGQ---EADNLSMLLQTLDTIVTSYQDALEPSSNRIHVTARVARQLLTNRIRTQSNLQPYPGKIFLPVPLFQRRARSLPEAPNLSPSPS 2430
+SL P AEL+SKLGWVP+ VVKA + ++K++ +LD I+P L DEARA +AHL HGMD A+ G+ WILQDK+ VRG VLRYLDARDA KA+ A M +V LHP+ +G ++T L DL +K DKK+FRLLRTVC DA H+ AAAR +L+KKVG++T LG Y++TL+ RCS L++ AGFQ+LCLAC++G+E+ D+ +LPPLGLLE +V VFPEQA+GQ +LA++FL A+ +G E TRVL+++A +PD FL++LV +C K+ P++A AVRALAAL++ + + GEAARF+ALDALR+ A A GK+ R G AT + AL+AFA+EFP+EF+R+E K L+F AR+ G +G E + XXXXXXXX AA+ A+ P C TLC SI+LAC+CLM G GG R E+ L+ VF LLKA+GQP GE EM E LRL GST V RLC+ +V T L+P RWH+LAWT+MDPS +VR GFMREVCRGLEQT G AG G S LRFMAYLCL AFE+EP+R +A LA+A VRQ+RLAH XXXXXXXXXXXXXXXXXXXXXX ALE +MPE VLPY IHLLA+HPDFP K DDK R+KNL++YL FL+ PL+G G+ EADN+SMLLQ LDTI TSY+DAL+PS+NRIH+TAR+ARQLL ++I+TQS+LQPYPG IFLP PLFQRR R E P+ S SPS
Sbjct: 501 ISLKRPPAELTSKLGWVPASVVKATAVHGEVDTKSKMVHILDENIIPNDLRDEARAAVLAHLLHGMDQQAKNGVTWILQDKRNVRGAVLRYLDARDAFKATRATSEDKALEAKLDAAMAVVA--RLHPSTSPSGKQLTLLRDLAHKQDKKIFRLLRTVCSPDAPHSVTAAARVDLIKKVGTQTGLGMYLKTLSTRCSALAMSPAGFQELCLACRRGMEEGDDGVFLPPLGLLEAMVKVFPEQARGQEGNLASVFLVAEENGYREEMTRVLAVVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELPDGFLDSLVKLCTKDGA-PSEAAAAVRALAALASRPDTQAGEAARFSALDALRETAXXXXXXXXXXXXXXXAPGKKCR----DGGVGATEVTALAAFAREFPREFERHEGKALSFAMARMSGAIGVGEGREDEXXXXXXXXXXXXXXXXXXXAAAT----AVSPACLTLCASIKLACNCLMAPGRATDVSGGAEDRG-------EAWLSTVFALLKADGQPESDGEREMGEAERAELRLAGSTRVVRLCVNSANVQTLLTPHRWHSLAWTLMDPSAKVRLGFMREVCRGLEQT--GAAGERGPSTLRFMAYLCLMAFESEPIRKKATLAVANNVRQLRLAHQRATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALERSMPEYVLPYAIHLLAYHPDFPAHK-----DDKQRIKNLEKYLNFLIEPLIGAGRQTGEADNMSMLLQMLDTITTSYRDALDPSNNRIHLTARIARQLLLSKIKTQSDLQPYPGNIFLPAPLFQRRCRE-DETPSSSSSPS 1321
BLAST of mRNA_H-elongata_contig7984.15635.1 vs. uniprot
Match: A0A6H5KWB1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWB1_9PHAE) HSP 1 Score: 612 bits (1579), Expect = 2.340e-190 Identity = 414/832 (49.76%), Postives = 509/832 (61.18%), Query Frame = 1
Query: 1 VSLCLPSAELSSKLGWVPSFVVKALGYRDDWGLRAKVLELLDAYIVPKHLSDEARAIGMAHLRHGMDPPARQGLAWILQDKKKVRGEVLRYLDARDAHKASLKNKVSSAXXXXXXXXMRLVTIMALHPT---NGTKMTPLHDLNNKVDKKVFRLLRTVCGADASHATVAAARSELLKKVGSRTVLGEYVRTLAYRCSVLSVGAAGFQQLCLACKKGLEDEDEQSYLPPLGLLETLVGVFPEQAKGQHEHLAAMFLAAQASGIEGEATRVLSLIAAGRWSSDRKGPGADRGAGG---------CAKRVGGKDAGDEEGIPDEFLEALVTICAKESNNPAQAPIAVRALAALSNADNEEMGEAARFAALDALRQAAASAVAAGVAVGKRSRVPS---NHGAAAATSLAALSAFAQEFPKEFQRYEQKVLAFVTARIRGE---GRGADGLEADMAVGSGGKGGXXXXXXXXRKAASGETGAILPRCQTLCFSIELACSCLMPTGAGGGRAARATAASLEVESLLTRVFLLLKAEGQPP--GESEMTSEEAEALRLVGSTCVARLCMGGGSVMTSLSPKRWHALAWTMMDPSERVRAGFMREVCRGLEQTCGGGAGNSGTSKLRFMAYLCLAAFEAEPLRSEARLALAKKVRQMRLAHAAXXXXXXXXXXXXXXXXXXXXXXXXXRSGAGAAT---------------ALEAAMPEGVLPYVIHLLAHHPDFPVDKASCLRDDKLRMKNLQRYLEFLLGPLVGQGQ---EADNLSMLLQTLDTIVTSYQDALEPSSNRIHVTARVARQLLTNRIRTQSNLQPYPGKIFLPVPLFQR 2382
+SL P AEL SKLGWVP+ VVKA + ++K++ +LD IVP L DEARA +AHL HGMD A+ G+ WILQDK+ VRG VLRYLDARDA KA+ A M V LHP+ +G ++T L DL +K DKK+FRLLRTVC DA H+ AAAR +L+KKVGS+T LG Y++TL+ RCS L++ AGFQ+LCLAC++G+E+ D+ +LPPLGLLE +V VFPEQA+GQ +LA++FL A+ +G E TRVL+++AA R G D G GG +PD FL++LV +C KE P++A AVRAL G AT + AL+AFA+EFP+EF+RYE K L+F AR+ G G G D XXXXXXXX A+ P C TLC SI+LAC+CLM G + A E+ L VF LLKA+GQP GE EM E LRL GST + RLC+ +V T L+P RWH+LAWT+MDPS +VR GFMREVCRGLEQT G AG G S LRFMAYLCL AFE EP+R +A LA+A +RQ+RLAH XXXXXXXXXXXXXXXXXXXXXX ALE +MPE VLPY IHLLA+HPDFPV KA DDK R+KN+++YL FL+ PL+G G+ EADN+SMLLQ LDTI TSY+DAL+PS+NRIH+TAR+ARQLL ++I+TQS+LQPYPG IFLP PLFQR
Sbjct: 362 ISLKRPPAELMSKLGWVPASVVKATAVHGEVDTKSKMVHILDENIVPSDLRDEARAAVLAHLLHGMDQQAKNGVTWILQDKRNVRGAVLRYLDARDAFKATRATSEDKALEAELDAAMAAVA--RLHPSTSPSGKQLTLLRDLAHKQDKKIFRLLRTVCSPDAPHSVTAAARVDLIKKVGSQTGLGMYLKTLSTRCSALAMSPAGFQELCLACRRGMEERDDGVFLPPLGLLEAMVKVFPEQARGQEGNLASVFLVAEENGYREEMTRVLAVLAACRRPP---GEAEDVGMGGKXXXXXXXXXXXXXXXXXXXXXXELPDGFLDSLVKLCTKEGA-PSEAAAAVRALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCRSGGVGATEVTALAAFAREFPREFERYEGKALSFAMARMSGTIGVGEGRDDXXXXXXX-------XXXXXXXXXXXXXXXATAVSPACLTLCASIKLACNCLMAPGRATDVSGGAEGTG---EAWLRTVFALLKADGQPESEGEREMGEAERAELRLAGSTRIMRLCVNSANVQTLLTPHRWHSLAWTLMDPSAKVRLGFMREVCRGLEQT--GVAGERGPSTLRFMAYLCLTAFEPEPIRKKATLAVANNIRQLRLAHQRATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALERSMPEYVLPYAIHLLAYHPDFPVHKARGNFDDKQRIKNMEKYLNFLIEPLIGAGRQTGEADNMSMLLQMLDTITTSYRDALDPSNNRIHLTARIARQLLLSKIKTQSDLQPYPGNIFLPAPLFQR 1175
BLAST of mRNA_H-elongata_contig7984.15635.1 vs. uniprot
Match: A0A836C8V2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8V2_9STRA) HSP 1 Score: 246 bits (628), Expect = 1.650e-62 Identity = 265/885 (29.94%), Postives = 378/885 (42.71%), Query Frame = 1
Query: 16 PSAELSSKLGWVPSFVVKALGYRDDWGLRAKVLELLDAYIVPKHLSDEARAIGMAHLRHGMDPPARQGLAWILQDKKKVRGEVLRYLDARDAHKASLKNKVSSAXXXXXXXXMRLVTIMALHPTNGTKMTPLHDLNNKVDKKVFRLLRTVC----GADASHATVAAARSELLKKVGSRTVLGEYVRTLAYRCSVLSVGAAGFQQLCLACKKGLEDEDEQSYLPPLGLLETLVGVFPEQAKGQHEHLAAMFL-AAQASGIEGEATRVLSLIAAGRWSSDRKGPGADRGAGGCAKRVGGKDAGDEEGIPDEFLEAL-VTICAKESNNPAQAPIAVRALAALSNADNEEMGEAARFAALDALRQAAASAVAAGVAVGKRSRVPSNHGAAAATSLAALSAFAQEFPKEFQRYEQKVLAFVTARIRGEGRGADGLEADMAVGSGGKGGXXXXXXXXRKAASGETGAILPRC-----------------------QTLCFSIELACSCLMPTGAG--------------------GGRAARATAASLE-VESLLTRVFLLLKAEGQPPGESEMTSEEAEALRLVGSTCVARLCMGGGSVMTSLSPKRWHALAWTMMDPSERVRAGFMREVCRGLEQTCGGGAGNSGTSKLRFMAYLCLAAFEAEPLRSEARLALAKKVRQMRLAHAAXXXXXXXXXXXXXXXXXXXXXXXXXRSGAGAATALEAAMPEGVLPYVIHLLAHHPDFPVDKASCLRDDKLRMKNLQRYLEFLLGPLV-GQ--GQEADNLSMLLQTLDTIVT---------------------------SYQDALEPSSNRIHVTARVARQLLTNRIR------------TQSNLQPYPGKIFLPVPLFQRRARS 2394
P A++ +KL WVP+ VVK+ RD L++++L+L+D ++P + RA G L G D AR G+ +L+D+++ R VLRYL RD K K ++ I AL PT + LH L+ + DKK+F+LLR++C A A+ A AAAR +L+K+VGS+T LG+Y+ L RC++ S GA FQ++ C+ GLE+ DE+ Y P L ++ GVFP + Q L ++ A + + T ++ L++ R G G+ GAG + +P F L V I + + A+A AVRA+ AL DN + L++ A+ R+ + HG +LAAL FA + F + V FV + G K +AA+ E Q + + L + L+P G A +T A E LL + L G PPG + + E +RL +TC+ L M + LS +RWH LA+T+ D VR F +E+ R + N+ + R+ A LCL E E R EAR ALA +R MR HAA XXXXXXXXXX AL +PE VLP +H+LAH P L ++ +Q+ L FLL L+ GQ G +ADNLS LLQ ++TI T SY DA+ P S ++HV A AR L +R+ T NLQPYP +IFLP +F R S
Sbjct: 580 PPADVEAKLSWVPASVVKSYSLRDA-ELQSRLLQLVDDILLPTRETPAVRAAGAVALWRGFDAAARTGVQRMLEDRRRCREAVLRYLVLRDTAK---KTAAAAKAEREEQVEEAFRAIAALVPTPDGQTDVLHRLHEQRDKKIFQLLRSLCEDGEAAAATAAAPAAAREDLVKRVGSKTALGDYLMALTRRCALFSFGAGMFQEVVQVCRVGLEERDEELYTPALEVMAMQAGVFPAHLRAQLGGLLPLYKEAGELADAPEVQTAIMKLMS---HMPRRDGGGSGSGAG--------------DAVPAAFKRQLQVAITSTGAAEHAEA--AVRAMGALLPEDNPLIAAT--------LKELASP------------RLLAPHGERLGPTLAALRVFALRHARAFAPHADAVARFVEEHVVGPAXXXXXXXXXXXXXXXXK---------AAQAAADEPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLIAPGLRLLSARLLPXXXXXXXXXXXXXXXXXXXXXXXXGSTAVLSTKAVKERAAKLLGLLLAALDDGGAPPGWTTLDDESKAEVRLAAATCILEL-MCRSHLQPLLSAQRWHTLAYTLCDEDASVRERFAQELARAV---------NNRMATHRYAAMLCLVGAEPEAARREARAALAAWLRHMRSHHAAQSAAAKSXXXXXXXXXXERE-------------ALSVLLPEYVLPCALHMLAHLPGL-----GNLAEEGPGAHKMQKCLAFLLQCLMEGQDCGGDADNLSFLLQMINTIRTRLVXXXXXXXXXXXXXXXXXXXXXXXXSYCDAMAPDSGQLHVVADAARAFLLSRVXXXXXXXXXXXXXTPENLQPYPVQIFLPTDMFAHRVPS 1384
BLAST of mRNA_H-elongata_contig7984.15635.1 vs. uniprot
Match: W7TFJ9_9STRA (Sister chromatid cohesion protein pds5 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TFJ9_9STRA) HSP 1 Score: 197 bits (500), Expect = 3.290e-47 Identity = 229/875 (26.17%), Postives = 362/875 (41.37%), Query Frame = 1
Query: 25 ELSSKLGWVPSFVVKALGYR-DDWGLRAKVLELLDAYIVPKHLSDEARAIGMAHLRHGMDPPARQGLAWILQDKKKVRGEVLRYLDARDAHKASLKNKVSSAXXXXXXXXMRLVTIMALHPTNGTKMTPLHDLNNKVDKKVFRLLRTVCGADASHATVAAARSELLKKVGSRTVLGEYVRTLAYRCSVLSVGAAGFQQLCLACKKGLE-----DEDEQSYLPPLGLLETLVGVFPE-QAKGQHEHLAAMFLAAQASGIEGEATRVLSLIAAG-RWSSDRKGPGADRGAGGCAKRVGGKDAGDEEGIPDEFLEALVTICAKESNNPAQAPIAVRALAALSNADNEEMGEAARFAALDALRQAAASAVAAGVAVGKRSRVPSNHGAAAATSLAALSAFAQEFPKEFQRYEQKVLAFVTARIRGEGRGADGLEADMAVGSG------GKGGXXXXXXXXRKAASGETGAILPRCQTLCFSIELACSCLM-----------------------------PTGAGGGRAAR-------------------ATAASLEVES---------LLTRVFLLLKAEGQPPGESEMTSEEAEALRLVGSTCVARLCMGGGSVMTSLSPKRWHALAWTMMDPSERVRAG-FMREVCRGLEQTCGGGAGNSGTSKLRFMAYLCLAAFEAE-PLRSEARLALAKKVRQMRLAHAAXXXXXXXXXXXXXXXXXXXXXXXXXRSGAGAATALEAAMPEGVLPYVIHLLAHHPDFPVDKASCLRDDKLRMKNLQRYLEFLLGPLVGQ-GQEADNLSMLLQTLDTIVTSYQDAL-----------------EPSSNRIHVTARVARQLLTNRIRTQSNLQPYPGKIFLPVPLF 2376
+L KLGW+P V+ LGY D LR +L++ D ++PK + R G+ + H + A + L +LQD+ V+ V YL AR + +A + +++ + + +GT + PL LN D++ +LL+T+ V AR +L KVGS++VLGEYVR LA R + L ++ LE DE+E + + L E L+ FP ++ + L + A + ++ R+++ A G R+ +D K R+ E + F + + + K + A +AV AL L + E AR L L A + ++ V R L AL+ A+ P+ F+ + +V AF ++ R + ++D SG G G K + G + C C +I+ + ++ P G R + ++ +EV +L +F +LKAEG+ P E++ ++ LR+V + + +L L RW +LAW M+DP E AG F R++ R + S L+F+A L LAA E + R EAR A+ + V+ +R A+ S + MPE +LPY++HLLAH PDFP D +R + +QR L F+L PL+ G EADNLS LL DTI+T Y+DA + ++ R+H RV R+ L ++I+TQ NLQ YPGKI+LP+PL+
Sbjct: 449 DLEEKLGWIPGTVL--LGYSLPDSELRLSILQVFDEVMLPKAADCQVRTTGLLFMWHRLTADANRALRAVLQDQAMVQALVNEYLAARSSWRADMDDELREVRLQECGEALLEAVPVLDRRASGTSL-PLK-LNETKDQQAPKLLQTIMDPRQPSNRVLKARDDLAAKVGSKSVLGEYVRVLARRATSCFANQETLADLIQLARELLENGEGGDEEENTLEGAVALTELLIESFPVLMSEALPQLLMLCWTAGKEENLQVRLLRLVATRAKGARYLADMK----------IGHRLTSLTVKGEAEMLSNFRQGTLKVVLKNGSTKASR-LAVSALCEL--VPDPEDAVYARL--LRELTSAKSLSL-----VNPRLEA----------MLRALAVLAERHPRTFETHAARVRAFALRKVLLY-RASSNNDSDDESASGALPQLMGSGKTHSKKKQATKDSPHSRG-LSEECTRACAAIKFLVAHVLGLRAEYAAMREDSVFLPKSTMDKADRDRSPRSRNGERVHKNEDSRQLRDHDGERSSYLNENSSLVEVSQDELEASASEVLDLLFKILKAEGRLPSRVELSKKDKARLRIVSAGGILKLMRNQYVQHRLLDAPRWRSLAWIMLDPEEITVAGAFTRKLARAVR---------SSRVHLKFLALLSLAALEEDVAARREARQAVTRAVQNLRQAYEEYMAGQEEEP-----------------SEEAKRKVTTSMMPEYLLPYLLHLLAHFPDFPTSP-----HDSVRWRPIQRCLAFVLEPLMATLGTEADNLSFLLLMTDTILTRYKDASAAIKRQEKEKNSLINEDDVATERLHQVTRVCREFLRSKIKTQENLQAYPGKIYLPLPLY 1256
BLAST of mRNA_H-elongata_contig7984.15635.1 vs. uniprot
Match: D0NH43_PHYIT (Sister chromatid cohesion protein PDS5 n=3 Tax=Phytophthora infestans TaxID=4787 RepID=D0NH43_PHYIT) HSP 1 Score: 152 bits (384), Expect = 1.620e-33 Identity = 213/821 (25.94%), Postives = 331/821 (40.32%), Query Frame = 1
Query: 13 LPSAELSSKLGWVPSFVVKALGYRDDWGLRAKVLELLDAYIVPKHLSDEARAIGMAHLRHGMDPPARQGLAWILQDKKKVRGEVLRYLDAR--DAHKASLKNKVSSAXXXXXXXXMRLVTIMALHPTNGTKMTPL-HDLNNKVDKKVFRLLRTVCGADASHATVAAARSELLKKVGSRTVLGEYVRTLAYRCSVLSVGAAGFQQLC--LACKKGLEDEDEQSYLPPLGLLETLVGVFPEQ-AKGQHEHLAAMFLAAQA--SGIEGE-------------ATRVLSLIAAGRWSSDRKGPGADRGAGGCAKRVGGKDAGDEEGIPDEFLEALVTICAKESNNPAQAPIAVRALAALSNADNEEMGEAARFAALDALRQAAASAVAAGVAVGKRSRVPSNHGAAAATSLAALSAFAQEFPKEFQRYEQKVLAFVTARIRGEGRGADGLEADMAVGSGGKGGXXXXXXXXRKAASGETGAILPRCQTLCFSIELACSCLMPTGAGGGRAARATAASLEVESLLTRVFLLLKAEGQPPGESEMTSEEAEALRLVGSTCVARLCMGGGSVMTSLSPKRWHALAWTMMDPSERVRAGFMREVCRGLEQTCGGGAGNSGTSKLRFMAYLCLAAFEAEP-LRSEARLALAKKVRQMRLAHAAXXXXXXXXXXXXXXXXXXXXXXXXXRSGAGAATALEAAMPEGVLPYVIHLLAHHPDFPVDK----------ASCLRDDKLRMKNLQRYLEFLLGPLVG-QGQEADNLSMLLQTLDTIVTSYQDALEPSSNRIHVTARVARQLLTNRIRTQSNLQPYPGKIFLPVPLF 2376
+P+ + KLGW+P FV+K Y L+ +V++LLD +++PK LS+ RA G+ L H +D +R+ L +L ++ K + +++ + HK +A +L +A ++ +K+ L L+ D F+ L +C + AR +L++ VGS+T LGE+++ L + S+L++ L L K+ + +S + LL G PE A + +AA+ + ++ SG E E A VL+ + W++ GPG D D E + L C +S+ AQ + A E A +A +A +A G K P + A SL L+ E + + + G+G D SG R A+ + RC + ++ L C P A E +L+ +F +L ++G+ T + ALR S C + + SLS WH L WT+ D SE VR F++++ L + + G ++++YL LAA +A P ++ A+ L V +MR A S G AL +PE LPYVIHLLAHHP FPV +S L D+L YL F L LV ADN++ LLQ L T ++ D PS I+ A LL RI++QSNL+P+PGKIFLP L+
Sbjct: 522 IPTGNIK-KLGWIPDFVLKCYAYPQQ-ELKLRVVQLLDDFLLPKALSEATRANGLLFLFHSLDATSREALRRVLSERAKCQQVCRTFVEFKVTSRHKGRASGGDEAALEQAK---QQLCDGLAPLFSDVSKLDKLVEQLSTWKDHSAFKHLGDLCDFSKTQREAREARDQLVRCVGSKTPLGEFLKKLCRKLSLLTMSQKSVAVLLEFLVLKEARVARENRSVVD---LLVMASGELPELFAPFVRDEIAAVLVDSKGDVSGEEDEDETAPKDPRVILGALHVLANYSR-HWAAT-SGPGDDE---------------DRNTPSAELSQQLENFCLGDSDVEAQN---------FNAAKESRAAELAAYAIAHFYERAETTAQLVGRLCSKTK--PKSGALPALQSLEVLTKHCSHVLTEDGELFSCLWTNLVDDVIGKG--------DQVSTSGSSAAKDRTPKGSRSTAA---KLVEVRCAAVKVAVNLLVYCWSP------------AFQQEASTLIQLLFGVLHSDGKTFAS---TPAQTAALRATAS-CGLMKIVRNRQLEASLSLSEWHTLGWTLQDSSEDVRRKFLKKLTSHLVK-------HLGQHPHKYLSYLALAATDASPSVKKSAKSLLKLAVERMRHLFDAASSRDST-------------------SNPGRMAAL--MVPEYALPYVIHLLAHHPSFPVKLVERTSTVEVLSSALWADQLA------YLSFFLDGLVATNAAAADNIAFLLQML-TKLSQCHDVAAPSDINIYPLIDSAAVLLKKRIKSQSNLKPFPGKIFLPKHLY 1244
BLAST of mRNA_H-elongata_contig7984.15635.1 vs. uniprot
Match: A0A5D6XI70_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XI70_9STRA) HSP 1 Score: 149 bits (377), Expect = 1.240e-32 Identity = 221/839 (26.34%), Postives = 350/839 (41.72%), Query Frame = 1
Query: 13 LPSAELSSKLGWVPSFVVKALGYRDDWGLRAKVLELLDAYIVPKHLSDEARAIGMAHLRHGMDPPARQGLAWILQDKKKVRGEVLRYLDARDAHKASLKNKVSSAXXXXXXXXMR------LVTIMALHPTNGTKMTPLHDLNNKVDKKVFRLLRTVCGADASHATVAAARSELLKKVGSRTVLGEYVRTLAYRCSVLSVGAAGFQQ-LCLACKKGLEDEDEQSYLPPLGLLET--LVGVFPEQAKGQHEHLAAMFLAAQASGIEGEATRVLSLIAAGRWSSDRKGPGADRGAGGCAKRVGGKDAGDEEGIPDE--------------FLEALVTICAKES-------NNPAQ--APIAVRALAALSNADNEEMGEAARFAALDALRQAAASAVAAGVAVGKRSRVPSNHGAAAATSLAALSAFAQEFPKEFQRYEQKVLAFVTARIRGEGRGADGLEADMAVGSGGKGGXXXXXXXXRKAASGETGAILPRCQTLCFSIELACSCLMPTGAGGGRAARATAASLEVESLLTRVFLLLKAEGQPPGESEMTSEEAEAL--RLVGSTCVARLCMGGGSVMTSLSPKRWHALAWTMMDPSERVRAGFMREVCRGLEQTCGGGAGNSGTSKLRFMAYLCLAAFEAEP-LRSEARLALAKKVRQMRLAHAAXXXXXXXXXXXXXXXXXXXXXXXXXRSGAGAATALEAAMPEGVLPYVIHLLAHHPDFPVDKA--------------SCLRDDKLRMKNLQRYLEFLLGPLV--GQGQEADNLSMLLQTLDTIVTSYQDALEPSSNRIHVTARVARQLLTNRIRTQSNLQPYPGKIFLPVPLF 2376
+PSA L+ KLGWVP V+K Y L+ +V++LLD ++P+ SD ARA G+ +L +DP +++ L IL ++ K ++ A+ H+ + +V + + L P T L L+ D+ VF+ L +C AS + +AR +L+K VGS++ LGE+++TL + ++L++ A + L + E + L +L + + +F K + + A+ L A A+ E E ++K G G + +PD L+ L C S +PAQ A + V LAALS A+ + SA+ + KR PS+ GAAA +L +L F + E + ++A + A +R + + G A+ KG RK A + RC + + + C + +G A S +V LL F LL+++G+ TS + A+ R+V S + RL M SV LS +WH L + + D SE VRA F+R + L + ++ ++++YL LAA E+ L+ AR L V++MR A GA A T+ +PE LPY IHLLAHHPDFP + A S D + L +L F L LV +ADN++ LLQ L + D +PSS + A ++ +IR ++L+P+PG+I+LP LF
Sbjct: 535 VPSA-LAKKLGWVPDMVLKCFAYPQQ-ELKLRVVQLLDDILLPRAASDAARAKGLLYLFRSLDPTSKEALRRILSERAKCLELCRDFVAAKKRHRQLSRGRVGVGPDALPSSDVADAAETLFAGLSPLFPEVPTLRKLLEQLSAWKDQSVFKHLEHLCDYSASVRDIRSAREQLVKCVGSKSPLGEFMKTLCRKLNLLTLNHACVRAYLRFFVQHNARPAKENRDIAELLVLASKLMPAIFAPFIKDEFD---AVLLDADAADAENEGXXXXXXXX--XXIDNKKDQRVIEGMLGVLANYSEYWKKQQLELPDAASLPAADCSAPSKALLKQLEKFCWDPSFGDGSSHASPAQSAAEVHVAKLAALSIANFSGASKDT-------------SALIQKLCAKKRLSSPSSPGAAA--TLQSLLVFTKRCGSELAA-KPSLVATLWATLREQFLDSAGESAETQP----KG---------RKRALTQAKLADIRCLAIRVLVNVVLHCRATSESGEWEAR-----SQQVVELL---FDLLRSDGRT-----WTSNASVAVKYRVVASGSLLRL-MRDASVERLLSVSQWHLLGFVLQDSSEEVRASFLRRLTSHLTK-------HATPHPHKYVSYLVLAASESSAALKKRARSLLGVAVQRMRRVFEASLAR-----------------------GASADTSA-LMVPEYALPYAIHLLAHHPDFPREAAQRSTVTSSSTNSHASLFHDPAWSSQML--HLSFFLDGLVPASASADADNVAFLLQMLAKLAEC-DDVADPSSANAYPLVATAALVVKKKIRNPASLRPFPGRIYLPKQLF 1289
BLAST of mRNA_H-elongata_contig7984.15635.1 vs. uniprot
Match: H3GJE0_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GJE0_PHYRM) HSP 1 Score: 148 bits (373), Expect = 3.730e-32 Identity = 201/831 (24.19%), Postives = 332/831 (39.95%), Query Frame = 1
Query: 13 LPSAELSSKLGWVPSFVVKALGYRDDWGLRAKVLELLDAYIVPKHLSDEARAIGMAHLRHGMDPPARQGLAWILQDKKKVRGEVLRYLDARDAHKASLKNKVSSAXXXXXXXXMRLVTIMALHPTNGTKMTPLHDLNNKVDKKVFRLLRTVCGADASHATVAAARSELLKKVGSRTVLGEYVRTLAYRCSVLSVGAAGFQQLC--LACKKGLEDEDEQSYLPPLGLLETLVGVFPEQ-AKGQHEHLAAMFLAAQ---------ASGIEGEATRVLS----------LIA--AGRWSSDRKGPGADRGAGGCAKRVGGKDAGDEEGIPDEFL-EALVTICAKESNNPAQ----------APIAVRALAALSNADNEEMGEAARFAALDALRQAAASAVAAGVAVGKRSRVPSNHGAAAATSLAALSAFAQEFPKEFQRYEQKVLAFVTARIRGE--GRGADGLEADMAVGSGGKGGXXXXXXXXRKAASGETGAILPRCQTLCFSIELACSCLMPTGAGGGRAARATAASLEVESLLTRVFLLLKAEGQPPGESEMTSEEAEALRLVGSTCVARLCMGGGSVMTSLSPKRWHALAWTMMDPSERVRAGFMREVCRGLEQTCGGGAGNSGTSKLRFMAYLCLAAFEAEP-LRSEARLALAKKVRQMRLAHAAXXXXXXXXXXXXXXXXXXXXXXXXXRSGAGAATALEAAMPEGVLPYVIHLLAHHPDFPVD----KASCLRDDKLRMKNLQRYLEFLLGPLVG-QGQEADNLSMLLQTLDTIVTSYQDALEPSSNRIHVTARVARQLLTNRIRTQSNLQPYPGKIFLPVPLF 2376
+P+A + KLGW+P +V+K Y L+ +V++LLD +++PK LS+ +RA G+ + H MD +++ L + ++ K + ++++ + H+ + + + + + L L+ D VF+ + +C S AR +L++ VGS+T LGE+++ L + S+L++ A L L K G + +S + LL G PE A HE + ++ +A++ S E E VL ++A A WS + DE P L E L C +S+ AQ A +A +A E M R + ++ S + A +L +L A+ F +Q + A + A + + G+G E D G+ G +A G + + C +I++A + L+ R T E E L+ +F +L+++G+ + + AL ++C + +S WH L +TM D SE VR F++++ L + ++++YL LAA ++ ++ AR L + +MR + S +A +PE LPYVIHLLAHHP FPV A + N YL F L LV G ADN++ LLQ L T ++ D L P S I+ A LL +I+ QSNL+P+PGKIFLP L+
Sbjct: 523 IPAAHIK-KLGWIPDYVLKCYAYPQQ-ELKLRVIQLLDDFLLPKALSERSRANGLLFIYHSMDATSKEALRRVFSERSKCQDVCQKFVEFKVQHRHKGRATEADNDGLENAKQQLYAGLSPIFSDVNSLNKLLERLSKWKDHTVFKHIGELCDFSKSQQETRHARDQLVRSVGSKTPLGEFLKKLCRKLSLLTMNQATVATLLEFLILKAGRPSRENRSIVD---LLVMASGELPELFAPFIHEKVTSILVASEDSRRANQSATSDEEDEEEPVLKDPRVVLGALHILANYARHWSIT------------TGREDDASMEDDENATPSPALAEQLHNFCLGDSDVEAQNFNAAKESRAAELAAFTIAHFYGNTEETMELINRLC--------------------SKEKLGSPKSSEALPALQSLEVLAKRCSNIFSA-DQPLFARLWAHLLEDLIGQG----EYDPTPGTPGS---------KERARKGSKQVVAKLAEVRCLAIKVAVNLLVYC--------RPTGPLEEGEKLIKLLFEILRSDGK----TRAPTPALTALFRATASCGLMKMTRNRQLEARISTSEWHLLGFTMQDSSEDVRRKFLKKMTSRLMK-------QPIQHPHKYLSYLALAATDSNTAVKKIARNLLKVAIERMRRMFDSASSRESEAS-----------------SSPSQPSANALMVPEYALPYVIHLLAHHPHFPVKLVEKTAHVMILQSPLWTNQLGYLGFFLDGLVSTNGAAADNIAFLLQIL-TKLSQCHDVLSPESKHIYPLIDSAVVLLKKKIKKQSNLKPFPGKIFLPKHLY 1265
BLAST of mRNA_H-elongata_contig7984.15635.1 vs. uniprot
Match: A0A6A3I6F7_9STRA (Uncharacterized protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A3I6F7_9STRA) HSP 1 Score: 147 bits (370), Expect = 8.410e-32 Identity = 216/834 (25.90%), Postives = 347/834 (41.61%), Query Frame = 1
Query: 13 LPSAELSSKLGWVPSFVVKALGYRDDWGLRAKVLELLDAYIVPKHLSDEARAIGMAHLRHGMDPPARQGLAWILQDKKKVRGEVLRYLDARDAHKASLKNKVSSAXXXXXXXXMRLVT--IMALHPTNGTKMTPLHDLNNKVDKKVFRLLRTVCGADASHATVAAARSELLKKVGSRTVLGEYVRTLAYRCSVLSVGAAGFQQLC--LACKKGLEDEDEQSYLPPLGLLETLVGVFPEQ-AKGQHEHLAAMFLA------AQASGI---EGEATRVL---SLIAAG---------RWSSDRKGPGADRGAGGCAKRVGGKDAG---DEEGIPDEFL-EALVTICAKESNNPAQAPIAVRALAALSNADNEEMGEAARFAALDALRQAAASAVAAGVAVGKRSRVPSNHGAAAATSLAALSAFAQEFPKEFQRYEQ---KVLAFVTARIRGEGRGADGLEADMAVGSGGKGGXXXXXXXXRKAASGETGAILPRCQTLCFSIELACSCLMPTGAGGGRAARATAASLEVESLLTRVFL-LLKAEGQPPGESEMTSEEAEALRLVGSTCVARLCMGGGSVMTSLSPKRWHALAWTMMDPSERVRAGFMREVCRGLEQTCGGGAGNSGTSKLRFMAYLCLAAFEAE-PLRSEARLALAKKVRQMRLAHAAXXXXXXXXXXXXXXXXXXXXXXXXXRSGAGAATALEAAMPEGVLPYVIHLLAHHPDFPVDKA----------SCLRDDKLRMKNLQRYLEFLLGPLVG-QGQEADNLSMLLQTLDTIVTSYQDALEPSSNRIHVTARVARQLLTNRIRTQSNLQPYPGKIFLPVPLF 2376
+P+A + KLGW+P +V+K Y L+ +V++LLD +++PK+LS+ RA G+ + H +D +++ L + ++ K + ++ + H+ K + S A + + + L + L L+ D VF+ + +C S + AR +L++ VGS+T LGE+++ L + S+L++ A L K G + +S + LL G PE A E++A++ + A SG E E VL S+I G WS A G DA DE P L E L C +S+ AQ ++A E A F +A ++ G K ++ S + L +L FA+ F ++ + I GEG E + G+ G ++ G A + + C +I++A + L+ R+AR T+ S + L ++ L +L+++G+ G T A R S + ++ M + S+S WH L +TM D SE VR F++++ L + ++++YL LAA ++ ++ AR L V +MR A +G + +AL +PE LPYVIHLLAHHPDFPV S L D+L YL F L LV ADN++ LLQ L T ++ D P+ I+ A LL +I+ QSNL+P+PGKIFLP L+
Sbjct: 521 IPAAHIK-KLGWIPDYVLKCYAYPQQ-ELKLRVVQLLDDFLLPKNLSERTRANGLLFIFHSLDATSKEALRRVFSERAKCQEICNTFVSFKVQHRR--KGRASEADDNALEEAKQELYDGLAPLFSDVSSLNKLLEKLSKWKDHSVFKHMGELCDFSKSQIDIRHARDQLIRSVGSKTPLGEFLKKLCRKLSLLTMNQASVAVFLDFLIKKDGRPSRENRSLVD---LLVMASGELPELFAPFIRENIASLLVERENAPRANQSGTSDEEDEEEHVLKDPSVILGGLHILANFSLHWS---------------ASTGFGDDASIEEDESSTPSAALMEQLHNFCLGDSDVEAQN---------FNSAKESRAAELAAFIVAHFYGRAGGTSQLIGKLCSKE-KLGSLKASGVMPVLQSLEVFAKLSSHVFSADGSPLSRLWTHLITDIIGEG------ENNPTPGTPGS---------KERSQKGAKSAASKQAEARCLAIKVAVNLLVYC-----RSARGTSDSRADGTKLVKLLLGILRSDGRAYGS---TPTLAAMFRATASCGLIKI-MRDRHLEASMSVAEWHLLGFTMQDSSEDVRHKFLKKLTSHLMK-------QPVQHPHKYLSYLALAATDSSISVKRTARNLLKIAVERMRRMFDAASSRETEMISCTGPV-----------NGTPSMSAL--MVPEYALPYVIHLLAHHPDFPVKLVERTPSVVVLQSALWTDQLA------YLGFFLDGLVSTNATAADNIAFLLQML-TKLSQCHDVTSPNDINIYPLIDSAVALLKKKIKNQSNLKPFPGKIFLPKHLY 1271
BLAST of mRNA_H-elongata_contig7984.15635.1 vs. uniprot
Match: A0A662WJD2_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WJD2_9STRA) HSP 1 Score: 145 bits (366), Expect = 2.600e-31 Identity = 197/818 (24.08%), Postives = 350/818 (42.79%), Query Frame = 1
Query: 13 LPSAELSSKLGWVPSFVVKALGYRDDWGLRAKVLELLDAYIVPKHLSDEARAIGMAHLRHGMDPPARQGLAWILQDKKKVRGEVLRYLDARDAHKASLKNKVSSAXXXXXXXXMRLVT-IMALHPTNGTKMTPLHDLNNKVDKKVFRLLRTVCGADASHATVAAARSELLKKVGSRTVLGEYVRTLAYRCSVLSVGAAGFQQLC--LACKKGLEDEDEQSYLPPLGLLE-TLVGVFPEQAKGQHEHLAAMFLAAQASG-----IEGEATR-------VLSLIA--AGRWSSDRKGPGADRGAGGCAKRVGGKDAGDEEGIPDEFL-EALVTICAKESNNPAQAPIAVRALAALSNADNEEMGEAARFAALDALRQAAASAVAAGVAVGK---RSRVPSNHGAAAATSLAALSAFAQEFPKEFQRYEQKVLAFVTARIRGEGRGADGLEADMAVGSGGKGGXXXXXXXXRKAASGETGAILPRCQTLCFSIELACSCLMPTGAGGGRAARATAASLEVESLLTRVFLLLKAEGQPPGESEMTSEEAEALRLVGSTCVARLCMGGGSVMTSLSPKRWHALAWTMMDPSERVRAGFMREVCRGLEQTCGGGAGNSGTSKLRFMAYLCLAAFEAEP-LRSEARLALAKKVRQMRLAHAAXXXXXXXXXXXXXXXXXXXXXXXXXRSGAGAATALEAAM-PEGVLPYVIHLLAHHPDFPVDKASCLRDDKLRMKNLQ-----RYLEFLLGPLVGQGQEA-DNLSMLLQTLDTIVTSYQDALEPSSNRIHVTARVARQLLTNRIRTQSNLQPYPGKIFLPVPLF 2376
+P+A + KLGW+P +V+K YR L+ +V++LLD +++PK S+ RA G+ + H +D +++ L I ++ K + R++ + + + + + + L P G L L D+ VF+ + +C S + AR +L++ +GS+T LGE+++ L + S+L++ A L ++ ++ +S + L + TL +F K + E A+ + A G EG R L+++A + W ++ DR +K+ DE +P L + L C ES++ Q N ++ + +AA AAL L + + + + ++ S A A+++L +L FA+ + F ++ +L+ + A L D V G RK G+ A++ + C ++++A + L+ + G A + + L+ +F +L+++G + + A ++C M + S+S WH L +TM D SE VR F++++ L + +S ++++YL LAA ++ L+ R L V +MR A S +++ A M PE LPYVIHLLAHHPDFP +K L +++ Y+ F L L+ A DN++ LLQ L T ++ D P + I+ A LL +I+ QSNL+P+PGKI+LP L+
Sbjct: 573 IPAAHIK-KLGWIPDYVLKCFAYRQQ-ELKLRVVQLLDDFLLPKACSERIRANGLMLIYHSLDATSKEALRRIFNERAKCQSVCQRFVSFKIVQRQKARGASQTDDSTLEKAKQQFYDGLSPLFPDVGNLRKLLERLAKWKDQSVFKHMGELCDFSKSQSETRHARDQLVRCIGSKTPLGEFLKKLCRKLSLLTMNQASIAAFLGFLISREARPSKENRSIVDMLVMSSSTLPELFAPFIKEEFE---AILIENDAVGGAEDDEEGPLPRDPKVVIGALNVLANYSSHWKANN-----DRVDDELSKK-------DESAMPSAALTKQLRAFCLGESDDEIQ------------NLNSAKESQAAELAALT-LANFYGTTQETRLLIDNLCSKEKLRSPDAAGASSTLQSLEVFAKRCGQLFST-DKPMLSRLWAS----------LIDDFIVQGVGPASADAPASKERKHKGGKP-AVVKLAEVRCLAVKVAVNLLVYCRSAEGPAVPRESGT----KLIKLLFDILRSDGNTWTANATLAANFRAT----ASCGLMKLMRNRPIEASISVSEWHLLGFTMQDSSEEVRRKFVKKLTAHLMK-------HSVQHPHKYLSYLALAATDSSVGLKKAVRSLLKIAVERMRRVFDAASSRDTDTE----------------NSPDQVGSSVNALMVPEYSLPYVIHLLAHHPDFP-NKLVARTPTALVLQSALWTGQLTYVGFFLDGLISANTAAADNIAFLLQIL-TKLSQCHDVTSPETKHIYPLIDSAVALLKKKIKKQSNLKPFPGKIYLPKHLY 1315
BLAST of mRNA_H-elongata_contig7984.15635.1 vs. uniprot
Match: A0A0P1A5B3_PLAHL (Sister chromatid cohesion complex Cohesin, subunit PDS5 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A5B3_PLAHL) HSP 1 Score: 142 bits (357), Expect = 1.200e-30 Identity = 200/806 (24.81%), Postives = 335/806 (41.56%), Query Frame = 1
Query: 13 LPSAELSSKLGWVPSFVVKALGYRDDWGLRAKVLELLDAYIVPKHLSDEARAIGMAHLRHGMDPPARQGLAWILQDKKKVRGEVLRYLDARDAHKASLKNKVSSAXXXXXXXXMRLVTIMALHPTNGTKMTPLHDLNNKVDKKVFRLLRTVCGADASHATVAAARSELLKKVGSRTVLGEYVRTLAYRCSVLSVG--AAGFQQLCLACKKGLEDEDEQSYLPPLGLLET-LVGVFPEQAKGQHEHLAAMFLAAQASG-IEGEATRV----LSLIA--AGRWSSDRKGPGADRGAGGCAKRVGGKDAGDEEGIPDEFL-EALVTICAKESNNPAQAPIAVRALAALSNADNEEMGEAARFAALDALRQAAASAVAAGVAVGKRSRVPSNHGAAAATSLAALSAFAQEFPKEFQRYEQKVLAFVTARIRGEGRGADGLEADMAVGSGGKGGXXXXXXXXRKAASGETGAILPRCQTLCFSIELACSCLMPTGAGGGRAARATAASLEVESLLTRVFLLLKAEGQPPGESEMTSEEAEALRLVGSTCVARLCMGGGSVMTSLSPKRWHALAWTMMDPSERVRAGFMREVCRGLEQTCGGGAGNSGTSKLRFMAYLCLAAFEAE-PLRSEARLALAKKVRQMRLAHAAXXXXXXXXXXXXXXXXXXXXXXXXXRSGAGAATALEAAM-PEGVLPYVIHLLAHHPDFP---VDKASCLRD-DKLRMKNLQRYLEFLLGPLVGQGQEADNLSMLLQTLDTIVTSYQDALEPSSNRIHVTARVARQLLTNRIRTQSNLQPYPGKIFLPVPLFQ 2379
+PS L KL W+P +V+K Y L+ +V++L+D +++PK ++ R G+ L H +D +++ L + +++ K + +++ + H+ + + L + + P N K+ L L D VF+ L +C S + AR EL++ VGSRT LGE+++ L + ++L+V + G+ LA K G ++ +S + L ++ L +F + Q ++ + + G+ V L ++A A WS+ D D+ IP + L E L C + A RA + A G+A + L++ + + +V S+ +L +L F++ +F V T D ++ GS K ++ A+ +T I RC L + LA +P + S E L+ + +L++ G + +TS + RL S + ++ M + T LS WH L ++ D SE VR F++++ + + +S ++++YL L A E L+ EAR L V +MR A S L A + PE LPYVIHLLAHHP FP V+K S + + YLEF L LV ADN++ LLQ L T ++ Y D + P+ ++ + LL RI+TQS+L+P+PGKIFLP L+Q
Sbjct: 31 IPSEHLK-KLMWIPDYVLKCFAYPQG-ELKLRVIQLVDDFLLPKTFTERTRVNGLLFLFHSLDNVSKEALRRLFRERAKCQDARTKFVTFKIHHRRQKRTDGHALDQAIQNFHHELSPLFSNVP-NLKKV--LEKLGKWKDHSVFKHLGALCDNQKSQNAIRLARDELVRCVGSRTALGEFLKKLCRKLALLTVNHVSIGYLLDFLAGKHGRSMKETRSAVELLVMVSNDLPRLFDPFIRDQVTNILVKNKSRDDNNESNGKDFNVILGALEILANYAQHWSTT-------------------SDIKDDNRIPSKVLIERLQKFCLGDVAQSLNATKTRRAAELAAVALTHFYGKAKPT--IQVLKKLCS-----------KEKVGSSSQGGVLAALQSLVVFSKHCSYQFNENPSLVSHLWTLLFDELINKRDEAFDSISEGSTPK---------SKRLAAAKTTEI--RCLGLKVLVNLAV--YVPHES-----------SQEAAKLMKLLVEILRSNGS---KFAVTSAQTAMFRLTASCGLLKM-MRNPQLETLLSISEWHLLGLSIQDSSEEVRRQFLKKLTSHVVK-------HSVRHPHKYLSYLALVATETTFSLKKEARNILKIAVERMRRMFDAASE----------------------NSNPDQDPNLNAVIVPEYALPYVIHLLAHHPSFPTNLVEKTSSVSILQSAEWSDQLAYLEFFLDGLVSPKSAADNIAFLLQML-TKLSQYHDVIAPNDLAMYPLIDMTAMLLKKRIKTQSDLKPFPGKIFLPKHLYQ 741 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7984.15635.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig7984.15635.1 >prot_H-elongata_contig7984.15635.1 ID=prot_H-elongata_contig7984.15635.1|Name=mRNA_H-elongata_contig7984.15635.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=1255bp VSLCLPSAELSSKLGWVPSFVVKALGYRDDWGLRAKVLELLDAYIVPKHLback to top mRNA from alignment at H-elongata_contig7984:1503..9754+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig7984.15635.1 ID=mRNA_H-elongata_contig7984.15635.1|Name=mRNA_H-elongata_contig7984.15635.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=8252bp|location=Sequence derived from alignment at H-elongata_contig7984:1503..9754+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig7984:1503..9754+ >mRNA_H-elongata_contig7984.15635.1 ID=mRNA_H-elongata_contig7984.15635.1|Name=mRNA_H-elongata_contig7984.15635.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=7530bp|location=Sequence derived from alignment at H-elongata_contig7984:1503..9754+ (Himanthalia elongata Himel1 dioecious)back to top |