prot_H-elongata_contig7909.15567.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig7909.15567.1
Unique Nameprot_H-elongata_contig7909.15567.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length262
Homology
BLAST of mRNA_H-elongata_contig7909.15567.1 vs. uniprot
Match: A0A6H5L4N7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4N7_9PHAE)

HSP 1 Score: 241 bits (615), Expect = 3.940e-76
Identity = 143/237 (60.34%), Postives = 163/237 (68.78%), Query Frame = 0
Query:   29 RPRGVKLKLEVVAACWCGARGGIGKWRQRSLRLDPLLAE-AEAGTEDAGLQGGFVRGKSSPKQQEG---GNAFNDPPKDAEGPLRRFWRRLGVARFFGAGNKMPNLKQLGLYALLSYGFVSNASYGVCVSFAWFATSKKTGLSPLAPGQWQAFLVTYAAFFAINNILRVPRFALAMSLAPAFDRFIAFLMRTTGRGKTFATILCVFVVNILGTLALISTGILLASLLSGVPLWTAAA 261
            R RG    L  VA      R   G  RQ    L  L +E A AG+E+            SPK  E    G A  D  K   GP++R +RR  VARFFGAG KMPN+K+LGLYALLSYGFVSNASY +CV  AWFA+SKKTGLSPLAPGQWQ FLV+YA  +AINN+LRVPRFAL++SLAPAFDRFI FLM+ +GRGK  AT LCV +VNILGT  L+STGILLAS+ SGVP W AAA
Sbjct:   53 RARGQSSDLRRVADTGATPRRWEG--RQGRALLQQLRSEVAAAGSEE------------SPKPSESSTTGGAAVDDGKGEGGPIKRGFRR--VARFFGAGKKMPNVKELGLYALLSYGFVSNASYAICVGLAWFASSKKTGLSPLAPGQWQVFLVSYATLWAINNVLRVPRFALSVSLAPAFDRFIEFLMKKSGRGKGVATGLCVVLVNILGTFVLLSTGILLASIFSGVPFWPAAA 273          
BLAST of mRNA_H-elongata_contig7909.15567.1 vs. uniprot
Match: D7FRK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRK2_ECTSI)

HSP 1 Score: 236 bits (603), Expect = 9.550e-75
Identity = 120/163 (73.62%), Postives = 137/163 (84.05%), Query Frame = 0
Query:   99 DPPKDAEGPLRRFWRRLGVARFFGAGNKMPNLKQLGLYALLSYGFVSNASYGVCVSFAWFATSKKTGLSPLAPGQWQAFLVTYAAFFAINNILRVPRFALAMSLAPAFDRFIAFLMRTTGRGKTFATILCVFVVNILGTLALISTGILLASLLSGVPLWTAAA 261
            D  +   GP++R  RR  VARFFGAG KMPN+K+LGLYALLSYGFVSNASY +CV  AWFA+SKKTGLSPL+PGQWQ FLV+YA  +AINN+LRVPRFAL++SLAPAFDRFI FLM+ TGRGK  AT LCVF+VN LGT AL+STGILLAS+ SGVP W AAA
Sbjct:   82 DDSEGEGGPIKRGLRR--VARFFGAGKKMPNIKELGLYALLSYGFVSNASYAICVGLAWFASSKKTGLSPLSPGQWQVFLVSYATLWAINNVLRVPRFALSVSLAPAFDRFIEFLMKKTGRGKGVATGLCVFLVNFLGTFALLSTGILLASMFSGVPFWPAAA 242          
BLAST of mRNA_H-elongata_contig7909.15567.1 vs. uniprot
Match: A0A835YJB4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJB4_9STRA)

HSP 1 Score: 169 bits (427), Expect = 5.050e-48
Identity = 91/163 (55.83%), Postives = 113/163 (69.33%), Query Frame = 0
Query:   96 AFNDPPKDAEGPLRRFWRRLGVARFF-GAGNKMPNLKQLGLYALLSYGFVSNASYGVCVSFAWFATSKKTGLSPLAPGQWQAFLVTYAAFFAINNILRVPRFALAMSLAPAFDRFIAFLMRTTGRGKTFATILCVFVVNILGTLALISTGILLASLLSGVPLW 257
            A  DP K   GP+ +      V  FF G G     L ++GLYA+LSYGFVSNASY +C+S +W+  SK++GLSPLAPGQWQ FL  Y   F  NNI+R  R AL+++LAPAFDR IAF+M  T R +  AT +CVF VN+LGT AL+S GILLASL SGVP++
Sbjct:  101 AVPDPAK--RGPVGK------VKLFFSGDGKNRQKLAKMGLYAVLSYGFVSNASYAICLSVSWYLASKRSGLSPLAPGQWQFFLSVYGGLFVFNNIIRPARLALSLALAPAFDRLIAFIMAKTKRSRAVATAICVFFVNVLGTTALMSGGILLASLFSGVPVF 255          
BLAST of mRNA_H-elongata_contig7909.15567.1 vs. uniprot
Match: A0A6V1QBW0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QBW0_HETAK)

HSP 1 Score: 137 bits (346), Expect = 6.480e-36
Identity = 66/128 (51.56%), Postives = 91/128 (71.09%), Query Frame = 0
Query:  130 LKQLGLYALLSYGFVSNASYGVCVSFAWFATSKKTGLSPLAPGQWQAFLVTYAAFFAINNILRVPRFALAMSLAPAFDRFIAFLMRTTGRGKTFATILCVFVVNILGTLALISTGILLASLLSGVPLW 257
            L+ LG  ALLSYG+VSN SY +C+S AW+  ++++GLSPLAPGQW  FL  Y  FF + N++R  RFA ++ + P FDR +AF+M+ TG  K  A  + VF+VNI GT  L+ TG+ LASL +GVP++
Sbjct:  120 LRSLGAAALLSYGWVSNTSYMICLSLAWYVHARRSGLSPLAPGQWPQFLAVYGGFFVVQNVIRPLRFAFSVFMTPVFDRMVAFIMKRTGLSKPKAFGVTVFLVNICGTFTLLFTGVTLASLAAGVPIF 247          
BLAST of mRNA_H-elongata_contig7909.15567.1 vs. uniprot
Match: A0A1Z5KKJ3_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KKJ3_FISSO)

HSP 1 Score: 130 bits (326), Expect = 1.050e-33
Identity = 66/128 (51.56%), Postives = 88/128 (68.75%), Query Frame = 0
Query:  130 LKQLGLYALLSYGFVSNASYGVCVSFAWFATSKKTGLSPLAPGQWQAFLVTYAAFFAINNILRVPRFALAMSLAPAFDRFIAFLMRTTGRGKTFATILCVFVVNILGTLALISTGILLASLLSGVPLW 257
            L +LGL A+LSYG+VSN SY V VS AWF  SK+TG SPLAPGQW+ FL  YA FF  NNI+R  R A+A+ ++P FD F+  +      GK  A  + V + N++GT++ +  GI LAS+L+GVP+W
Sbjct:   65 LGKLGLAAVLSYGWVSNMSYCVSVSLAWFIFSKQTGKSPLAPGQWKGFLAVYAGFFVFNNIVRPLRLAVAVGVSPKFDAFVKRVQDKLQVGKPLAVTITVILANVVGTISFMCLGIFLASILAGVPVW 192          
BLAST of mRNA_H-elongata_contig7909.15567.1 vs. uniprot
Match: A0A448YVF5_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YVF5_9STRA)

HSP 1 Score: 130 bits (327), Expect = 4.540e-33
Identity = 66/128 (51.56%), Postives = 89/128 (69.53%), Query Frame = 0
Query:  130 LKQLGLYALLSYGFVSNASYGVCVSFAWFATSKKTGLSPLAPGQWQAFLVTYAAFFAINNILRVPRFALAMSLAPAFDRFIAFLMRTTGRGKTFATILCVFVVNILGTLALISTGILLASLLSGVPLW 257
            L ++GL ALLSYGFVSN SY   VS AWF  SKKTGLSPLAPGQW+ FL  YA F+  NN +R  R A+++ + P FD+ +A + R T   K+ +  + VF+ N+ GT +L+S GI +ASL +GVP++
Sbjct:  134 LAKMGLSALLSYGFVSNISYCFTVSLAWFGFSKKTGLSPLAPGQWKGFLAVYAGFYVFNNFIRPMRLAVSIGVTPYFDKAVAAIQRKTKFSKSVSIGIVVFLANVCGTTSLMSLGIYIASLAAGVPIF 261          
BLAST of mRNA_H-elongata_contig7909.15567.1 vs. uniprot
Match: A0A482SRT9_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SRT9_9ARCH)

HSP 1 Score: 126 bits (316), Expect = 8.970e-33
Identity = 65/127 (51.18%), Postives = 88/127 (69.29%), Query Frame = 0
Query:  130 LKQLGLYALLSYGFVSNASYGVCVSFAWFATSKKTGLSPLAPGQWQAFLVTYAAFFAINNILRVPRFALAMSLAPAFDRFIAFLMRTTGRGKTFATILCVFVVNILGTLALISTGILLASLLSGVPL 256
            L +LGL ALL+YGFVSN SY  C+  AW A  KK  LSPLAPGQW+AFL+ Y   +A NN++R  RF L+++L+PAFDR I F  R T   K  AT L V +VN+ GT++ ++ G+ LA+ ++ +PL
Sbjct:   21 LTKLGLNALLAYGFVSNVSYITCLIIAWVAHGKKYSLSPLAPGQWKAFLLIYTGLWAANNVIRPVRFTLSLALSPAFDRLIDFFRRKTSLTKAQATGLVVVLVNVCGTISYLTFGLFLATRIAKIPL 147          
BLAST of mRNA_H-elongata_contig7909.15567.1 vs. uniprot
Match: A0A6U6GPR6_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6GPR6_9STRA)

HSP 1 Score: 126 bits (316), Expect = 1.610e-31
Identity = 66/128 (51.56%), Postives = 86/128 (67.19%), Query Frame = 0
Query:  130 LKQLGLYALLSYGFVSNASYGVCVSFAWFATSKKTGLSPLAPGQWQAFLVTYAAFFAINNILRVPRFALAMSLAPAFDRFIAFLMRTTGRGKTFATILCVFVVNILGTLALISTGILLASLLSGVPLW 257
            L ++G+ ALLSYGFVSN SY V VS AW+  SKKTGLSPLAPGQW+ FL  YA F+  NN +R  R ALA  +   FD  + F+ R T   ++ +    VF+ N  GTLA +S GI+LAS+ +GVP++
Sbjct:  125 LAKMGMSALLSYGFVSNMSYSVSVSLAWYGFSKKTGLSPLAPGQWKPFLAVYAGFYVFNNFVRPIRVALAAGVTKYFDATVNFIQRKTKFSRSASVGTVVFLANFCGTLAAMSFGIMLASIAAGVPVF 252          
BLAST of mRNA_H-elongata_contig7909.15567.1 vs. uniprot
Match: A0A1E7FWD1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FWD1_9STRA)

HSP 1 Score: 121 bits (304), Expect = 2.300e-31
Identity = 61/113 (53.98%), Postives = 78/113 (69.03%), Query Frame = 0
Query:  130 LKQLGLYALLSYGFVSNASYGVCVSFAWFATSKKTGLSPLAPGQWQAFLVTYAAFFAINNILRVPRFALAMSLAPAFDRFIAFLMRTTGRGKTFATILCVFVVNILGTLALIS 242
            L ++GL ALLSYGFVSN SY V V  AWF  SKKTGLSPLAPGQW  FL  YA F+  NNI+R  R A+++ + P FD+ +A + R TG  KT +  + VF+ NI GT +L++
Sbjct:    4 LAKMGLSALLSYGFVSNMSYCVSVGLAWFGFSKKTGLSPLAPGQWPKFLAVYAGFYVFNNIVRPIRLAISIGVTPYFDKAVATIQRKTGFNKTLSIGIVVFLANICGTTSLMA 116          
BLAST of mRNA_H-elongata_contig7909.15567.1 vs. uniprot
Match: K0S7R0_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S7R0_THAOC)

HSP 1 Score: 123 bits (309), Expect = 2.150e-30
Identity = 67/172 (38.95%), Postives = 99/172 (57.56%), Query Frame = 0
Query:   86 SSPKQQEGGNAFNDPPKDAEGPLRRFWRRLGVARFFGAGNKMPNLKQLGLYALLSYGFVSNASYGVCVSFAWFATSKKTGLSPLAPGQWQAFLVTYAAFFAINNILRVPRFALAMSLAPAFDRFIAFLMRTTGRGKTFATILCVFVVNILGTLALISTGILLASLLSGVPLW 257
            S+P  +    A + PP +    L +           G   +   L +LGL ALLSYGFVSN SY V +S +WF  SK+TGLSPLA GQW+ FL  Y  F+  NNI+R  RF  ++ +A  F++F+ F+ R +   + +A  + VF+ N+ GT A +  G+ +AS  +GVP++
Sbjct:   91 SAPSDEVDAPAVSLPPSEKRSILSKIKSAFSDKNESGLTGR-ERLSKLGLSALLSYGFVSNMSYAVTLSLSWFIHSKRTGLSPLAEGQWKPFLAVYGGFYVFNNIIRPLRFGASVLVAKYFEQFVKFIQRKSHLSRKWAIGVVVFLANVCGTFAAMGLGVFIASTAAGVPIF 261          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7909.15567.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L4N7_9PHAE3.940e-7660.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRK2_ECTSI9.550e-7573.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YJB4_9STRA5.050e-4855.83Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6V1QBW0_HETAK6.480e-3651.56Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A1Z5KKJ3_FISSO1.050e-3351.56Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A448YVF5_9STRA4.540e-3351.56Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A482SRT9_9ARCH8.970e-3351.18Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A6U6GPR6_9STRA1.610e-3151.56Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A1E7FWD1_9STRA2.300e-3153.98Uncharacterized protein (Fragment) n=1 Tax=Fragila... [more]
K0S7R0_THAOC2.150e-3038.95Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34370FAMILY NOT NAMEDcoord: 122..250
NoneNo IPR availablePANTHERPTHR34370:SF1coord: 122..250
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..134
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 172..191
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 161..171
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 223..251
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 135..160
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 192..222
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 252..261
NoneNo IPR availableTMHMMTMhelixcoord: 226..248
NoneNo IPR availableTMHMMTMhelixcoord: 172..191
NoneNo IPR availableTMHMMTMhelixcoord: 135..157

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7909contigH-elongata_contig7909:2022..9040 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7909.15567.1mRNA_H-elongata_contig7909.15567.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig7909 1216..9175 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig7909.15567.1 ID=prot_H-elongata_contig7909.15567.1|Name=mRNA_H-elongata_contig7909.15567.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=262bp
MDTLGATSPSNRRWSAGTCSRSIHSVTGRPRGVKLKLEVVAACWCGARGG
IGKWRQRSLRLDPLLAEAEAGTEDAGLQGGFVRGKSSPKQQEGGNAFNDP
PKDAEGPLRRFWRRLGVARFFGAGNKMPNLKQLGLYALLSYGFVSNASYG
VCVSFAWFATSKKTGLSPLAPGQWQAFLVTYAAFFAINNILRVPRFALAM
SLAPAFDRFIAFLMRTTGRGKTFATILCVFVVNILGTLALISTGILLASL
LSGVPLWTAAA*
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