mRNA_H-elongata_contig78164.15487.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig78164.15487.1 vs. uniprot
Match: D7FNR9_ECTSI (Lactoylglutathione lyase family protein / glyoxalase I family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNR9_ECTSI) HSP 1 Score: 136 bits (343), Expect = 2.030e-39 Identity = 61/68 (89.71%), Postives = 64/68 (94.12%), Query Frame = 1
Query: 1 KIHLMELPNPDPVDGRPEHGGRDRHVAFTIQDLAPLKGRLDEAGVNYTMSKSGRAALFCRDLDGNAFE 204
++HLMELPNPDPVDGRPEHGGRDRHVAF+I DL PLKGRLD AGV YTMSKSGRAALFCRDLDGNAFE
Sbjct: 94 QVHLMELPNPDPVDGRPEHGGRDRHVAFSIADLRPLKGRLDSAGVTYTMSKSGRAALFCRDLDGNAFE 161
BLAST of mRNA_H-elongata_contig78164.15487.1 vs. uniprot
Match: A0A7S3RP39_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3RP39_9SPIT) HSP 1 Score: 120 bits (300), Expect = 6.090e-33 Identity = 54/68 (79.41%), Postives = 59/68 (86.76%), Query Frame = 1
Query: 1 KIHLMELPNPDPVDGRPEHGGRDRHVAFTIQDLAPLKGRLDEAGVNYTMSKSGRAALFCRDLDGNAFE 204
+IH+MELPNPDPVDGRPEHGGRDRH+A TI+DL PLK +L V YTMSKSGRAALFCRDLDGNA E
Sbjct: 89 QIHIMELPNPDPVDGRPEHGGRDRHLALTIKDLEPLKKKLQAEDVVYTMSKSGRAALFCRDLDGNAME 156
BLAST of mRNA_H-elongata_contig78164.15487.1 vs. uniprot
Match: A0A4D9CZQ2_9STRA (VOC domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CZQ2_9STRA) HSP 1 Score: 115 bits (289), Expect = 3.960e-31 Identity = 51/68 (75.00%), Postives = 57/68 (83.82%), Query Frame = 1
Query: 1 KIHLMELPNPDPVDGRPEHGGRDRHVAFTIQDLAPLKGRLDEAGVNYTMSKSGRAALFCRDLDGNAFE 204
+IHLMELPNPDP GRPEHGGRDRHVAFT+ ++ PL RL E GV +TMSKSGR A+FCRDLDGNA E
Sbjct: 91 QIHLMELPNPDPTRGRPEHGGRDRHVAFTVDNIDPLMARLTEEGVPFTMSKSGRRAVFCRDLDGNALE 158
BLAST of mRNA_H-elongata_contig78164.15487.1 vs. uniprot
Match: A0A3M1V198_9GAMM (Glyoxalase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M1V198_9GAMM) HSP 1 Score: 112 bits (280), Expect = 2.240e-30 Identity = 48/69 (69.57%), Postives = 58/69 (84.06%), Query Frame = 1
Query: 1 KIHLMELPNPDPVDGRPEHGGRDRHVAFTIQDLAPLKGRLDEAGVNYTMSKSGRAALFCRDLDGNAFEV 207
++HL+ELPNPDPVDGRP HGGRDRHVAF + DL L+ RL+ G+ YT+S+SGRAALFCRD DGNA E+
Sbjct: 53 QVHLLELPNPDPVDGRPTHGGRDRHVAFAVADLDALRERLEARGIPYTLSRSGRAALFCRDPDGNACEL 121
BLAST of mRNA_H-elongata_contig78164.15487.1 vs. uniprot
Match: A0A0S2TE73_9GAMM (Glyoxalase n=1 Tax=Candidatus Tenderia electrophaga TaxID=1748243 RepID=A0A0S2TE73_9GAMM) HSP 1 Score: 112 bits (280), Expect = 2.580e-30 Identity = 49/68 (72.06%), Postives = 56/68 (82.35%), Query Frame = 1
Query: 1 KIHLMELPNPDPVDGRPEHGGRDRHVAFTIQDLAPLKGRLDEAGVNYTMSKSGRAALFCRDLDGNAFE 204
++HLM++PNPDPV GRPEHGGRDRH+AF + DL L RLD+AG YT SKSGR ALFCRDLDGNA E
Sbjct: 52 QLHLMQVPNPDPVTGRPEHGGRDRHIAFAVADLEALCQRLDDAGAVYTRSKSGRKALFCRDLDGNALE 119
BLAST of mRNA_H-elongata_contig78164.15487.1 vs. uniprot
Match: B8GPS4_THISH (Glyoxalase/bleomycin resistance protein/dioxygenase n=2 Tax=Thioalkalivibrio TaxID=106633 RepID=B8GPS4_THISH) HSP 1 Score: 111 bits (278), Expect = 4.380e-30 Identity = 50/72 (69.44%), Postives = 59/72 (81.94%), Query Frame = 1
Query: 1 KIHLMELPNPDPVDGRPEHGGRDRHVAFTIQDLAPLKGRLDEAGVNYTMSKSGRAALFCRDLDGNAFEVGHA 216
+IHL+ELPNPDPVDGRPEHGGRDRHVAF++ L ++ RL+ AGV YTMS+SGR ALF RD DGNA E+ A
Sbjct: 52 QIHLLELPNPDPVDGRPEHGGRDRHVAFSVSGLEAIRQRLEAAGVAYTMSRSGRPALFVRDPDGNAMELMEA 123
BLAST of mRNA_H-elongata_contig78164.15487.1 vs. uniprot
Match: A0A0B0H9D4_SOVGS (Glyoxalase n=3 Tax=Solemya velum gill symbiont TaxID=2340 RepID=A0A0B0H9D4_SOVGS) HSP 1 Score: 111 bits (277), Expect = 6.210e-30 Identity = 47/69 (68.12%), Postives = 59/69 (85.51%), Query Frame = 1
Query: 1 KIHLMELPNPDPVDGRPEHGGRDRHVAFTIQDLAPLKGRLDEAGVNYTMSKSGRAALFCRDLDGNAFEV 207
+IHL+EL NPDPVD RPEHGGRDRH+A T++DL + ++EAG+NYT+S+SGRAALFCRD DGNA E+
Sbjct: 53 QIHLLELENPDPVDDRPEHGGRDRHLAVTVKDLEAVTAVMEEAGINYTLSRSGRAALFCRDPDGNALEM 121
BLAST of mRNA_H-elongata_contig78164.15487.1 vs. uniprot
Match: A0A353XZM2_9GAMM (Glyoxalase (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A353XZM2_9GAMM) HSP 1 Score: 109 bits (273), Expect = 7.730e-30 Identity = 46/69 (66.67%), Postives = 58/69 (84.06%), Query Frame = 1
Query: 1 KIHLMELPNPDPVDGRPEHGGRDRHVAFTIQDLAPLKGRLDEAGVNYTMSKSGRAALFCRDLDGNAFEV 207
+IHL+ELPNPDP++ RP HGGRDRHVA + DL+ ++ RLDEAG++YTMS+SGR ALFCRD D NA E+
Sbjct: 10 QIHLLELPNPDPLENRPPHGGRDRHVALAVADLSLIRQRLDEAGIDYTMSRSGREALFCRDPDANAIEL 78
BLAST of mRNA_H-elongata_contig78164.15487.1 vs. uniprot
Match: A0A7R9TSR7_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TSR7_9VIRI) HSP 1 Score: 111 bits (277), Expect = 9.290e-30 Identity = 51/67 (76.12%), Postives = 55/67 (82.09%), Query Frame = 1
Query: 4 IHLMELPNPDPVDGRPEHGGRDRHVAFTIQDLAPLKGRLDEAGVNYTMSKSGRAALFCRDLDGNAFE 204
IHLMELPNPDPVDGRP+HGGRDRH AF I D+ PL RL+ GV YTMSKSGRAA+F RD DGNA E
Sbjct: 68 IHLMELPNPDPVDGRPDHGGRDRHAAFGIDDVKPLVERLERHGVPYTMSKSGRAAVFFRDPDGNAME 134
BLAST of mRNA_H-elongata_contig78164.15487.1 vs. uniprot
Match: A0A2A4XI50_9GAMM (Glyoxalase n=1 Tax=Ectothiorhodospiraceae bacterium TaxID=2026737 RepID=A0A2A4XI50_9GAMM) HSP 1 Score: 110 bits (275), Expect = 1.180e-29 Identity = 49/68 (72.06%), Postives = 56/68 (82.35%), Query Frame = 1
Query: 1 KIHLMELPNPDPVDGRPEHGGRDRHVAFTIQDLAPLKGRLDEAGVNYTMSKSGRAALFCRDLDGNAFE 204
+IHL+ELPNPDPV GRPEHGGRDRH AF+++ L L +LD AGV YT+SKSGR ALFCRD DGNA E
Sbjct: 49 QIHLLELPNPDPVTGRPEHGGRDRHAAFSVEALNKLMDKLDNAGVVYTLSKSGRRALFCRDPDGNALE 116 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig78164.15487.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig78164.15487.1 >prot_H-elongata_contig78164.15487.1 ID=prot_H-elongata_contig78164.15487.1|Name=mRNA_H-elongata_contig78164.15487.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=73bp MELPNPDPVDGRPEHGGRDRHVAFTIQDLAPLKGRLDEAGVNYTMSKSGRback to top mRNA from alignment at H-elongata_contig78164:1327..1557- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig78164.15487.1 ID=mRNA_H-elongata_contig78164.15487.1|Name=mRNA_H-elongata_contig78164.15487.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=231bp|location=Sequence derived from alignment at H-elongata_contig78164:1327..1557- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig78164:1327..1557- >mRNA_H-elongata_contig78164.15487.1 ID=mRNA_H-elongata_contig78164.15487.1|Name=mRNA_H-elongata_contig78164.15487.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=438bp|location=Sequence derived from alignment at H-elongata_contig78164:1327..1557- (Himanthalia elongata Himel1 dioecious)back to top |