prot_H-elongata_contig7801.15471.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig7801.15471.1
Unique Nameprot_H-elongata_contig7801.15471.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length194
Homology
BLAST of mRNA_H-elongata_contig7801.15471.1 vs. uniprot
Match: A0A6H5KCV1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCV1_9PHAE)

HSP 1 Score: 132 bits (333), Expect = 2.600e-33
Identity = 79/202 (39.11%), Postives = 120/202 (59.41%), Query Frame = 0
Query:    1 GVGLAVRESIARTLGPDGIMPEHISSRLLKMRVIFKHRAVTSFIVGYALTETAATCH------KSKSWKELRSTVTEVSAIAHLILMMDANARTGGRGEGGGLGDVRDLGPYGRDTLNHNGSQLLACAAEHKLTIVNTFFSMPKRGGNSDEFTYEGPKESHRWCMGYILVRQHDHRLVRNITVHPK--MKSDHRLVSASIRL 194
            GVG+A++E++  ++G +G   E IS RL+K+R+        +F+VGYA TET  T        K   W  L + + EV +  HL+++MDANARTG R +G    D + +G YGRD +N+NG +LL  A++++L++ NT+   PK GG    F     K   ++C+ +IL+RQ D R VRN++V       SDH LV  ++RL
Sbjct:   84 GVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDDNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYSRTPK-GGVQQTFQSSN-KGKEKYCLDFILMRQTDRRFVRNVSVKRVDFKDSDHNLVLTTVRL 281          
BLAST of mRNA_H-elongata_contig7801.15471.1 vs. uniprot
Match: A0A6H5KBZ6_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBZ6_9PHAE)

HSP 1 Score: 130 bits (326), Expect = 5.190e-33
Identity = 79/202 (39.11%), Postives = 118/202 (58.42%), Query Frame = 0
Query:    1 GVGLAVRESIARTLGPDGIMPEHISSRLLKMRVIFKHRAVTSFIVGYALTETAATCH------KSKSWKELRSTVTEVSAIAHLILMMDANARTGGRGEGGGLGDVRDLGPYGRDTLNHNGSQLLACAAEHKLTIVNTFFSMPKRGGNSDEFTYEGPKESHRWCMGYILVRQHDHRLVRNITVHPK--MKSDHRLVSASIRL 194
            GVG+A++E++  ++G +G   E IS RL+K+R+        +F+VGYA TET  T        K   W  L + + EV +  HL+++MDANARTG R   GG  D + LG YGRD +N+NG +L   A++++ ++ NT+F  PK G      +    KE +R  + +IL+RQ D R VRN++V       SDH LV  ++RL
Sbjct:   52 GVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRR--GGCCDAKVLGAYGRDIMNNNGERLFGLASDNQFSLANTYFRTPKGGVQHTFQSSNKGKEKYR--LDFILMRQADRRFVRNVSVKRVDFKDSDHNLVLTTVRL 249          
BLAST of mRNA_H-elongata_contig7801.15471.1 vs. uniprot
Match: A0A6H5KC90_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC90_9PHAE)

HSP 1 Score: 132 bits (332), Expect = 3.070e-32
Identity = 81/201 (40.30%), Postives = 119/201 (59.20%), Query Frame = 0
Query:    1 GVGLAVRESIARTLGPDGIMPEHISSRLLKMRVIFKHRAVTSFIVGYALTETAATCH------KSKSWKELRSTVTEVSAIAHLILMMDANARTGGRGEGGGLGDVRDLGPYGRDTLNHNGSQLLACAAEHKLTIVNTFFSMPKRGGNSDEFTYEGPKESHRWCMGYILVRQHDHRLVRNITVHPK--MKSDHRLVSASIR 193
            GVG+A++E++  ++G  G   E IS RL+K+R+        +F+VGYA TETA          K   W  L + + EV +  HL+++MDANARTG R +G    D + +G YGRD +N+NG +LL  AA+++L+++NT+F  PK G      +    KE HR  + +IL+RQ D RLVRN +V       SDH LV  ++R
Sbjct:   52 GVGIAIKETMWDSVGEGGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETARNTAGGDVNAKDSFWTALDAEIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLAADNRLSLINTYFRTPKGGVQHTFQSSNKGKEKHR--LDFILMRQTDRRLVRNASVKRVDFKDSDHNLVHTTVR 248          
BLAST of mRNA_H-elongata_contig7801.15471.1 vs. uniprot
Match: A0A6H5JQH5_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQH5_9PHAE)

HSP 1 Score: 132 bits (332), Expect = 3.110e-32
Identity = 81/201 (40.30%), Postives = 119/201 (59.20%), Query Frame = 0
Query:    1 GVGLAVRESIARTLGPDGIMPEHISSRLLKMRVIFKHRAVTSFIVGYALTETAATCH------KSKSWKELRSTVTEVSAIAHLILMMDANARTGGRGEGGGLGDVRDLGPYGRDTLNHNGSQLLACAAEHKLTIVNTFFSMPKRGGNSDEFTYEGPKESHRWCMGYILVRQHDHRLVRNITVHPK--MKSDHRLVSASIR 193
            GVG+A++E++  ++G  G   E IS RL+K+R+        +F+VGYA TETA          K   W  L + + EV +  HL+++MDANARTG R +G    D + +G YGRD +N+NG +LL  AA+++L+++NT+F  PK G      +    KE HR  + +IL+RQ D RLVRN +V       SDH LV  ++R
Sbjct:  164 GVGIAIKETMWDSVGEGGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETARNTAGGDVNAKDSFWTALDAEIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLAADNRLSLINTYFRTPKGGVQHTFQSSNKGKEKHR--LDFILMRQTDRRLVRNASVKRVDFKDSDHNLVHTTVR 360          
BLAST of mRNA_H-elongata_contig7801.15471.1 vs. uniprot
Match: A0A6H5L7A7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7A7_9PHAE)

HSP 1 Score: 131 bits (329), Expect = 7.430e-32
Identity = 79/202 (39.11%), Postives = 120/202 (59.41%), Query Frame = 0
Query:    1 GVGLAVRESIARTLGPDGIMPEHISSRLLKMRVIFKHRAVTSFIVGYALTETAATCH------KSKSWKELRSTVTEVSAIAHLILMMDANARTGGRGEGGGLGDVRDLGPYGRDTLNHNGSQLLACAAEHKLTIVNTFFSMPKRGGNSDEFTYEGPKESHRWCMGYILVRQHDHRLVRNITVHPK--MKSDHRLVSASIRL 194
            GVG+A++E++  ++G +G   E IS RL+K+R+        +F+VGYA TET  T        K   W  L + + EV +  HL+++MDANARTG R +G    D + +G YGRD +N+NG +LL  A++++L++ NT+F  PK G      +    KE +R  + +IL+RQ D R VRN++V       SDH LV  ++RL
Sbjct:   52 GVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPKGGVQHTFQSSNKGKEKYR--LDFILMRQTDRRFVRNVSVKRVDFKDSDHNLVLTTVRL 249          
BLAST of mRNA_H-elongata_contig7801.15471.1 vs. uniprot
Match: A0A6H5KSV0_9PHAE (Endo/exonuclease/phosphatase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSV0_9PHAE)

HSP 1 Score: 129 bits (324), Expect = 7.780e-32
Identity = 77/202 (38.12%), Postives = 120/202 (59.41%), Query Frame = 0
Query:    1 GVGLAVRESIARTLGPDGIMPEHISSRLLKMRVIFKHRAVTSFIVGYALTETAATCH------KSKSWKELRSTVTEVSAIAHLILMMDANARTGGRGEGGGLGDVRDLGPYGRDTLNHNGSQLLACAAEHKLTIVNTFFSMPKRGGNSDEFTYEGPKESHRWCMGYILVRQHDHRLVRNITVHPK--MKSDHRLVSASIRL 194
            GVG+A++E++  ++G +G   E IS RL+K+R+        +F++GYA TET  T        K   W  L + + EV +  HL+++MDANARTG R +G    D + +G YGRD +N+NG +LL  A++++L++ NT+F  PK G      +    KE +R  + +IL+RQ D R VR+++V       SDH LV  ++RL
Sbjct:   52 GVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVMGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPKGGAQHTFQSSNTGKEKYR--LDFILMRQTDRRFVRDVSVKRVDFKDSDHNLVLTTVRL 249          
BLAST of mRNA_H-elongata_contig7801.15471.1 vs. uniprot
Match: A0A6H5K3Q1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3Q1_9PHAE)

HSP 1 Score: 130 bits (327), Expect = 7.950e-32
Identity = 78/202 (38.61%), Postives = 120/202 (59.41%), Query Frame = 0
Query:    1 GVGLAVRESIARTLGPDGIMPEHISSRLLKMRVIFKHRAVTSFIVGYALTETAATCH------KSKSWKELRSTVTEVSAIAHLILMMDANARTGGRGEGGGLGDVRDLGPYGRDTLNHNGSQLLACAAEHKLTIVNTFFSMPKRGGNSDEFTYEGPKESHRWCMGYILVRQHDHRLVRNITVHPK--MKSDHRLVSASIRL 194
            GVG+A++E++  ++G +G   E IS RL+K+R+        +F+VGYA TET  T        K   W  L + + EV +  HL+++MDANARTG R +G    D + +G YGRD +N+NG +LL  A++++L++ NT+F  PK G      +    KE +R  + +I +RQ D R VRN++V       SDH+LV  ++RL
Sbjct:  249 GVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFLVGYAPTETVRTTEGCDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRKG--CCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPKGGVQHTFQSSNKGKEKYR--LDFIFMRQADRRFVRNVSVKRVDFKDSDHKLVLTTVRL 446          
BLAST of mRNA_H-elongata_contig7801.15471.1 vs. uniprot
Match: A0A6H5K259_9PHAE (Endo/exonuclease/phosphatase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K259_9PHAE)

HSP 1 Score: 126 bits (317), Expect = 1.430e-31
Identity = 78/202 (38.61%), Postives = 117/202 (57.92%), Query Frame = 0
Query:    1 GVGLAVRESIARTLGPDGIMPEHISSRLLKMRVIFKHRAVTSFIVGYALTETAATCH------KSKSWKELRSTVTEVSAIAHLILMMDANARTGGRGEGGGLGDVRDLGPYGRDTLNHNGSQLLACAAEHKLTIVNTFFSMPKRGGNSDEFTYEGPKESHRWCMGYILVRQHDHRLVRNITVHPK--MKSDHRLVSASIRL 194
            GVG+A++E++  ++G  G   E I+ RL+K+R+        +F+VGYA TET  T        K   W  L   + EV +  HL+++MDANARTG R +G    D + +G YGRD +N+NG +LL  A+ ++L++ NT+F  PK G      +    KE +R  + +IL+RQ D R VRN++V       SDH LV  ++RL
Sbjct:   52 GVGIAIKEAMWESVGEKGRTVECINPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDGEIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLASGNQLSLTNTYFRTPKGGVQHTFQSSNKGKEKYR--LDFILMRQADRRFVRNVSVKRVDFKDSDHNLVLTTVRL 249          
BLAST of mRNA_H-elongata_contig7801.15471.1 vs. uniprot
Match: A0A6H5JVN7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVN7_9PHAE)

HSP 1 Score: 130 bits (326), Expect = 1.890e-31
Identity = 79/202 (39.11%), Postives = 119/202 (58.91%), Query Frame = 0
Query:    1 GVGLAVRESIARTLGPDGIMPEHISSRLLKMRVIFKHRAVTSFIVGYALTETAATCH------KSKSWKELRSTVTEVSAIAHLILMMDANARTGGRGEGGGLGDVRDLGPYGRDTLNHNGSQLLACAAEHKLTIVNTFFSMPKRGGNSDEFTYEGPKESHRWCMGYILVRQHDHRLVRNITVHPK--MKSDHRLVSASIRL 194
            GVG+A++E++  T+G +G   E IS RL+K+R+        +F+VGYA TET           K   W  L + + EV +  HL+++MDANARTG R +G    D + +G YGRD +N+NG +LL  A++++L++ NT+F  PK GG    F     K   ++ + +IL+RQ D R VRN++V       SDH LV  ++RL
Sbjct:  229 GVGIAIKEAMWETVGEEGRKVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRITAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPK-GGVQHTFQCSN-KGKEKYRLDFILMRQTDRRFVRNVSVKRVDFKDSDHNLVLTTVRL 426          
BLAST of mRNA_H-elongata_contig7801.15471.1 vs. uniprot
Match: A0A6H5KV75_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV75_9PHAE)

HSP 1 Score: 127 bits (320), Expect = 2.520e-31
Identity = 77/202 (38.12%), Postives = 118/202 (58.42%), Query Frame = 0
Query:    1 GVGLAVRESIARTLGPDGIMPEHISSRLLKMRVIFKHRAVTSFIVGYALTETAATCH------KSKSWKELRSTVTEVSAIAHLILMMDANARTGGRGEGGGLGDVRDLGPYGRDTLNHNGSQLLACAAEHKLTIVNTFFSMPKRGGNSDEFTYEGPKESHRWCMGYILVRQHDHRLVRNITVHPK--MKSDHRLVSASIRL 194
            GVG+ ++E++  ++G +G   E I  RL+K+R+        +F+VGYA TET  T        K   W  L + + EV +  HL+++MDANARTG R +G    D + +G YGRD +N+NG +LL  A++++L++ NT+F  PK G      +    KE +R  + +IL+RQ D R VRN++V       SDH LV  ++RL
Sbjct:  155 GVGIVIKEAMWESVGEEGRTVECICPRLMKVRLQIGRTCGVAFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPKGGVQHTFQSSNKGKEKYR--LDFILMRQADRRFVRNVSVKRVDFKDSDHNLVLTTVRL 352          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7801.15471.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KCV1_9PHAE2.600e-3339.11Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KBZ6_9PHAE5.190e-3339.11Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5KC90_9PHAE3.070e-3240.30Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JQH5_9PHAE3.110e-3240.30Reverse transcriptase domain-containing protein n=... [more]
A0A6H5L7A7_9PHAE7.430e-3239.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSV0_9PHAE7.780e-3238.12Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5K3Q1_9PHAE7.950e-3238.61Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5K259_9PHAE1.430e-3138.61Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5JVN7_9PHAE1.890e-3139.11Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KV75_9PHAE2.520e-3138.12Endo/exonuclease/phosphatase domain-containing pro... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10coord: 1..194
e-value: 7.9E-14
score: 53.6
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 1..192

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7801contigH-elongata_contig7801:160..741 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7801.15471.1mRNA_H-elongata_contig7801.15471.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig7801 160..741 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig7801.15471.1 ID=prot_H-elongata_contig7801.15471.1|Name=mRNA_H-elongata_contig7801.15471.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=194bp
GVGLAVRESIARTLGPDGIMPEHISSRLLKMRVIFKHRAVTSFIVGYALT
ETAATCHKSKSWKELRSTVTEVSAIAHLILMMDANARTGGRGEGGGLGDV
RDLGPYGRDTLNHNGSQLLACAAEHKLTIVNTFFSMPKRGGNSDEFTYEG
PKESHRWCMGYILVRQHDHRLVRNITVHPKMKSDHRLVSASIRL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036691Endo/exonu/phosph_ase_sf