mRNA_H-elongata_contig77504.15432.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig77504.15432.1 vs. uniprot
Match: A0A6H5KCE2_9PHAE (PKS_ER domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KCE2_9PHAE) HSP 1 Score: 371 bits (952), Expect = 8.030e-127 Identity = 187/219 (85.39%), Postives = 202/219 (92.24%), Query Frame = 1
Query: 1 LLRLEDDDDVSELGPKEVSVKILFAPINPSDINQVEGSYGVLPPLPAVGGNEGVGEITAVGSAVTRLAVGDWAVPMPASGFGTWRTVAKANEAMLQRCPSDIPAEYAATIGVNPCTAYRLLRDFETLREGDTVIQNGANSQVGMAVIQMARSMGVRTINVVRERPPGDDTVELLKSLGGDVVVTPAVIENPEAFSRAVEGLALPRLGLNCTGGSIATSV 657
+LRLE DDDVSELGP+EV+VK+LFAPINPSDINQVEGSYGVLP LPAVGGNEGVGE+TAVGS VTRLAVGDWAVPMPA+GFGTWR V KA+ +MLQ+CPSDIPAEYAATIGVNPCTAYRLLRDFETLREGDTVIQNGANSQVG+AVIQMAR MGVRTINVVRERPPGD+TVELLKSLG DVVVTPAV+ + ++ AV GL PRLGLNC GGSIATSV
Sbjct: 33 VLRLEADDDVSELGPREVAVKMLFAPINPSDINQVEGSYGVLPTLPAVGGNEGVGEVTAVGSDVTRLAVGDWAVPMPAAGFGTWRNVGKADVSMLQKCPSDIPAEYAATIGVNPCTAYRLLRDFETLREGDTVIQNGANSQVGVAVIQMARDMGVRTINVVRERPPGDNTVELLKSLGADVVVTPAVLGVADDYAEAVAGLPPPRLGLNCVGGSIATSV 251
BLAST of mRNA_H-elongata_contig77504.15432.1 vs. uniprot
Match: A0A6S9DR41_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9DR41_HETAK) HSP 1 Score: 234 bits (597), Expect = 7.690e-73 Identity = 119/219 (54.34%), Postives = 154/219 (70.32%), Query Frame = 1
Query: 4 LRLEDDD-DVSELGPKEVSVKILFAPINPSDINQVEGSYGVLPPLPAVGGNEGVGEITAVGSAVTRLAVGDWAVPMPASGFGTWRTVAKANEAMLQRCPSDIPAEYAATIGVNPCTAYRLLRDFETLREGDTVIQNGANSQVGMAVIQMARSMGVRTINVVRERPPGDDTVELLKSLGGDVVVTPAVIENPEAFSRAVEGLALPRLGLNCTGGSIATSV 657
L +E +D +++ LG +++V+++ APINPSD+N VEGSY +LP LPAVGGNEGV ++T VGSAV L+VGDW +P GFGTWR A A + P +PAEYAA + VNPCTA+RLLRDF+ L EGD +IQNGANS VGMAVIQMA++ G+ T+NVVR RP G + ++ LK LGGDVV + N F R + L P+L LNC GG A ++
Sbjct: 49 LAMESEDVNLTSLGATDIAVQMIAAPINPSDLNMVEGSYDILPSLPAVGGNEGVAKVTGVGSAVKDLSVGDWVIPAN-PGFGTWRQAATGAAADFLKVPPSLPAEYAACLSVNPCTAFRLLRDFQELGEGDVIIQNGANSMVGMAVIQMAKARGITTVNVVRNRPQGQEVMQFLKDLGGDVVCFDEYV-NTYRFERLMADLPKPKLALNCVGGPSAANL 265
BLAST of mRNA_H-elongata_contig77504.15432.1 vs. uniprot
Match: A0A7K4K3Y0_9AVES (MECR protein (Fragment) n=1 Tax=Crypturellus soui TaxID=458187 RepID=A0A7K4K3Y0_9AVES) HSP 1 Score: 229 bits (584), Expect = 2.250e-71 Identity = 121/210 (57.62%), Postives = 146/210 (69.52%), Query Frame = 1
Query: 28 VSELGPKEVSVKILFAPINPSDINQVEGSYGVLPPLPAVGGNEGVGEITAVGSAVTRLAVGDWAVPMPASGFGTWRTVAKANEAMLQRCPSDIPAEYAATIGVNPCTAYRLLRDFETLREGDTVIQNGANSQVGMAVIQMARSMGVRTINVVRERPPGDDTVELLKSLGGDVVVTPAVIENPEAFSRAVEGLALPRLGLNCTGGSIATSV 657
++ LG +V VK+L APINP+DIN ++GSY +LP LPAVGGNEGVG + VGS VT + GDW +P A G GTWRT A EA L R PSD+P AAT+GVNPCTAYR+L+DFETLR GD+VIQN ANS VG AVIQ+AR+ G+RTINVVR RP VE L SLG D V+T + P+ + + PRL LNC GG AT +
Sbjct: 19 LAPLGDADVHVKMLAAPINPADINMIQGSYALLPELPAVGGNEGVGRVLGVGSRVTTVTPGDWVIPADA-GLGTWRTEAVFPEASLLRVPSDLPLLCAATLGVNPCTAYRMLQDFETLRPGDSVIQNAANSGVGQAVIQIARASGIRTINVVRARPDLPKLVERLVSLGADHVITEETLRKPD-MKHIFKSIPRPRLALNCVGGKSATEM 226
BLAST of mRNA_H-elongata_contig77504.15432.1 vs. uniprot
Match: A0A7K7WMF7_9AVES (MECR protein (Fragment) n=2 Tax=Nothocercus TaxID=1977170 RepID=A0A7K7WMF7_9AVES) HSP 1 Score: 227 bits (579), Expect = 1.100e-70 Identity = 121/219 (55.25%), Postives = 153/219 (69.86%), Query Frame = 1
Query: 1 LLRLEDDDDVSELGPKEVSVKILFAPINPSDINQVEGSYGVLPPLPAVGGNEGVGEITAVGSAVTRLAVGDWAVPMPASGFGTWRTVAKANEAMLQRCPSDIPAEYAATIGVNPCTAYRLLRDFETLREGDTVIQNGANSQVGMAVIQMARSMGVRTINVVRERPPGDDTVELLKSLGGDVVVTPAVIENPEAFSRAVEGLALPRLGLNCTGGSIATSV 657
L RL+D + ++ LG +V +K+L APINP+DIN ++G+YG+L LPAVGGNEGVG++ VGS VT + GDW +P A G GTWRT A E L R PSD+P AAT+GVNPCTAYR+L DFETLR GD+VIQN ANS VG AVIQ+A++ G+RTINVVR RP VE L SLG D V+T ++ P+ + + + PRL LNC GG AT +
Sbjct: 6 LSRLKDLE-LAPLGDSDVHIKMLAAPINPADINMIQGTYGLLAQLPAVGGNEGVGQVLGVGSRVTSVGAGDWVIPADA-GLGTWRTEAVFPEEALLRVPSDVPVLCAATLGVNPCTAYRMLADFETLRPGDSVIQNAANSGVGQAVIQIAKASGIRTINVVRARPDLPKLVERLVSLGADHVITEEMLRKPD-MNDIFKSIPKPRLALNCVGGKSATEM 221
BLAST of mRNA_H-elongata_contig77504.15432.1 vs. uniprot
Match: A0A7K6WML9_STECA (MECR protein (Fragment) n=2 Tax=Neognathae TaxID=8825 RepID=A0A7K6WML9_STECA) HSP 1 Score: 225 bits (574), Expect = 7.470e-70 Identity = 119/219 (54.34%), Postives = 151/219 (68.95%), Query Frame = 1
Query: 1 LLRLEDDDDVSELGPKEVSVKILFAPINPSDINQVEGSYGVLPPLPAVGGNEGVGEITAVGSAVTRLAVGDWAVPMPASGFGTWRTVAKANEAMLQRCPSDIPAEYAATIGVNPCTAYRLLRDFETLREGDTVIQNGANSQVGMAVIQMARSMGVRTINVVRERPPGDDTVELLKSLGGDVVVTPAVIENPEAFSRAVEGLALPRLGLNCTGGSIATSV 657
L RL+D + V+ELG +V VK+L APINP+DIN ++G+Y +L PLPAVGGNEGVGE+ VG VT L GDW +P ++G GTWRT E ML + PSDIP AAT+ VNPCTAYR+L DFETL GD++IQN ANS VG AVIQ+A++ G++TINVVR+RP VE L +LG D V+T ++ PE + + PRL LNC GG T +
Sbjct: 12 LFRLKDLE-VTELGDSDVHVKMLAAPINPADINMIQGTYAILSPLPAVGGNEGVGEVLEVGRRVTALKPGDWVIP-GSTGLGTWRTQGVFPEEMLLKVPSDIPVLCAATLSVNPCTAYRMLTDFETLAPGDSIIQNAANSGVGQAVIQIAKASGIKTINVVRDRPDFPKLVERLMALGADHVITEEMLRKPE-MKDIFKSIPKPRLALNCVGGKSTTEM 227
BLAST of mRNA_H-elongata_contig77504.15432.1 vs. uniprot
Match: UPI001B353C6F (enoyl-[acyl-carrier-protein] reductase, mitochondrial isoform X1 n=2 Tax=Ochotona curzoniae TaxID=130825 RepID=UPI001B353C6F) HSP 1 Score: 228 bits (580), Expect = 7.790e-70 Identity = 118/217 (54.38%), Postives = 156/217 (71.89%), Query Frame = 1
Query: 7 RLEDDDDVSELGPKEVSVKILFAPINPSDINQVEGSYGVLPPLPAVGGNEGVGEITAVGSAVTRLAVGDWAVPMPASGFGTWRTVAKANEAMLQRCPSDIPAEYAATIGVNPCTAYRLLRDFETLREGDTVIQNGANSQVGMAVIQMARSMGVRTINVVRERPPGDDTVELLKSLGGDVVVTPAVIENPEAFSRAVEGLALPRLGLNCTGGSIATSV 657
R+ + +++ +G +V V++L APINPSDIN ++G+YG+LP LPAVGGNEGVG++ AVGS+VT L GDW +P A G GTWRT A NE + PSDIP + AAT+GVNPCTAYR+LRDFE L+ GD+VIQN +NS VG AVIQ+A ++G+RTINVVR+RP + LKSLG + VVT + PE + + + + PRL LNC GG +T +
Sbjct: 90 RVLKNTELAAMGGSDVRVRMLAAPINPSDINMIQGNYGLLPELPAVGGNEGVGQVLAVGSSVTTLKPGDWVIPASA-GLGTWRTEAVFNEEAVIGIPSDIPLQSAATLGVNPCTAYRMLRDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPNLQELTNRLKSLGAEHVVTEEDLRKPETRA-SFKDMPPPRLALNCVGGKSSTEL 304
BLAST of mRNA_H-elongata_contig77504.15432.1 vs. uniprot
Match: A0A851M2V2_CORCR (MECR protein (Fragment) n=2 Tax=Neognathae TaxID=8825 RepID=A0A851M2V2_CORCR) HSP 1 Score: 222 bits (566), Expect = 9.240e-70 Identity = 118/219 (53.88%), Postives = 150/219 (68.49%), Query Frame = 1
Query: 1 LLRLEDDDDVSELGPKEVSVKILFAPINPSDINQVEGSYGVLPPLPAVGGNEGVGEITAVGSAVTRLAVGDWAVPMPASGFGTWRTVAKANEAMLQRCPSDIPAEYAATIGVNPCTAYRLLRDFETLREGDTVIQNGANSQVGMAVIQMARSMGVRTINVVRERPPGDDTVELLKSLGGDVVVTPAVIENPEAFSRAVEGLALPRLGLNCTGGSIATSV 657
L RL+D + V++LG +V VK+L APINP+DIN ++G+Y +L PLPAVGGNEGVGE+ VG VT L GDW +P ++G GTWRT E L + PSDIP AAT+ VNPCTAYR+L DFETL GD+VIQN ANS VG AVIQ+A++ G++TINVVR+RP VE L +LG D V+T ++ PE + + PRL LNC GG T +
Sbjct: 6 LFRLKDLE-VAQLGDSDVHVKMLAAPINPADINMIQGTYAILSPLPAVGGNEGVGEVLEVGRRVTALRPGDWVIPA-STGLGTWRTQGVFPEETLLKVPSDIPVLCAATLSVNPCTAYRMLADFETLAPGDSVIQNAANSGVGQAVIQIAKASGIKTINVVRDRPDLPKLVERLMALGADHVITEEMLRKPE-MKDIFKSIPKPRLALNCVGGKSTTEM 221
BLAST of mRNA_H-elongata_contig77504.15432.1 vs. uniprot
Match: A0A7K7BBU5_9AVES (MECR protein (Fragment) n=5 Tax=Nothoprocta TaxID=8806 RepID=A0A7K7BBU5_9AVES) HSP 1 Score: 224 bits (571), Expect = 2.120e-69 Identity = 121/219 (55.25%), Postives = 150/219 (68.49%), Query Frame = 1
Query: 1 LLRLEDDDDVSELGPKEVSVKILFAPINPSDINQVEGSYGVLPPLPAVGGNEGVGEITAVGSAVTRLAVGDWAVPMPASGFGTWRTVAKANEAMLQRCPSDIPAEYAATIGVNPCTAYRLLRDFETLREGDTVIQNGANSQVGMAVIQMARSMGVRTINVVRERPPGDDTVELLKSLGGDVVVTPAVIENPEAFSRAVEGLALPRLGLNCTGGSIATSV 657
L RLED + ++ LG +V VK+L APINP+DIN ++G+Y +LP LPAVGGNEGVG + VG VT + GDW +P A G GTWRT A E L R P D+P AAT+GVNPCTAYR+L DFE+LR GD+VIQN ANS VG AVIQ+AR+ G+RTINVVR+RP VE L SLG D V+T ++ P+ + + PRL LNC GG AT +
Sbjct: 12 LSRLEDLE-LAPLGDSDVHVKMLAAPINPADINMIQGTYALLPELPAVGGNEGVGRVLGVGRRVTSVTPGDWVLPADA-GLGTWRTEAVFPEQSLLRVPRDVPVLCAATLGVNPCTAYRMLADFESLRPGDSVIQNAANSGVGQAVIQIARATGIRTINVVRDRPDLPKLVERLVSLGADHVITEEMLRKPD-MKDIFKSIPKPRLALNCVGGKSATEM 227
BLAST of mRNA_H-elongata_contig77504.15432.1 vs. uniprot
Match: UPI0003344570 (trans-2-enoyl-CoA reductase, mitochondrial isoform X1 n=4 Tax=Talpidae TaxID=9373 RepID=UPI0003344570) HSP 1 Score: 225 bits (574), Expect = 2.570e-69 Identity = 113/213 (53.05%), Postives = 153/213 (71.83%), Query Frame = 1
Query: 19 DDDVSELGPKEVSVKILFAPINPSDINQVEGSYGVLPPLPAVGGNEGVGEITAVGSAVTRLAVGDWAVPMPASGFGTWRTVAKANEAMLQRCPSDIPAEYAATIGVNPCTAYRLLRDFETLREGDTVIQNGANSQVGMAVIQMARSMGVRTINVVRERPPGDDTVELLKSLGGDVVVTPAVIENPEAFSRAVEGLALPRLGLNCTGGSIATSV 657
+ +++ +G ++ VK+L APINPSDIN ++G+YG+LPPLPAVGGNEGVG++ AVGS+VT + GDW +P A G GTWRT A +E +L PSDIP + AAT+GVNPCTAYR+L DFE LR GD++IQN +NS VG AVIQ+A ++G+RTINVVR+RP + LK+LG + V+T + E + + + PRL LNC GG +T +
Sbjct: 62 NQELAAVGRSDIHVKMLAAPINPSDINMIQGNYGLLPPLPAVGGNEGVGQVVAVGSSVTAMKPGDWVIPASA-GLGTWRTEAVFSEEVLIGVPSDIPLQSAATLGVNPCTAYRMLMDFEQLRPGDSIIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLTDRLKNLGAEHVITEEELRKHE-MKKFFKDMPQPRLALNCVGGKSSTEL 272
BLAST of mRNA_H-elongata_contig77504.15432.1 vs. uniprot
Match: F7DH27_ORNAN (Mitochondrial trans-2-enoyl-CoA reductase n=2 Tax=Ornithorhynchus anatinus TaxID=9258 RepID=F7DH27_ORNAN) HSP 1 Score: 225 bits (573), Expect = 3.340e-69 Identity = 117/213 (54.93%), Postives = 149/213 (69.95%), Query Frame = 1
Query: 19 DDDVSELGPKEVSVKILFAPINPSDINQVEGSYGVLPPLPAVGGNEGVGEITAVGSAVTRLAVGDWAVPMPASGFGTWRTVAKANEAMLQRCPSDIPAEYAATIGVNPCTAYRLLRDFETLREGDTVIQNGANSQVGMAVIQMARSMGVRTINVVRERPPGDDTVELLKSLGGDVVVTPAVIENPEAFSRAVEGLALPRLGLNCTGGSIATSV 657
D ++ G +EV VK+L AP+NP+DIN V+G+Y +LP LPAVGGNEGVG++ AVG VT L GDW +P A GFGTWRT +E +L + P D+P AAT+GVNPCTAYR+L DFE L+ GDTVIQNGANS VG AVIQ+A + G+RT+NVVR+RP + V+ LK+LG D V+T + NPE + PRL LNC GG +T +
Sbjct: 59 DVELRTPGGREVQVKMLAAPVNPADINMVQGTYALLPALPAVGGNEGVGQVVAVGGDVTSLEPGDWVIPADA-GFGTWRTDVVLSEEVLVKVPRDLPLLCAATLGVNPCTAYRMLMDFEDLQPGDTVIQNGANSGVGQAVIQIAAARGLRTVNVVRDRPNIQELVDRLKALGADHVITEERLRNPE-MKFLFKSTPQPRLALNCIGGKSSTEL 269 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig77504.15432.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig77504.15432.1 >prot_H-elongata_contig77504.15432.1 ID=prot_H-elongata_contig77504.15432.1|Name=mRNA_H-elongata_contig77504.15432.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=221bp LLRLEDDDDVSELGPKEVSVKILFAPINPSDINQVEGSYGVLPPLPAVGGback to top mRNA from alignment at H-elongata_contig77504:371..2853+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig77504.15432.1 ID=mRNA_H-elongata_contig77504.15432.1|Name=mRNA_H-elongata_contig77504.15432.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2483bp|location=Sequence derived from alignment at H-elongata_contig77504:371..2853+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig77504:371..2853+ >mRNA_H-elongata_contig77504.15432.1 ID=mRNA_H-elongata_contig77504.15432.1|Name=mRNA_H-elongata_contig77504.15432.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1326bp|location=Sequence derived from alignment at H-elongata_contig77504:371..2853+ (Himanthalia elongata Himel1 dioecious)back to top |