prot_H-elongata_contig7682.15350.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig7682.15350.1
Unique Nameprot_H-elongata_contig7682.15350.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length140
Homology
BLAST of mRNA_H-elongata_contig7682.15350.1 vs. uniprot
Match: D7FLL5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLL5_ECTSI)

HSP 1 Score: 248 bits (632), Expect = 2.320e-82
Identity = 128/139 (92.09%), Postives = 134/139 (96.40%), Query Frame = 0
Query:    1 IKSGKVVVLLAGRYAGRKAIVVKPLDEGSESRKFGHALVAGIDRYPRKVTKAMSKEKIKKRTKLKPFVKYVNVNHVMPTRYQVDIDLKKVVDESAIKASRVDVRKAVRKILEERYLNQKDVKSEKKATGVKYFFEKLRF 139
            IKSGKVVVLLAGRYAGRKAIVVKP DEGSE+RKFGHA+VAGIDRYPR+VTKAMSK+KIKKRTKLKPFVKYVNVNH+MPTRYQVDIDLKK VDE+AIKAS  DVRKAVRKI EERYLNQKDVKSEKKATGVKYFFEKLRF
Sbjct:   24 IKSGKVVVLLAGRYAGRKAIVVKPFDEGSENRKFGHAIVAGIDRYPRRVTKAMSKDKIKKRTKLKPFVKYVNVNHIMPTRYQVDIDLKKAVDETAIKASPTDVRKAVRKIFEERYLNQKDVKSEKKATGVKYFFEKLRF 162          
BLAST of mRNA_H-elongata_contig7682.15350.1 vs. uniprot
Match: A0A836CBN1_9STRA (60S ribosomal protein L27 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBN1_9STRA)

HSP 1 Score: 202 bits (513), Expect = 1.620e-64
Identity = 104/139 (74.82%), Postives = 119/139 (85.61%), Query Frame = 0
Query:    1 IKSGKVVVLLAGRYAGRKAIVVKPLDEGSESRKFGHALVAGIDRYPRKVTKAMSKEKIKKRTKLKPFVKYVNVNHVMPTRYQVDIDLKKVVDESAIKASRVDVRKAVRKILEERYLNQKDVKSEKKATGVKYFFEKLRF 139
            IK+GKVV++LAGRYAGRKAIVVK  D GS  RKF HALVAGIDRYPRKVTK+MSK K+ KR+K KPFVK+VNVNH+MPTRY  DI+LK VV+ESA KASR +VRKAV+K+ EERYLNQ  +KSEKKA+G KYFF KL F
Sbjct:    4 IKAGKVVIMLAGRYAGRKAIVVKAYDSGSADRKFTHALVAGIDRYPRKVTKSMSKVKVAKRSKCKPFVKFVNVNHLMPTRYTADIELKTVVEESAFKASRPEVRKAVKKVFEERYLNQGQIKSEKKASGSKYFFAKLAF 142          
BLAST of mRNA_H-elongata_contig7682.15350.1 vs. uniprot
Match: A0A0W8DKH9_PHYNI (Platelet-activating factor acetylhydrolase IB subunit alpha n=2 Tax=Peronosporaceae TaxID=4777 RepID=A0A0W8DKH9_PHYNI)

HSP 1 Score: 192 bits (488), Expect = 2.740e-60
Identity = 97/141 (68.79%), Postives = 116/141 (82.27%), Query Frame = 0
Query:    1 IKSGKVVVLLAGRYAGRKAIVVKPLDEGSESRKFGHALVAGIDRYPRKVTKAMSKEKIKKRTKLKPFVKYVNVNHVMPTRYQVDIDLKKVVDESAIK--ASRVDVRKAVRKILEERYLNQKDVKSEKKATGVKYFFEKLRF 139
            +K+GKVVVLL GR+AGRKAIVVK  DEG   RKFGHA+VAGIDRYPRKVT+AM K K+KKR+K+KPFVKYVN NH+MPTRY  DIDLKKV+D+  +    SR++ RK ++K+ EERYLNQ   KSEKKA GV +FF+KLRF
Sbjct:   32 VKNGKVVVLLNGRFAGRKAIVVKTFDEGKGDRKFGHAIVAGIDRYPRKVTRAMGKNKLKKRSKVKPFVKYVNYNHIMPTRYVADIDLKKVLDDEVLANPESRIESRKTIKKVFEERYLNQAACKSEKKAAGVSFFFKKLRF 172          
BLAST of mRNA_H-elongata_contig7682.15350.1 vs. uniprot
Match: M4B173_HYAAE (Uncharacterized protein n=21 Tax=Oomycota TaxID=4762 RepID=M4B173_HYAAE)

HSP 1 Score: 190 bits (482), Expect = 9.080e-60
Identity = 95/141 (67.38%), Postives = 117/141 (82.98%), Query Frame = 0
Query:    1 IKSGKVVVLLAGRYAGRKAIVVKPLDEGSESRKFGHALVAGIDRYPRKVTKAMSKEKIKKRTKLKPFVKYVNVNHVMPTRYQVDIDLKKVVDESAI--KASRVDVRKAVRKILEERYLNQKDVKSEKKATGVKYFFEKLRF 139
            +K+GKVVVLL GR+AGRKAIVVK  DEG   RKFGHA+VAGIDRYPRKVT++MSK K+K+R+K+KPFVKYVN NH+MPTRY  DIDLKKV+D+  +    +R++ RK ++K+ EERYLNQ   KSEKKA GV +FF+KLRF
Sbjct:    4 VKNGKVVVLLNGRFAGRKAIVVKTFDEGRGDRKFGHAIVAGIDRYPRKVTRSMSKAKVKQRSKVKPFVKYVNYNHIMPTRYVADIDLKKVLDDEVLGNPETRIESRKTIKKVFEERYLNQGSCKSEKKAAGVSFFFKKLRF 144          
BLAST of mRNA_H-elongata_contig7682.15350.1 vs. uniprot
Match: A0A812X5C3_SYMMI (60S ribosomal protein L27 (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812X5C3_SYMMI)

HSP 1 Score: 189 bits (481), Expect = 1.100e-59
Identity = 98/140 (70.00%), Postives = 117/140 (83.57%), Query Frame = 0
Query:    1 IKSGKVVVLLAGRYAGRKAIVVKPLDEGSESRKFGHALVAGIDRYPRKVTKAMSKEKIKKRTKLKPFVKYVNVNHVMPTRYQVDIDLKKVVDESAIKA-SRVDVRKAVRKILEERYLNQKDVKSEKKATGVKYFFEKLRF 139
            IKSGKVV+LLAGRYAGRKA+VVK  D+GS+ ++FGHA+VAGIDRYPRKV KAM K KI+KRTK+KPFVK VN NH+MPTRY  D DLKKVVDE A+ + +RVD RK ++K+ EE+Y NQ   KSEKKA G +YFF+KLRF
Sbjct:    1 IKSGKVVILLAGRYAGRKAVVVKTNDDGSDGKRFGHAIVAGIDRYPRKVVKAMGKAKIEKRTKIKPFVKVVNFNHIMPTRYAADFDLKKVVDEKALSSEARVDTRKNLKKVFEEKYRNQSS-KSEKKAGGTQYFFKKLRF 139          
BLAST of mRNA_H-elongata_contig7682.15350.1 vs. uniprot
Match: A0A024GB05_9STRA (Uncharacterized protein n=3 Tax=Albugo TaxID=65356 RepID=A0A024GB05_9STRA)

HSP 1 Score: 191 bits (484), Expect = 1.180e-59
Identity = 98/141 (69.50%), Postives = 117/141 (82.98%), Query Frame = 0
Query:    1 IKSGKVVVLLAGRYAGRKAIVVKPLDEGSESRKFGHALVAGIDRYPRKVTKAMSKEKIKKRTKLKPFVKYVNVNHVMPTRYQVDIDLKKVVDESAIKA--SRVDVRKAVRKILEERYLNQKDVKSEKKATGVKYFFEKLRF 139
            IK+GKVVVLL GR+AGRKAIVVK  DEG   RK+G A+VAGIDRYPRKVT++M K KIKK++K+KPFVKYVN NH+MPTRY VDIDLKKV+D+  +    SRV+ RK ++K+ EERYLNQ D  SEKKATGV +FF+KLRF
Sbjct:   34 IKNGKVVVLLNGRFAGRKAIVVKAFDEGVGDRKYGFAIVAGIDRYPRKVTRSMGKNKIKKKSKIKPFVKYVNYNHMMPTRYIVDIDLKKVLDDDVMSKPESRVETRKTIKKVFEERYLNQADCSSEKKATGVSFFFKKLRF 174          
BLAST of mRNA_H-elongata_contig7682.15350.1 vs. uniprot
Match: A0A2D4BF17_PYTIN (60S ribosomal protein L27 n=3 Tax=Eukaryota TaxID=2759 RepID=A0A2D4BF17_PYTIN)

HSP 1 Score: 189 bits (479), Expect = 2.600e-59
Identity = 94/141 (66.67%), Postives = 119/141 (84.40%), Query Frame = 0
Query:    1 IKSGKVVVLLAGRYAGRKAIVVKPLDEGSESRKFGHALVAGIDRYPRKVTKAMSKEKIKKRTKLKPFVKYVNVNHVMPTRYQVDIDLKKVVDESAIK--ASRVDVRKAVRKILEERYLNQKDVKSEKKATGVKYFFEKLRF 139
            +K+GKVV++L GR+AGRKA+VVK  DEG   RKFGHA+VAGIDRYPRKVT+AMSK K+KK++K+KPF+K VN++HVMPTRY VDIDLKKV+D+  +    SR++ RK ++K+ EERYLNQ  VKSEKKA GV +FF+KLRF
Sbjct:    4 VKNGKVVIMLNGRFAGRKAVVVKTHDEGHGDRKFGHAIVAGIDRYPRKVTRAMSKTKLKKKSKVKPFIKVVNLSHVMPTRYVVDIDLKKVLDDEVLANPESRIESRKTIKKVFEERYLNQSAVKSEKKAAGVSFFFKKLRF 144          
BLAST of mRNA_H-elongata_contig7682.15350.1 vs. uniprot
Match: A0A397BII5_9STRA (Uncharacterized protein n=7 Tax=Saprolegniaceae TaxID=4764 RepID=A0A397BII5_9STRA)

HSP 1 Score: 186 bits (473), Expect = 3.130e-58
Identity = 92/141 (65.25%), Postives = 116/141 (82.27%), Query Frame = 0
Query:    1 IKSGKVVVLLAGRYAGRKAIVVKPLDEGSESRKFGHALVAGIDRYPRKVTKAMSKEKIKKRTKLKPFVKYVNVNHVMPTRYQVDIDLKKVVDESAIKA--SRVDVRKAVRKILEERYLNQKDVKSEKKATGVKYFFEKLRF 139
            +K+GKVVVLL GRYAGRKAIVVK  DEG   RKFGHA+VAGIDRYPRK+T++M K+K+ KR+K+KPFVKYVN NH++PTRY  DI+LKKVVD+  +    +R++ RK ++K+ E+RYLNQ   KSEKKA GV +FF+KLRF
Sbjct:   16 VKNGKVVVLLNGRYAGRKAIVVKTYDEGHGDRKFGHAIVAGIDRYPRKITRSMGKKKVTKRSKIKPFVKYVNYNHILPTRYVADIELKKVVDDEVLATPEARIESRKIIKKVFEDRYLNQGATKSEKKAAGVSFFFKKLRF 156          
BLAST of mRNA_H-elongata_contig7682.15350.1 vs. uniprot
Match: A0A1V9Z0C3_9STRA (60S ribosomal protein L27 n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9Z0C3_9STRA)

HSP 1 Score: 186 bits (471), Expect = 5.210e-58
Identity = 92/141 (65.25%), Postives = 116/141 (82.27%), Query Frame = 0
Query:    1 IKSGKVVVLLAGRYAGRKAIVVKPLDEGSESRKFGHALVAGIDRYPRKVTKAMSKEKIKKRTKLKPFVKYVNVNHVMPTRYQVDIDLKKVVDESAIKAS--RVDVRKAVRKILEERYLNQKDVKSEKKATGVKYFFEKLRF 139
            +K+GKVVV+L GRYAGRKAIVVK  DEG+  RKFGHA+VAGIDRYPRK+T++M K+K+ KR+K+KPFVK +N NH+MPTRY  DIDLKKV+DE  +  +  RV+ RK ++K+ E+RYLNQ   KSEKKA GV +FF+KLRF
Sbjct:   10 VKNGKVVVVLNGRYAGRKAIVVKAYDEGNGDRKFGHAIVAGIDRYPRKITRSMGKKKVAKRSKIKPFVKAINYNHIMPTRYVADIDLKKVLDEEVLSKAEARVESRKTIKKVFEDRYLNQAACKSEKKAAGVSFFFKKLRF 150          
BLAST of mRNA_H-elongata_contig7682.15350.1 vs. uniprot
Match: A0A6U1L5V7_9STRA (60S ribosomal protein L27 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6U1L5V7_9STRA)

HSP 1 Score: 184 bits (467), Expect = 1.640e-57
Identity = 89/139 (64.03%), Postives = 113/139 (81.29%), Query Frame = 0
Query:    1 IKSGKVVVLLAGRYAGRKAIVVKPLDEGSESRKFGHALVAGIDRYPRKVTKAMSKEKIKKRTKLKPFVKYVNVNHVMPTRYQVDIDLKKVVDESAIKASRVDVRKAVRKILEERYLNQKDVKSEKKATGVKYFFEKLRF 139
            IKSGKVV++L GR+AGRKAIVVK  D+G+  R+F HA+VAGIDR PRKVT++MSKEKI+KRTK+KPF+KYVN  H+MPTRY VD+DLKK+VDES +K  + + RKA++K+ EERY  Q   K EKKA G  YF++K+ F
Sbjct:    4 IKSGKVVIVLQGRFAGRKAIVVKAYDDGNAERRFAHAMVAGIDRAPRKVTRSMSKEKIQKRTKMKPFLKYVNYTHLMPTRYVVDLDLKKIVDESGLKEGKAEARKAIKKVFEERYHQQSSAKXEKKAAGTMYFYKKMAF 142          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7682.15350.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLL5_ECTSI2.320e-8292.09Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CBN1_9STRA1.620e-6474.8260S ribosomal protein L27 n=1 Tax=Tribonema minus ... [more]
A0A0W8DKH9_PHYNI2.740e-6068.79Platelet-activating factor acetylhydrolase IB subu... [more]
M4B173_HYAAE9.080e-6067.38Uncharacterized protein n=21 Tax=Oomycota TaxID=47... [more]
A0A812X5C3_SYMMI1.100e-5970.0060S ribosomal protein L27 (Fragment) n=1 Tax=Symbi... [more]
A0A024GB05_9STRA1.180e-5969.50Uncharacterized protein n=3 Tax=Albugo TaxID=65356... [more]
A0A2D4BF17_PYTIN2.600e-5966.6760S ribosomal protein L27 n=3 Tax=Eukaryota TaxID=... [more]
A0A397BII5_9STRA3.130e-5865.25Uncharacterized protein n=7 Tax=Saprolegniaceae Ta... [more]
A0A1V9Z0C3_9STRA5.210e-5865.2560S ribosomal protein L27 n=3 Tax=Saprolegniaceae ... [more]
A0A6U1L5V7_9STRA1.640e-5764.0360S ribosomal protein L27 n=1 Tax=Pelagomonas calc... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038655Ribosomal protein L27e superfamilyGENE3D2.30.30.770coord: 1..139
e-value: 1.1E-54
score: 186.3
IPR001141Ribosomal protein L27ePFAMPF01777Ribosomal_L27ecoord: 48..139
e-value: 1.4E-28
score: 99.0
IPR001141Ribosomal protein L27ePANTHERPTHR1049760S RIBOSOMAL PROTEIN L27coord: 2..139
NoneNo IPR availablePANTHERPTHR10497:SF060S RIBOSOMAL PROTEIN L27coord: 2..139
NoneNo IPR availablePRODOMPD009396coord: 53..139
e-value: 6.0E-15
score: 192.0
IPR008991Translation protein SH3-like domain superfamilySUPERFAMILY50104Translation proteins SH3-like domaincoord: 1..97

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7682contigH-elongata_contig7682:4983..6889 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7682.15350.1mRNA_H-elongata_contig7682.15350.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig7682 4983..6889 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig7682.15350.1 ID=prot_H-elongata_contig7682.15350.1|Name=mRNA_H-elongata_contig7682.15350.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=140bp
IKSGKVVVLLAGRYAGRKAIVVKPLDEGSESRKFGHALVAGIDRYPRKVT
KAMSKEKIKKRTKLKPFVKYVNVNHVMPTRYQVDIDLKKVVDESAIKASR
VDVRKAVRKILEERYLNQKDVKSEKKATGVKYFFEKLRF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038655L27e_sf
IPR001141Ribosomal_L27e
IPR008991Translation_prot_SH3-like_sf