prot_H-elongata_contig76120.15293.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig76120.15293.1
Unique Nameprot_H-elongata_contig76120.15293.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length86
Homology
BLAST of mRNA_H-elongata_contig76120.15293.1 vs. uniprot
Match: D7FTP0_ECTSI (Similar to E1a binding protein P400 (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTP0_ECTSI)

HSP 1 Score: 179 bits (453), Expect = 2.490e-50
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0
Query:    1 RFNLDPKLFCFILSTRSGGLGINLTGADTVIFYDSDWNPAMDAQAQDRAHRIGQTREVHIYRLVTSSSIEENILKKAQQKRHLDFL 86
            RFNLDPKLFCFILSTRSGGLGINLTGADTVIFYDSDWNPAMDAQAQDRAHRIGQTREVHIYRLVTSSSIEENILKKAQQKRHLDFL
Sbjct: 1754 RFNLDPKLFCFILSTRSGGLGINLTGADTVIFYDSDWNPAMDAQAQDRAHRIGQTREVHIYRLVTSSSIEENILKKAQQKRHLDFL 1839          
BLAST of mRNA_H-elongata_contig76120.15293.1 vs. uniprot
Match: A0A6H5KKD6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKD6_9PHAE)

HSP 1 Score: 179 bits (453), Expect = 2.500e-50
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0
Query:    1 RFNLDPKLFCFILSTRSGGLGINLTGADTVIFYDSDWNPAMDAQAQDRAHRIGQTREVHIYRLVTSSSIEENILKKAQQKRHLDFL 86
            RFNLDPKLFCFILSTRSGGLGINLTGADTVIFYDSDWNPAMDAQAQDRAHRIGQTREVHIYRLVTSSSIEENILKKAQQKRHLDFL
Sbjct: 2076 RFNLDPKLFCFILSTRSGGLGINLTGADTVIFYDSDWNPAMDAQAQDRAHRIGQTREVHIYRLVTSSSIEENILKKAQQKRHLDFL 2161          
BLAST of mRNA_H-elongata_contig76120.15293.1 vs. uniprot
Match: B8LC33_THAPS (Predicted protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LC33_THAPS)

HSP 1 Score: 160 bits (404), Expect = 2.010e-49
Identity = 75/85 (88.24%), Postives = 80/85 (94.12%), Query Frame = 0
Query:    1 RFNLDPKLFCFILSTRSGGLGINLTGADTVIFYDSDWNPAMDAQAQDRAHRIGQTREVHIYRLVTSSSIEENILKKAQQKRHLDF 85
            RFN D K+FCFILSTRSGGLGINLTGADTV+FYDSDWNPAMDAQAQDRAHRIGQTREVHIYR+VT  SIEENIL KA+QKR+LDF
Sbjct:   17 RFNTDTKVFCFILSTRSGGLGINLTGADTVVFYDSDWNPAMDAQAQDRAHRIGQTREVHIYRMVTEHSIEENILTKAKQKRNLDF 101          
BLAST of mRNA_H-elongata_contig76120.15293.1 vs. uniprot
Match: A0A7S1U7E9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U7E9_9STRA)

HSP 1 Score: 162 bits (409), Expect = 6.760e-48
Identity = 77/86 (89.53%), Postives = 82/86 (95.35%), Query Frame = 0
Query:    1 RFNLDPKLFCFILSTRSGGLGINLTGADTVIFYDSDWNPAMDAQAQDRAHRIGQTREVHIYRLVTSSSIEENILKKAQQKRHLDFL 86
            RFN D KLFCFILSTRSGGLGINLTGADTVIFYDSDWNPAMDAQAQDRAHRIGQTREVHIYRLV+ S+IEENIL+KA+QK+ LDFL
Sbjct:  105 RFNSDEKLFCFILSTRSGGLGINLTGADTVIFYDSDWNPAMDAQAQDRAHRIGQTREVHIYRLVSQSTIEENILRKAKQKQQLDFL 190          
BLAST of mRNA_H-elongata_contig76120.15293.1 vs. uniprot
Match: B7FYZ5_PHATC (Predicted protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FYZ5_PHATC)

HSP 1 Score: 155 bits (392), Expect = 2.960e-47
Identity = 74/83 (89.16%), Postives = 78/83 (93.98%), Query Frame = 0
Query:    1 RFNLDPKLFCFILSTRSGGLGINLTGADTVIFYDSDWNPAMDAQAQDRAHRIGQTREVHIYRLVTSSSIEENILKKAQQKRHL 83
            RFN DPKLFCFILSTRSGGLGINLTGAD+VIFYDSDWNPAMDAQAQDRAHRIGQTR+VHIYR VT  +IEENIL KAQQKR+L
Sbjct:   44 RFNNDPKLFCFILSTRSGGLGINLTGADSVIFYDSDWNPAMDAQAQDRAHRIGQTRDVHIYRFVTEHTIEENILVKAQQKRNL 126          
BLAST of mRNA_H-elongata_contig76120.15293.1 vs. uniprot
Match: A0A835ZAC2_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAC2_9STRA)

HSP 1 Score: 161 bits (408), Expect = 4.230e-47
Identity = 75/86 (87.21%), Postives = 82/86 (95.35%), Query Frame = 0
Query:    1 RFNLDPKLFCFILSTRSGGLGINLTGADTVIFYDSDWNPAMDAQAQDRAHRIGQTREVHIYRLVTSSSIEENILKKAQQKRHLDFL 86
            RFN D +LFCFILSTRSGGLGINLTGADTVIF+DSDWNPAMD+QAQDRAHRIGQTR+VHIYRLVT +++EENILKKAQQKRHLD L
Sbjct:  121 RFNTDDRLFCFILSTRSGGLGINLTGADTVIFFDSDWNPAMDSQAQDRAHRIGQTRDVHIYRLVTRATVEENILKKAQQKRHLDHL 206          
BLAST of mRNA_H-elongata_contig76120.15293.1 vs. uniprot
Match: A0A7S3UX30_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UX30_HETAK)

HSP 1 Score: 157 bits (397), Expect = 5.750e-47
Identity = 73/86 (84.88%), Postives = 80/86 (93.02%), Query Frame = 0
Query:    1 RFNLDPKLFCFILSTRSGGLGINLTGADTVIFYDSDWNPAMDAQAQDRAHRIGQTREVHIYRLVTSSSIEENILKKAQQKRHLDFL 86
            RFN D ++FCFILSTRSGGLGINLTGADTV+FYDSDWNPAMDAQAQDRAHRIGQTR+VHIYRLV  S++EENIL+KAQQKR LD L
Sbjct:  101 RFNADTRVFCFILSTRSGGLGINLTGADTVVFYDSDWNPAMDAQAQDRAHRIGQTRDVHIYRLVCRSTVEENILRKAQQKRRLDHL 186          
BLAST of mRNA_H-elongata_contig76120.15293.1 vs. uniprot
Match: A0A813C9Q4_9DINO (Dom protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813C9Q4_9DINO)

HSP 1 Score: 155 bits (393), Expect = 1.450e-46
Identity = 73/82 (89.02%), Postives = 78/82 (95.12%), Query Frame = 0
Query:    2 FNLDPKLFCFILSTRSGGLGINLTGADTVIFYDSDWNPAMDAQAQDRAHRIGQTREVHIYRLVTSSSIEENILKKAQQKRHL 83
            FN D ++FCFILSTRSGGLGINLTGADTVIFYDSDWNPAMDAQAQDRAHRIGQTR+VHIYRLVT S++EENIL KAQQKRHL
Sbjct:   38 FNNDTRIFCFILSTRSGGLGINLTGADTVIFYDSDWNPAMDAQAQDRAHRIGQTRDVHIYRLVTESTVEENILLKAQQKRHL 119          
BLAST of mRNA_H-elongata_contig76120.15293.1 vs. uniprot
Match: A0A7S2UQV7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UQV7_9STRA)

HSP 1 Score: 162 bits (410), Expect = 2.230e-46
Identity = 77/86 (89.53%), Postives = 81/86 (94.19%), Query Frame = 0
Query:    1 RFNLDPKLFCFILSTRSGGLGINLTGADTVIFYDSDWNPAMDAQAQDRAHRIGQTREVHIYRLVTSSSIEENILKKAQQKRHLDFL 86
            RFN D K+FCFILSTRSGGLGINLTGADTV+FYDSDWNPAMDAQAQDRAHRIGQTR+VHIYRLVT  SIEENIL KA+QKRHLDFL
Sbjct:  102 RFNNDDKVFCFILSTRSGGLGINLTGADTVVFYDSDWNPAMDAQAQDRAHRIGQTRDVHIYRLVTEHSIEENILIKAKQKRHLDFL 187          
BLAST of mRNA_H-elongata_contig76120.15293.1 vs. uniprot
Match: A0A7S1US36_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1US36_9STRA)

HSP 1 Score: 158 bits (399), Expect = 7.420e-46
Identity = 74/86 (86.05%), Postives = 80/86 (93.02%), Query Frame = 0
Query:    1 RFNLDPKLFCFILSTRSGGLGINLTGADTVIFYDSDWNPAMDAQAQDRAHRIGQTREVHIYRLVTSSSIEENILKKAQQKRHLDFL 86
            RFN+D K+FCFILSTRSGGLGINLTGADTVIFYDSDWNPAMDAQAQDRAHRIGQTR+VHIYRL+T  SIEENI  KAQQKR+LD +
Sbjct:   50 RFNMDEKIFCFILSTRSGGLGINLTGADTVIFYDSDWNPAMDAQAQDRAHRIGQTRDVHIYRLITEHSIEENIWTKAQQKRNLDAI 135          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig76120.15293.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTP0_ECTSI2.490e-50100.00Similar to E1a binding protein P400 (Partial) (Fra... [more]
A0A6H5KKD6_9PHAE2.500e-50100.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
B8LC33_THAPS2.010e-4988.24Predicted protein (Fragment) n=1 Tax=Thalassiosira... [more]
A0A7S1U7E9_9STRA6.760e-4889.53Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
B7FYZ5_PHATC2.960e-4789.16Predicted protein (Fragment) n=2 Tax=Phaeodactylum... [more]
A0A835ZAC2_9STRA4.230e-4787.21P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S3UX30_HETAK5.750e-4784.88Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A813C9Q4_9DINO1.450e-4689.02Dom protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230... [more]
A0A7S2UQV7_9STRA2.230e-4689.53Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A7S1US36_9STRA7.420e-4686.05Hypothetical protein (Fragment) n=1 Tax=Grammatoph... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 2..53
e-value: 7.8E-10
score: 39.1
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 1..86
score: 12.132
NoneNo IPR availableGENE3D3.40.50.300coord: 1..86
e-value: 7.5E-45
score: 155.2
NoneNo IPR availablePANTHERPTHR45685:SF1HELICASE SRCAPcoord: 1..85
NoneNo IPR availablePANTHERPTHR45685FAMILY NOT NAMEDcoord: 1..85
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..83

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig76120contigH-elongata_contig76120:781..2694 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig76120.15293.1mRNA_H-elongata_contig76120.15293.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig76120 781..2694 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig76120.15293.1 ID=prot_H-elongata_contig76120.15293.1|Name=mRNA_H-elongata_contig76120.15293.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=86bp
RFNLDPKLFCFILSTRSGGLGINLTGADTVIFYDSDWNPAMDAQAQDRAH
RIGQTREVHIYRLVTSSSIEENILKKAQQKRHLDFL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR027417P-loop_NTPase