mRNA_H-elongata_contig75145.15194.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig75145.15194.1
Unique NamemRNA_H-elongata_contig75145.15194.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig75145.15194.1 vs. uniprot
Match: D7G4V6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4V6_ECTSI)

HSP 1 Score: 260 bits (664), Expect = 1.480e-84
Identity = 129/197 (65.48%), Postives = 161/197 (81.73%), Query Frame = 1
Query:    1 GLQYLLIFGALLLSAIIIYGALYCVVMPQRLHDRPIYFDYSSRATTGGATATVDFQAQHTQWDLALLPIPIVERPRKKLLRPGQHYEVGLELLMPTSYVNRKVGVFMVHTTLMDDQDSVLATSARPAMLPHTSSLLKGLTMLFAWPLYLLGLKKEAETISVSCIDFYKASHLHCASRHRHPLSKVKVTVSSGRVQLY 591
            GLQYLL+F A+LLSA+++YGALY +VMP RLHD+PI+ DYS RATTG AT TVDF A+HTQWD +  P+  VER   K+L+ GQHY+VGLEL MPTSY+NR++GVFMVHTTL+D+QD+ LA+SARPAMLPHTS+L KG+ M+FAWPL+L GL++E ETI V CID+Y+ + LH       PL+K +VTVSSGRVQ Y
Sbjct:   15 GLQYLLLFEAVLLSAVVLYGALYWLVMPLRLHDKPIFLDYSDRATTGSATGTVDFLARHTQWDPS--PLTNVERLNTKVLKAGQHYKVGLELQMPTSYINRRIGVFMVHTTLLDEQDNELASSARPAMLPHTSALRKGVGMMFAWPLHLAGLRREEETIYVDCIDYYEENALH-------PLTKARVTVSSGRVQFY 202          
BLAST of mRNA_H-elongata_contig75145.15194.1 vs. uniprot
Match: A0A6H5JEL4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEL4_9PHAE)

HSP 1 Score: 262 bits (670), Expect = 6.670e-81
Identity = 132/197 (67.01%), Postives = 161/197 (81.73%), Query Frame = 1
Query:    1 GLQYLLIFGALLLSAIIIYGALYCVVMPQRLHDRPIYFDYSSRATTGGATATVDFQAQHTQWDLALLPIPIVERPRKKLLRPGQHYEVGLELLMPTSYVNRKVGVFMVHTTLMDDQDSVLATSARPAMLPHTSSLLKGLTMLFAWPLYLLGLKKEAETISVSCIDFYKASHLHCASRHRHPLSKVKVTVSSGRVQLY 591
            GLQYLL+F A+LLSA+I+YGALY +VMP RLHD+PI+ DYS RATTGGAT TVDF A+HTQWD +  P+  VER   K+L  GQHY+VGLEL MPTSY+NR+VGVFMVHTTL+D+QD+ LA+SARPAMLPHTS+L KG+ M+FAWPL+L GL++E ETI V CID+Y+ + LH       PL+K +VTVSSGRVQ Y
Sbjct:   95 GLQYLLLFEAVLLSAVILYGALYWLVMPLRLHDKPIFLDYSDRATTGGATGTVDFLARHTQWDPS--PLTNVERLNTKVLNAGQHYKVGLELQMPTSYINRRVGVFMVHTTLLDEQDNELASSARPAMLPHTSALRKGVGMMFAWPLHLAGLRREEETIYVDCIDYYEENALH-------PLTKARVTVSSGRVQFY 282          
BLAST of mRNA_H-elongata_contig75145.15194.1 vs. uniprot
Match: A0A8K1C7V7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C7V7_PYTOL)

HSP 1 Score: 107 bits (267), Expect = 3.930e-24
Identity = 69/207 (33.33%), Postives = 115/207 (55.56%), Query Frame = 1
Query:    7 QYLLIFGALLLSAIIIYGALYCVVMPQRLHDRPIYFDYSSRATTGGA-----------TATVDFQAQHTQWDLALLPIPIVERPRKKLLRPGQHYEVGLELLMPTSYVNRKVGVFMVHTTLMDDQDSVLATSARPAMLPHTSSLLKGLTMLFAWPL-YLLGLKKEAETISVSCIDFYKASHLHCASRHRHPLSKVKVTVSSGRVQLY 591
            Q LL F  LL++A I+Y  LY +++P RLH++ I+FDY   A    +           TA ++    H QW+ +  P+  +E    ++L PG  Y+V +EL MP S VNR +G+FM+ TTL       LA+SAR A++  + SL++ L  +F+W + Y L + + ++T+ V  ++ +K          +HPL+ V + ++   VQ+Y
Sbjct:   56 QVLLGFSVLLVTATILYSVLYYLIIPSRLHEQEIFFDYGDHAALSLSPAARTAAPTLPTAYLNLLKPHHQWEFS--PLVEMEPTDTRVLVPGVKYDVFVELEMPESQVNRDIGMFMLQTTLKSHDGEFLASSARSAIVKDSHSLVE-LVRVFSWLVPYALRVTEPSQTVRVLAVNGFKEGK-------QHPLTSVTLVLNHPAVQIY 252          
BLAST of mRNA_H-elongata_contig75145.15194.1 vs. uniprot
Match: A0A7S1TVB1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TVB1_9STRA)

HSP 1 Score: 106 bits (265), Expect = 1.610e-23
Identity = 69/216 (31.94%), Postives = 107/216 (49.54%), Query Frame = 1
Query:    7 QYLLIFGALLLSAIIIYGALYCVVMPQRLHDRPIYFDYSSRATTGGATATVDFQAQHTQWDLALLPIPIVERP---------------------RKKLLRPGQHYEVGLELLMPTSYVNRKVGVFMVHTTLMDDQDSVLATSARPAMLPHTSSLLKGLTMLFAWPLYLLGLKKEAETISVSCIDFYKASHLHCASRHRHPLSKVKVTVSSGRVQLY 591
            Q +L+   LLLSA  +Y  +Y ++MP RLH +P+Y DY    T    T  VDF A  TQW  +   +P   +                      RK++L+  Q Y + ++L MP S  N + G FM+   L+D+ D+ +ATS RPA + + SSLL+ L +L   P  L  +  E++ + +   D       H   +   P +K +VT+SS  V++Y
Sbjct:   51 QAMLLAIGLLLSATFVYTCIYTLIMPSRLHHQPVYLDY----TADRPTTVVDFLAAETQWAFSETCVPPPSKDVSKESTPPPSSLFSWGSSTPKRKRMLKQRQKYSISVDLEMPESAHNEEAGNFMLEVQLLDEYDTPIATSRRPATIKYKSSLLQKLRVLVLAPFLLGDVLSESQHLYLQMFD-------HFEEQQHMPFTKARVTLSSRDVRVY 255          
BLAST of mRNA_H-elongata_contig75145.15194.1 vs. uniprot
Match: W7TBE7_9STRA (Bernardinelli-seip congenital lipodystrophy 2 protein variant 2 n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TBE7_9STRA)

HSP 1 Score: 102 bits (254), Expect = 6.560e-22
Identity = 71/220 (32.27%), Postives = 110/220 (50.00%), Query Frame = 1
Query:    4 LQYLLIFGALLLSAIIIYGALYCVVMPQRLHDRPIYFDYSSRA------TTGGAT----------------ATVDFQAQHTQWDLALLPIPIV--ERPRKKLLRPGQHYEVGLELLMPTSYVNRKVGVFMVHTTLMDDQDSVLATSARPAMLPHTSSLLKGLTMLFAWPLYLLGLKKEAETISVSCIDFYKASHLHCASRHRHPLSKVKVTVSSGRVQLY 591
            LQYL +  AL+ SA  +Y   Y ++MP +LH++ ++FDY   A      T  G +                A +DF +QH QW    LP P+   E P  ++LRP + Y + +E+ +P S  N  +G FM+   L    D +LA SARP +L + S  ++    L   P+  LG  +EA+ + V+  D ++ S  H       PL+  +V +SS R+ LY
Sbjct:   46 LQYLFLGLALITSATALYTVAYQLIMPTKLHEKELFFDYFPPANPLDPSTCPGLSPSPPSFPPSSPSPYPHAHIDFLSQHNQW----LPSPLTKTEPPLDRILRPERVYVIDVEVTVPDSETNAMLGNFMLFVDLFTKDDDLLAHSARPLILTYRSPWIRFFRSLLLAPVLALGFAQEAQVLRVTFFDRFRESLAH-------PLAHARVRLSSPRLHLY 254          
BLAST of mRNA_H-elongata_contig75145.15194.1 vs. uniprot
Match: A0A2D4BPB8_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BPB8_PYTIN)

HSP 1 Score: 94.7 bits (234), Expect = 1.890e-19
Identity = 64/200 (32.00%), Postives = 102/200 (51.00%), Query Frame = 1
Query:   25 GALLLSAIIIYGALYCVVMPQRLHDRPIYFDYSSRATTGGA----------TATVDFQAQHTQWDLALLPIPIVERPRKKLLRPGQHYEVGLELLMPTSYVNRKVGVFMVHTTLMDDQDSVLATSARPAMLPHTSSLLKGLTMLFAWPL-YLLGLKKEAETISVSCIDFYKASHLHCASRHRHPLSKVKVTVSSGRVQLY 591
              L  +A ++Y ALY V+MP RLH++ ++FDY + A    +          TA +D      QW  + L  P        +L P   Y+V +EL +P S  NR +G+FM++TTL    + VLA SARP ++  +   ++    L AW + Y L + +  +T+SV  I  ++ S         HPL+ V VT++   +Q+Y
Sbjct:   57 SVLFATATVLYSALYYVIMPSRLHEQQVFFDYGTHAALSLSDPRAFPLTLPTARLDLLNAEQQWTASALAYPS-RSTAASVLVPDVTYDVIVELTVPESATNRAIGMFMMNTTLSTHDERVLAASARPVIVKDSHLAVQWARAL-AWLVPYALRVTEPTQTLSVLVIXGFRESK-------EHPLTGVTVTLNHPAIQIY 247          
BLAST of mRNA_H-elongata_contig75145.15194.1 vs. uniprot
Match: A0A5D6YCZ6_9STRA (Non-specific serine/threonine protein kinase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YCZ6_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 5.710e-19
Identity = 65/201 (32.34%), Postives = 108/201 (53.73%), Query Frame = 1
Query:   31 LLLSAIIIYGALYCVVMPQRLHDRPIYFDYSSRATTGG---------ATATVDFQAQHTQWDLALLPIPIVERPRKK--LLRPGQHYEVGLELLMPTSYVNRKVGVFMVHTTLMDDQDSVLATSARPAMLPHTSSLLKGL---TMLFAWPLYLLGLKKEAETISVSCIDFYKASHLHCASRHRHPLSKVKVTVSSGRVQLY 591
            L ++A ++Y  +Y +V+P RLH++ I+FDY   A              TAT++      QWD +    P+V+ P +   +L PG  Y+V +EL +P S  N ++G+FMV TTL   +  VLA SARPA++    +L++ L    M F+   + LGL + ++ + +  I+  + S  H       PL+ V V ++  +VQ+Y
Sbjct:   64 LFVTATVLYSIVYYLVIPARLHEQEIFFDYGDHAALAKHGLPARFTLPTATLNLLDAEHQWDAS----PLVQLPTRAPPVLVPGVTYDVFIELTVPESRANVEIGMFMVSTTLKSFESEVLAASARPAIVHEAHALVRWLRVGAMAFS---HALGLTEPSQLLHILAINGLQESKTH-------PLTTVVVRLNHPQVQVY 250          
BLAST of mRNA_H-elongata_contig75145.15194.1 vs. uniprot
Match: K3WY91_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WY91_GLOUD)

HSP 1 Score: 92.8 bits (229), Expect = 7.820e-19
Identity = 62/193 (32.12%), Postives = 105/193 (54.40%), Query Frame = 1
Query:   40 SAIIIYGALYCVVMPQRLHDRPIYFDYSSRATTGGATATVDFQAQHTQWDLALL-PI------PIVERPR--KKLLRPGQHYEVGLELLMPTSYVNRKVGVFMVHTTLMDDQDSVLATSARPAMLPHTSSLLKGLTMLFAWPLYLLGLKKEAETISVSCIDFYKASHLHCASRHRHPLSKVKVTVSSGRVQLY 591
            +A I+Y  LY +V+P RLH++ I+FDY + A+     + +  Q       L LL P+      P+V+ P   +++L PG  Y++ +EL +P S VN  +G+FMV TTL       LA+SAR A++  + SL++ + +     L+ LGL + A+ + V  I+    S  H       PL+  ++T++   +Q+Y
Sbjct:   66 TATILYSLLYYLVIPSRLHEQEIFFDYGNHASLVAEGSGLGHQLTLPTAKLNLLDPVHQWNASPVVKLPAHPQQVLVPGVKYDIYIELTVPESRVNADIGMFMVSTTLKSTDGQYLASSARSAIVHDSHSLVRWIRVGALAVLHALGLTEPAQVLDVLAINGIMESKTH-------PLTTAEITLNHPAIQIY 251          
BLAST of mRNA_H-elongata_contig75145.15194.1 vs. uniprot
Match: A0A0P1AKY1_PLAHL (Uncharacterized conserved protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AKY1_PLAHL)

HSP 1 Score: 87.4 bits (215), Expect = 7.850e-17
Identity = 62/196 (31.63%), Postives = 103/196 (52.55%), Query Frame = 1
Query:   31 LLLSAIIIYGALYCVVMPQRLHDRPIYFDYS------SRATTGGAT---ATVDFQAQHTQWDLALLPIPIVERPRKKLLRPGQHYEVGLELLMPTSYVNRKVGVFMVHTTLMDDQDSVLATSARPAMLPHTSSLLKGLTMLFAWPLYLLGLKKEAETISVSCIDFYKASHLHCASRHRHPLSKVKVTVSSGRVQLY 591
            L + A + Y  LY +V+P R H++ I+F Y       ++  T   T   A+++    + QW      I   ++  + +L PG  Y+V +EL++P S  N  VG+FMV TTL +DQ+  LATSARP  L      ++ L + F    Y LG  + A+T+ V+ I+ Y+ S          PL++V + +++  +Q+Y
Sbjct:   65 LFIMASLFYAVLYFLVIPSRFHEQDIFFHYGVHHKDMNKYMTFMPTVPKASLNLLDPNHQWQSL---ISTHKKTTQPVLVPGVKYDVIVELIVPESRTNVDVGMFMVSTTLFNDQEKELATSARPVTLHDMPLPVRWLKLAFWVVPYTLGFSEPAQTLRVTMINGYEESV-------EFPLTRVDIELNTPELQVY 250          
BLAST of mRNA_H-elongata_contig75145.15194.1 vs. uniprot
Match: A0A024GC99_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GC99_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 2.530e-16
Identity = 65/208 (31.25%), Postives = 104/208 (50.00%), Query Frame = 1
Query:    4 LQYLLIFGALLLSAIIIYGALYCVVMPQRLHDRPIYFDYSSRA----------TTGGATATVDFQAQHTQWDLALLPIPIVERPRKKLLRPGQHYEVGLELLMPTSYVNRKVGVFMVHTTLMDDQDSV-LATSARPAMLPHTSSLLKGLTMLFAWPL-YLLGLKKEAETISVSCIDFYKASHLHCASRHRHPLSKVKVTVSSGRVQLY 591
            LQ+    G L  SA +IY  +Y ++MP R HD+ IYFDY + A               TA +D    H  W         V+  +K LL  G  Y++ +EL +P S VN K+G+FM++T +      + LA+SARP ++  T+SL++ L     W   +LL L +  + I V  +  Y+ +        + PL+ VK+ ++   +Q+Y
Sbjct:   54 LQFCTALGLLFASAALIYALMYHLIMPTRCHDQEIYFDYGNHAHLVRDYDRKLNLTLPTAKLDLLEPHRHWKSHTE----VDARKKGLLVAGVKYDLFVELNVPESSVNYKIGMFMIYTHVQTAGGKMTLASSARPVIVRETNSLIR-LVQRGVWFFPHLLSLSEPTQRIWVPVMIGYEENK-------KSPLTNVKIVLNHPEIQIY 249          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig75145.15194.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4V6_ECTSI1.480e-8465.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JEL4_9PHAE6.670e-8167.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A8K1C7V7_PYTOL3.930e-2433.33Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S1TVB1_9STRA1.610e-2331.94Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
W7TBE7_9STRA6.560e-2232.27Bernardinelli-seip congenital lipodystrophy 2 prot... [more]
A0A2D4BPB8_PYTIN1.890e-1932.00Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A5D6YCZ6_9STRA5.710e-1932.34Non-specific serine/threonine protein kinase n=1 T... [more]
K3WY91_GLOUD7.820e-1932.12Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A0P1AKY1_PLAHL7.850e-1731.63Uncharacterized conserved protein n=1 Tax=Plasmopa... [more]
A0A024GC99_9STRA2.530e-1631.25Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig75145contigH-elongata_contig75145:196..3050 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score260.8
Seed ortholog evalue5.3e-67
Seed eggNOG ortholog2880.D7G4V6
Preferred nameBSCL2
KEGG koko:K02880,ko:K19365
KEGG Pathwayko03010,map03010
KEGG ModuleM00177
GOsGO:0000003,GO:0001558,GO:0003006,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0006638,GO:0006639,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0006873,GO:0006874,GO:0006875,GO:0006950,GO:0006996,GO:0007275,GO:0007399,GO:0008150,GO:0008152,GO:0008361,GO:0008610,GO:0009056,GO:0009058,GO:0009062,GO:0009605,GO:0009791,GO:0009846,GO:0009856,GO:0009889,GO:0009892,GO:0009894,GO:0009895,GO:0009987,GO:0009991,GO:0010154,GO:0010162,GO:0010344,GO:0010431,GO:0010720,GO:0010769,GO:0010770,GO:0010876,GO:0010883,GO:0010884,GO:0010975,GO:0010976,GO:0012505,GO:0016020,GO:0016021,GO:0016042,GO:0016043,GO:0016054,GO:0019216,GO:0019222,GO:0019395,GO:0019637,GO:0019725,GO:0019752,GO:0019915,GO:0021700,GO:0022008,GO:0022414,GO:0022603,GO:0022604,GO:0022607,GO:0022611,GO:0030003,GO:0030154,GO:0030176,GO:0030258,GO:0030307,GO:0030516,GO:0031224,GO:0031227,GO:0031323,GO:0031344,GO:0031346,GO:0031667,GO:0031984,GO:0032101,GO:0032103,GO:0032469,GO:0032501,GO:0032502,GO:0032504,GO:0032535,GO:0032787,GO:0032879,GO:0033036,GO:0034389,GO:0034440,GO:0040008,GO:0042175,GO:0042592,GO:0042594,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043900,GO:0044085,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044706,GO:0045444,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0045773,GO:0045833,GO:0045927,GO:0046339,GO:0046395,GO:0046473,GO:0046486,GO:0046890,GO:0048316,GO:0048518,GO:0048519,GO:0048522,GO:0048583,GO:0048584,GO:0048608,GO:0048609,GO:0048638,GO:0048639,GO:0048679,GO:0048680,GO:0048686,GO:0048687,GO:0048690,GO:0048691,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0048878,GO:0050767,GO:0050769,GO:0050770,GO:0050772,GO:0050789,GO:0050793,GO:0050794,GO:0050801,GO:0050896,GO:0050994,GO:0050995,GO:0051094,GO:0051128,GO:0051130,GO:0051179,GO:0051235,GO:0051239,GO:0051240,GO:0051704,GO:0051960,GO:0051962,GO:0055065,GO:0055074,GO:0055080,GO:0055082,GO:0055114,GO:0060284,GO:0061387,GO:0061458,GO:0065007,GO:0065008,GO:0070570,GO:0070572,GO:0070925,GO:0071695,GO:0071704,GO:0071840,GO:0072329,GO:0072503,GO:0072507,GO:0080090,GO:0080134,GO:0080135,GO:0080154,GO:0080155,GO:0090066,GO:0090207,GO:0098771,GO:0098827,GO:0120035,GO:0140042,GO:1901575,GO:1901576,GO:1903034,GO:1903036,GO:1905952,GO:1905954,GO:2000026,GO:2000241
EggNOG free text desc.lipid storage
EggNOG OGsKOG4200@1,KOG4200@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko03011
Hectar predicted targeting categorysignal peptide
Exons5
Model size591
Cds size591
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig75145.15194.1prot_H-elongata_contig75145.15194.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig75145 196..3050 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931156.5728993-CDS-H-elongata_contig75145:195..3331622931156.5728993-CDS-H-elongata_contig75145:195..333Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig75145 196..333 +
1691679721.5230553-CDS-H-elongata_contig75145:195..3331691679721.5230553-CDS-H-elongata_contig75145:195..333Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig75145 196..333 +
1622931156.5845861-CDS-H-elongata_contig75145:681..7761622931156.5845861-CDS-H-elongata_contig75145:681..776Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig75145 682..776 +
1691679721.5347118-CDS-H-elongata_contig75145:681..7761691679721.5347118-CDS-H-elongata_contig75145:681..776Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig75145 682..776 +
1622931156.621804-CDS-H-elongata_contig75145:2060..21481622931156.621804-CDS-H-elongata_contig75145:2060..2148Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig75145 2061..2148 +
1691679721.5440423-CDS-H-elongata_contig75145:2060..21481691679721.5440423-CDS-H-elongata_contig75145:2060..2148Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig75145 2061..2148 +
1622931156.6361182-CDS-H-elongata_contig75145:2490..27061622931156.6361182-CDS-H-elongata_contig75145:2490..2706Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig75145 2491..2706 +
1691679721.5544949-CDS-H-elongata_contig75145:2490..27061691679721.5544949-CDS-H-elongata_contig75145:2490..2706Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig75145 2491..2706 +
1622931156.6475916-CDS-H-elongata_contig75145:2996..30501622931156.6475916-CDS-H-elongata_contig75145:2996..3050Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig75145 2997..3050 +
1691679721.5653636-CDS-H-elongata_contig75145:2996..30501691679721.5653636-CDS-H-elongata_contig75145:2996..3050Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig75145 2997..3050 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig75145.15194.1

>prot_H-elongata_contig75145.15194.1 ID=prot_H-elongata_contig75145.15194.1|Name=mRNA_H-elongata_contig75145.15194.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=197bp
GLQYLLIFGALLLSAIIIYGALYCVVMPQRLHDRPIYFDYSSRATTGGAT
ATVDFQAQHTQWDLALLPIPIVERPRKKLLRPGQHYEVGLELLMPTSYVN
RKVGVFMVHTTLMDDQDSVLATSARPAMLPHTSSLLKGLTMLFAWPLYLL
GLKKEAETISVSCIDFYKASHLHCASRHRHPLSKVKVTVSSGRVQLY
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mRNA from alignment at H-elongata_contig75145:196..3050+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig75145.15194.1 ID=mRNA_H-elongata_contig75145.15194.1|Name=mRNA_H-elongata_contig75145.15194.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2855bp|location=Sequence derived from alignment at H-elongata_contig75145:196..3050+ (Himanthalia elongata Himel1 dioecious)
GGTTTGCAGTACCTGCTAATATTTGGAGCACTGCTGCTGTCAGCCATCAT AATCTACGGCGCTCTATACTGCGTGGTGATGCCTCAACGCCTTCACGACA GACCCATATACTTCGATTACTCCAGCCGAGCAACCACCGTAAGTTGATTT TCCGTGTTCTTGCATAAGCTTGTAACGTACGAAGTACCTCAGGCTGTCTT TCGTTCTTCACGGAATTCTGGTGAGTGTTTTCCCCGATCGAGCCCGTCTC TCGCGGTGTTAGATTAGCCTGAATCGGAGTTGGGTGGGCATTCCTCGCGA TGGTGGGTAGAAGTGAATAAGATCGCTGCAGGCTCTTCATGAGCTGATCC TGTTCCTGGCAGGTTGCACCGAGTGTCCGTCCACTAGTCTATGACGCTTG TACCGACATATACCTGCCATGCGCGGCTCCCGCAGCAGAAAATAACGCAT ACCTGCACGGGTGCGTTGACGTGCTCTATCCCACAGGGCGGCGCGACGGC GACTGTAGACTTTCAAGCGCAACACACCCAGTGGGATCTGGCCTTGCTCC CGATACCGATAGTAGAGCGACCCCGAAAGAAGTGAGTTCGCTCGATGTTC CTGAAATAATCTAGGAGCGCTATGTGCATGTTAGACGTGGCGGATGATTT ATTTTCCTTGCATCATGACCAGGTTTCTCTACGTAGGACCCGCTGTTGAT GCCGCGTTAATCCCAATGTTCACCATGCGGGCTAATTCTCATGTAGAAGA CCTCCCGGCAGGTTTGAGTGCTGCGATTGAACGGGTGCTGCTTGCAGATT GCATTTTGGCGAGGCTTGAATTGCGTTTACTTGGCACCCCTGCGGTCTCG ATTTTTCGGCTAGCAATATGTGCATTAAAATAACTGCACCAATCGATGGT GATAGCGATTTTCGGTAATTTTTTCGAGCATGGTGCAGTTTATGCAGTGT GTCCCGCGAGTTCAGAGACCTCGGGCGAAGAGTCTCGTCTCCGCCAAAGG GGCGATAGCTTATCACGTTCACGTTCTATAAACTTCCTACTGACTGCTGA ACGATATAATTTTGAAACGCCCTAGAGCAAGCATTACCATGTGAGTAGTA CTCCGCCAGGAGTATTCACGAGCAGATTATAGTCCTAGTGCATCACACAC ATACCGTTGTTGTGTATGTTGTGTGTGTGTGGCACATGAACTATGATATA GTGTATTATAGTATAATATAATGTAGTGTAGTGTAGTGTAGTATATAACG ATAGCACCCGCTGAATGTGCAACATTTACTTATGATTGATTGATTGAATT CTCACGTAAGCTGATGTAAAAAATCCAGCCCGTGGTCAAAAGGTAGAAAA AAAACACCATCCGGAAGGAGAAAAACGTTCAAAAAAGGTACTCTCCAATA CAAAAGGAAAAAGCGACATCTCCAAAGAAAAAGAAATATGGTGTGTCCAA TGAACCTTATGGCATATCCGGTTTGACGTTGCAAATGCAGCTTAACCGGC GAAAGACCGCTTCGTCCTGGCATTGTTGGAATACAGCATGCGTGATATAT GTCCGTGAGGATACGATTTGCGCAAACACAAAAAATGCCACCCCCCTTGT AAAACAGCCCGTCATCCCTGCCATTCAGAGGCAAATGATCGCAGGTATAA CTTTTGCATGAGCTGTTTTTTAACATTTACCTCCCCGGTGTCATTAAAAG CAGAAGGACGTCTGACGTTTGCGAATCAGAGTACGGTTGGTTTTATATCG TGATTTTTCAGCCAACGTCCAGTGTCGCATACCCTCGACCCGATTCTATT AAAAAAAAATCGTTCTCTCCGTGCCATTCCTTGCCATTTTTTTACGTGAT GGCGGTCGGGCTCAGGTTGCTGAGACCCGGGCAGCATTACGAGGTTGGCC TGGAGCTCTTGATGCCGACTTCCTACGTCAACAGAAAAGTTGGGGTTTTC ATGGTACAATACGAAAATTCCCAGCGTCTTTTCCCTCACGTTGCCGGCAC CACGACAGAGCGAGCGTGATCCCTGACAGCAAACTCGCGACGGCGGACCC TTACGTAGCTTTAGACAGCCGTCCCCACCGTGAAGGTGATCTGCGTGAAC GATAGCCGTGCCCAGGTCGAGACATCGCAGATTGTGTTTTTACTGCACAA CTCATCTTCGAACAGAAAGTGTTCTCCGAAAACGGGAGTGCCGGAGCGCT CGAATTAATCACCACCGTTCATTTTTTGGTTGTGCTGTCGCATCCAAACA CGTGCCAAACATCTCGATACAACGTCGTGGTATTGGACGACAAAGGTTCA CACGACCTTGATGGACGACCAAGACAGCGTGCTGGCCACGTCGGCTCGCC CCGCTATGCTGCCCCACACGTCGAGTCTCTTGAAGGGCCTTACGATGCTG TTTGCTTGGCCACTTTACTTACTGGGGCTAAAAAAAGAGGCGGAAACGAT CTCTGTGTCTTGCATCGATTTCTACAAGGCGAGCCACTTGCACTGCGCTT CCCGGCATCGCGTGGTTGGGTGTGGACTCGACGCCTTTGACTGAAGAGTT GCCTCGCTTGGCTCCATGAGGATCATATATTTCTTATCTCTGTAATATAA GTCTTTATGGTATTATGCTGTCGGGCCGGGAGTTTGGTGTGTAAGTTCTT CACCCCGGTGTACATCGCACATGTCGGCGTACGTTGCCATGAAAATGAAG CAGAGAACTGCTGGAACGCTTCGTTGGAGCTCCGCTCGTTTGACCTGCTT GTGTTGACCCGAAATCCGCTCGTGGACTTGCCCTCACAGGAAGACTCGCA GCATCCGTTGAGTAAAGTGAAAGTCACCGTTTCGAGCGGCCGTGTGCAGT TGTAC
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Coding sequence (CDS) from alignment at H-elongata_contig75145:196..3050+

>mRNA_H-elongata_contig75145.15194.1 ID=mRNA_H-elongata_contig75145.15194.1|Name=mRNA_H-elongata_contig75145.15194.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1182bp|location=Sequence derived from alignment at H-elongata_contig75145:196..3050+ (Himanthalia elongata Himel1 dioecious)
GGTTTGCAGTACCTGCTAATATTTGGAGCACTGCTGCTGTCAGCCATCAT
AATCTACGGCGCTCTATACTGCGTGGTGATGCCTCAACGCCTTCACGACA
GACCCATATACTTCGATTACTCCAGCCGAGCAACCACCGGTTTGCAGTAC
CTGCTAATATTTGGAGCACTGCTGCTGTCAGCCATCATAATCTACGGCGC
TCTATACTGCGTGGTGATGCCTCAACGCCTTCACGACAGACCCATATACT
TCGATTACTCCAGCCGAGCAACCACCGGCGGCGCGACGGCGACTGTAGAC
TTTCAAGCGCAACACACCCAGTGGGATCTGGCCTTGCTCCCGATACCGAT
AGTAGAGCGACCCCGAAAGAAGGCGGCGCGACGGCGACTGTAGACTTTCA
AGCGCAACACACCCAGTGGGATCTGGCCTTGCTCCCGATACCGATAGTAG
AGCGACCCCGAAAGAAGTTGCTGAGACCCGGGCAGCATTACGAGGTTGGC
CTGGAGCTCTTGATGCCGACTTCCTACGTCAACAGAAAAGTTGGGGTTTT
CATGGTTGCTGAGACCCGGGCAGCATTACGAGGTTGGCCTGGAGCTCTTG
ATGCCGACTTCCTACGTCAACAGAAAAGTTGGGGTTTTCATGGTTCACAC
GACCTTGATGGACGACCAAGACAGCGTGCTGGCCACGTCGGCTCGCCCCG
CTATGCTGCCCCACACGTCGAGTCTCTTGAAGGGCCTTACGATGCTGTTT
GCTTGGCCACTTTACTTACTGGGGCTAAAAAAAGAGGCGGAAACGATCTC
TGTGTCTTGCATCGATTTCTACAAGGCGAGCCACTTGCACTGCGCTTCCC
GGCATCGCGTTCACACGACCTTGATGGACGACCAAGACAGCGTGCTGGCC
ACGTCGGCTCGCCCCGCTATGCTGCCCCACACGTCGAGTCTCTTGAAGGG
CCTTACGATGCTGTTTGCTTGGCCACTTTACTTACTGGGGCTAAAAAAAG
AGGCGGAAACGATCTCTGTGTCTTGCATCGATTTCTACAAGGCGAGCCAC
TTGCACTGCGCTTCCCGGCATCGCCATCCGTTGAGTAAAGTGAAAGTCAC
CGTTTCGAGCGGCCGTGTGCAGTTGTACCATCCGTTGAGTAAAGTGAAAG
TCACCGTTTCGAGCGGCCGTGTGCAGTTGTAC
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