prot_H-elongata_contig74978.15176.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig74978.15176.1
Unique Name	prot_H-elongata_contig74978.15176.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	98

Homology

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BLAST of mRNA_H-elongata_contig74978.15176.1 vs. uniprot
Match: D7FXT2_ECTSI (Putative subunit of the Anaphase Promoting Complex n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXT2_ECTSI)

HSP 1 Score: 161 bits (408), Expect = 3.750e-46
Identity = 75/93 (80.65%), Postives = 85/93 (91.40%), Query Frame = 0

Query:    4 GLRTLASLLVVLGKGYQYLMQFRCAEALEELKRLSPAQFCTGWVLHQVGKAYFERADYANAKSALESMQRYDPHRLEGLDLLSTTLWHLKREV 96
            G+R +A+LL+VL K YQ+LMQFRC EAL+EL RL P Q+CTGWVLHQVG+AYFERADY NAKSALESMQRYDPHR+EGLDLLSTTLWHLKR+V
Sbjct:   76 GVRAVAALLLVLSKAYQHLMQFRCPEALQELGRLPPQQYCTGWVLHQVGRAYFERADYGNAKSALESMQRYDPHRMEGLDLLSTTLWHLKRDV 168

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BLAST of mRNA_H-elongata_contig74978.15176.1 vs. uniprot
Match: A0A6H5JEK2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEK2_9PHAE)

HSP 1 Score: 159 bits (402), Expect = 2.960e-43
Identity = 74/93 (79.57%), Postives = 84/93 (90.32%), Query Frame = 0

Query:    4 GLRTLASLLVVLGKGYQYLMQFRCAEALEELKRLSPAQFCTGWVLHQVGKAYFERADYANAKSALESMQRYDPHRLEGLDLLSTTLWHLKREV 96
            G+R +A+LL+VL K YQ+L QFRC EAL+EL RL P Q+CTGWVLHQVG+AYFERADY NAKSALESMQRYDPHR+EGLDLLSTTLWHLKR+V
Sbjct:  631 GVRAVAALLLVLSKAYQHLTQFRCPEALQELGRLPPQQYCTGWVLHQVGRAYFERADYGNAKSALESMQRYDPHRMEGLDLLSTTLWHLKRDV 723

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BLAST of mRNA_H-elongata_contig74978.15176.1 vs. uniprot
Match: A0A7S4QN69_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QN69_9STRA)

HSP 1 Score: 117 bits (293), Expect = 1.540e-28
Identity = 55/95 (57.89%), Postives = 71/95 (74.74%), Query Frame = 0

Query:    2 EAGLRTLASLLVVLGKGYQYLMQFRCAEALEELKRLSPAQFCTGWVLHQVGKAYFERADYANAKSALESMQRYDPHRLEGLDLLSTTLWHLKREV 96
            + G++ +  LL  LG   + L QFRC EAL+   +L   QF TGWV HQVG+AYFE ADY N+K ALE+MQR +PHR++GL++LSTTLWHLK+EV
Sbjct:  673 DGGVQAILELLCTLGAAQKLLCQFRCREALQIFHQLPFQQFNTGWVQHQVGRAYFEMADYQNSKRALETMQRVEPHRMKGLEVLSTTLWHLKKEV 767

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BLAST of mRNA_H-elongata_contig74978.15176.1 vs. uniprot
Match: A0A7S2XUI4_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XUI4_9STRA)

HSP 1 Score: 110 bits (274), Expect = 5.560e-26
Identity = 51/95 (53.68%), Postives = 68/95 (71.58%), Query Frame = 0

Query:    2 EAGLRTLASLLVVLGKGYQYLMQFRCAEALEELKRLSPAQFCTGWVLHQVGKAYFERADYANAKSALESMQRYDPHRLEGLDLLSTTLWHLKREV 96
              G++ +  LL  LG   +    +RC EAL+   +L   QF TGWV HQVG+A+FE ADY NA+ ALE+MQR +PHR++GL++LSTTLWHLK+EV
Sbjct:  457 NGGVQQVLELLCTLGAAQRLFCNYRCQEALQVFYKLPHDQFQTGWVQHQVGRAFFEMADYENAQRALETMQRLEPHRMKGLEVLSTTLWHLKKEV 551

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BLAST of mRNA_H-elongata_contig74978.15176.1 vs. uniprot
Match: B8BVV5_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BVV5_THAPS)

HSP 1 Score: 107 bits (266), Expect = 1.120e-25
Identity = 50/86 (58.14%), Postives = 62/86 (72.09%), Query Frame = 0

Query:   11 LLVVLGKGYQYLMQFRCAEALEELKRLSPAQFCTGWVLHQVGKAYFERADYANAKSALESMQRYDPHRLEGLDLLSTTLWHLKREV 96
            LL   G  Y+YL Q R  +ALE  + L  +Q  TGWV HQ+GKAYFE +DY NA+ AL  MQR +PHR++GLD+LST LWHLK+EV
Sbjct:   29 LLCSFGAAYKYLCQHRSQDALELFRELPSSQINTGWVQHQIGKAYFEMSDYQNAERALGKMQRAEPHRMKGLDILSTALWHLKKEV 114

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BLAST of mRNA_H-elongata_contig74978.15176.1 vs. uniprot
Match: A0A7S4N5K4_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N5K4_9STRA)

HSP 1 Score: 108 bits (271), Expect = 1.430e-25
Identity = 50/95 (52.63%), Postives = 70/95 (73.68%), Query Frame = 0

Query:    2 EAGLRTLASLLVVLGKGYQYLMQFRCAEALEELKRLSPAQFCTGWVLHQVGKAYFERADYANAKSALESMQRYDPHRLEGLDLLSTTLWHLKREV 96
            + G+R +  LL  LG   + L Q+RC +AL+   +L  +QF TGWV HQVG+A+FE ADY +A+ ALE+M R +PHR++GL++LST LWHLK+EV
Sbjct:  709 DGGVREILELLCTLGAAQRQLCQYRCQDALQIFHQLPHSQFDTGWVQHQVGRAHFEMADYHSAQRALEAMHRAEPHRMKGLEVLSTALWHLKKEV 803

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BLAST of mRNA_H-elongata_contig74978.15176.1 vs. uniprot
Match: A0A1E7FSU3_9STRA (TPR-like protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FSU3_9STRA)

HSP 1 Score: 104 bits (260), Expect = 6.870e-25
Identity = 50/95 (52.63%), Postives = 65/95 (68.42%), Query Frame = 0

Query:    2 EAGLRTLASLLVVLGKGYQYLMQFRCAEALEELKRLSPAQFCTGWVLHQVGKAYFERADYANAKSALESMQRYDPHRLEGLDLLSTTLWHLKREV 96
            +  ++++  L  +LG GY  L QFRC E+L+    L   Q  TGWVLHQ G+AYFE A+Y NA+  LE MQ  +PHR++GLDLLST LW LK+EV
Sbjct:    5 DGAVQSILELFCLLGAGYWRLCQFRCRESLQLFSVLPHVQHNTGWVLHQEGRAYFEMAEYQNAQRCLELMQGVEPHRMKGLDLLSTVLWQLKKEV 99

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BLAST of mRNA_H-elongata_contig74978.15176.1 vs. uniprot
Match: A0A7S3VB12_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VB12_9STRA)

HSP 1 Score: 105 bits (263), Expect = 1.730e-24
Identity = 51/95 (53.68%), Postives = 67/95 (70.53%), Query Frame = 0

Query:    2 EAGLRTLASLLVVLGKGYQYLMQFRCAEALEELKRLSPAQFCTGWVLHQVGKAYFERADYANAKSALESMQRYDPHRLEGLDLLSTTLWHLKREV 96
            ++G+R +  LL   G   + L  F+C EAL+ L  L  +QF TGWV HQVG+AYF   DY NA+ ALE+MQ+ +PHR+ GL+LLSTTLW LK+EV
Sbjct:  721 QSGVRYILELLCTCGAAQRMLCAFKCKEALQILHTLPYSQFQTGWVQHQVGRAYFALVDYTNAQRALETMQQVEPHRMRGLELLSTTLWLLKKEV 815

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BLAST of mRNA_H-elongata_contig74978.15176.1 vs. uniprot
Match: A0A7S0FBT8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizosolenia setigera TaxID=3005 RepID=A0A7S0FBT8_9STRA)

HSP 1 Score: 104 bits (260), Expect = 4.330e-24
Identity = 50/95 (52.63%), Postives = 66/95 (69.47%), Query Frame = 0

Query:    2 EAGLRTLASLLVVLGKGYQYLMQFRCAEALEELKRLSPAQFCTGWVLHQVGKAYFERADYANAKSALESMQRYDPHRLEGLDLLSTTLWHLKREV 96
            E  +  + SLL  LG  Y+ L  ++C  AL+ L  LSP Q+ TGWV HQ+GK+YFE ADY NA  AL+ M   DP R++GLD+LST+LWHL++EV
Sbjct:  470 EESIHHILSLLCHLGTAYKLLCNYQCQPALQILHYLSPDQYETGWVQHQIGKSYFEMADYPNAVLALQRMMETDPSRVKGLDILSTSLWHLRKEV 564

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BLAST of mRNA_H-elongata_contig74978.15176.1 vs. uniprot
Match: A0A448YYH5_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YYH5_9STRA)

HSP 1 Score: 102 bits (253), Expect = 3.850e-23
Identity = 48/95 (50.53%), Postives = 64/95 (67.37%), Query Frame = 0

Query:    2 EAGLRTLASLLVVLGKGYQYLMQFRCAEALEELKRLSPAQFCTGWVLHQVGKAYFERADYANAKSALESMQRYDPHRLEGLDLLSTTLWHLKREV 96
            +  ++ +  L  ++G GY  L QFRC EAL+    L      TGWVLHQ G+A+FE A+Y NA+  LE+MQ  +PHR++GLDLLST LW LK+EV
Sbjct:  596 DGSIQNILELFCLMGAGYWRLCQFRCQEALQLFGVLPHVHHNTGWVLHQEGRAFFEMAEYQNAQRCLETMQGVEPHRMKGLDLLSTVLWQLKKEV 690

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig74978.15176.1 vs. uniprot

BLAST of mRNA_H-elongata_contig74978.15176.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FXT2_ECTSI	3.750e-46	80.65	Putative subunit of the Anaphase Promoting Complex...	[more]
A0A6H5JEK2_9PHAE	2.960e-43	79.57	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A7S4QN69_9STRA	1.540e-28	57.89	Hypothetical protein n=3 Tax=Ditylum brightwellii ...	[more]
A0A7S2XUI4_9STRA	5.560e-26	53.68	Hypothetical protein n=1 Tax=Attheya septentrional...	[more]
B8BVV5_THAPS	1.120e-25	58.14	Uncharacterized protein n=1 Tax=Thalassiosira pseu...	[more]
A0A7S4N5K4_9STRA	1.430e-25	52.63	Hypothetical protein n=1 Tax=Odontella aurita TaxI...	[more]
A0A1E7FSU3_9STRA	6.870e-25	52.63	TPR-like protein n=1 Tax=Fragilariopsis cylindrus ...	[more]
A0A7S3VB12_9STRA	1.730e-24	53.68	Hypothetical protein n=1 Tax=Chaetoceros debilis T...	[more]
A0A7S0FBT8_9STRA	4.330e-24	52.63	Hypothetical protein (Fragment) n=1 Tax=Rhizosolen...	[more]
A0A448YYH5_9STRA	3.850e-23	50.53	Uncharacterized protein n=1 Tax=Pseudo-nitzschia m...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10		coord: 3..77 e-value: 6.4E-18 score: 66.8
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 7..94
None	No IPR available	PANTHER	PTHR12558:SF25		coord: 3..94
None	No IPR available	PANTHER	PTHR12558	CELL DIVISION CYCLE 16,23,27	coord: 3..94

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig74978	contig	H-elongata_contig74978:45..1922 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig74978.15176.1	mRNA_H-elongata_contig74978.15176.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig74978 45..1922 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig74978.15176.1 ID=prot_H-elongata_contig74978.15176.1|Name=mRNA_H-elongata_contig74978.15176.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=98bp
VEAGLRTLASLLVVLGKGYQYLMQFRCAEALEELKRLSPAQFCTGWVLHQ
VGKAYFERADYANAKSALESMQRYDPHRLEGLDLLSTTLWHLKREVS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf