prot_H-elongata_contig74869.15164.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig74869.15164.1
Unique Nameprot_H-elongata_contig74869.15164.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length277
Homology
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BLAST of mRNA_H-elongata_contig74869.15164.1 vs. uniprot
Match: A0A6H5KM98_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM98_9PHAE)

HSP 1 Score: 222 bits (566), Expect = 4.580e-67
Identity = 139/273 (50.92%), Postives = 166/273 (60.81%), Query Frame = 0 
Query:    2 LVPGVMLTISCRGAEAIMRFAEEVQQKDGEHVGGREKAALDIVAEAIMQVPFVTRRDGPRTGLLVTKLQATVRGWLARRLARSMILRGGCRREIDDRSGAWVYVWSCDPASP--ENTTYPPTGSSYRESGEADGGVPYWS--------------WRPPAVLKSESLPSPRAARRRAETEERKKNATLTFFYSLLESQREYLCLRGAREESLVELAAVVRLVERAEKSLRDVSLDHRFGSNSSPGRISIRVLHPRGGEPWDGTRDRIAADIAAA 258
            LVPG MLT+S     A+  FAEEV  +  E+   R K AL IV EA  +V F  RR+ PRTG+LV    A VRGWLARRLAR ++LRGGCRRE+D  SGAW YVWS   A P     T  P  +SY  +G   GG  Y S              W PPA+LK+ESLPSPRAA RR E E RK+ A L    SLL+ QR  L  R AR   L+ L  VV+LVERA  SL D +L   FG++S P  IS++VLHPRGGEPWDG R+ +  +I +A
Sbjct:   96 LVPGAMLTLSNTAVAAVKAFAEEVLAE--ENPAQRAKKALAIVKEATTEVAFANRRNHPRTGVLV----AVVRGWLARRLARVLLLRGGCRRELDVASGAWQYVWSHRAAVPGAPTATAGPGRASY--AGGGSGGXXYRSPVXXXXXXEGLFRTWYPPALLKNESLPSPRAAARRVEGEGRKREARLALANSLLDDQRAELNRRDARAARLLALVEVVKLVERAMASLEDAALSC-FGTDSEPLAISVKVLHPRGGEPWDGAREAVVTEIISA 359
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BLAST of mRNA_H-elongata_contig74869.15164.1 vs. uniprot
Match: D7G1T7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1T7_ECTSI)

HSP 1 Score: 214 bits (545), Expect = 3.250e-60
Identity = 135/271 (49.82%), Postives = 162/271 (59.78%), Query Frame = 0 
Query:    2 LVPGVMLTISCRGAEAIMRFAEEVQQKDGEHVGGREKAALDIVAEAIMQVPFVTRRDGPRTGLLVTKLQATVRGWLARRLARSMILRGGCRREIDDRSGAWVYVWS---CDPASPENTTYPPT---------GSSYRESG-EADGGVPYW-SWRPPAVLKSESLPSPRAARRRAETEERKKNATLTFFYSLLESQREYLCLRGAREESLVELAAVVRLVERAEKSLRDVSLDHRFGSNSSPGRISIRVLHPRGGEPWDGTRDRIAADIAAA 258
            LVPG MLT S     A+  FAEEV  +  E    R   A  IV EA  +V F  RR+ PRT +LVT+LQA VRGWLARRLAR ++LRGGCRRE+D  SGAW YVWS     P +P      P          G  YR      DGG   + +W PPA+LK+ESLPSPRAA RR E E RK+ A L    SLL+ QR  L  R AR   L+ L  VV+LVERA  SL + +L   FG+ S P  IS++VLHPRGGEP DG R+ +  +I +A
Sbjct:   93 LVPGAMLTFSNTAVAAVKAFAEEVLAE--EDPPRRATKAAAIVKEATTEVSFANRRNHPRTEVLVTRLQAVVRGWLARRLARVLLLRGGCRRELDVASGAWQYVWSHRAAVPGAPGAAATAPGRASYAGGIGGGGYRSPACGGDGGEGLFRTWYPPALLKNESLPSPRAAARRVEGEGRKREARLALANSLLDDQRAELNRRDARAARLLALVEVVKLVERAMASLEEAALTC-FGTGSEPLAISVKVLHPRGGEPGDGAREAVVTEIMSA 360
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig74869.15164.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KM98_9PHAE4.580e-6750.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1T7_ECTSI3.250e-6049.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 248..268
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 15..277
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..10
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..14
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 65..88
score: 7.95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig74869contigH-elongata_contig74869:821..2879 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig74869.15164.1mRNA_H-elongata_contig74869.15164.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig74869 809..2879 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig74869.15164.1 ID=prot_H-elongata_contig74869.15164.1|Name=mRNA_H-elongata_contig74869.15164.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=277bp
MLVPGVMLTISCRGAEAIMRFAEEVQQKDGEHVGGREKAALDIVAEAIMQ
VPFVTRRDGPRTGLLVTKLQATVRGWLARRLARSMILRGGCRREIDDRSG
AWVYVWSCDPASPENTTYPPTGSSYRESGEADGGVPYWSWRPPAVLKSES
LPSPRAARRRAETEERKKNATLTFFYSLLESQREYLCLRGAREESLVELA
AVVRLVERAEKSLRDVSLDHRFGSNSSPGRISIRVLHPRGGEPWDGTRDR
IAADIAAARKQKKEEKAKQKVRRPNFH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000048IQ_motif_EF-hand-BS