mRNA_H-elongata_contig74704.15148.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig74704.15148.1 vs. uniprot
Match: D7FLH8_ECTSI (FAM184 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLH8_ECTSI) HSP 1 Score: 98.2 bits (243), Expect = 2.220e-22 Identity = 48/65 (73.85%), Postives = 55/65 (84.62%), Query Frame = 1
Query: 1 RYENRPSRPEDVTRIRNLESEAIEREGIVTRVKDEVAFFRRELLNREENYNKKFNANPIVGVMQV 195
RYENRPSR EDV RIR LE +AIE + R ++E+AFF+RELLNREENYNKKFNANP+VGVMQV
Sbjct: 1028 RYENRPSREEDVKRIRQLEVDAIESRNVAARAREEMAFFKRELLNREENYNKKFNANPVVGVMQV 1092
BLAST of mRNA_H-elongata_contig74704.15148.1 vs. uniprot
Match: A0A6H5KR93_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR93_9PHAE) HSP 1 Score: 97.8 bits (242), Expect = 3.030e-22 Identity = 47/64 (73.44%), Postives = 55/64 (85.94%), Query Frame = 1
Query: 4 YENRPSRPEDVTRIRNLESEAIEREGIVTRVKDEVAFFRRELLNREENYNKKFNANPIVGVMQV 195
YENRPSR EDV RIR LE++AIE + R ++E+AFF+RELLNREENYNKKFNANP+VGVMQV
Sbjct: 1070 YENRPSREEDVKRIRQLEADAIESRNVAARAREEMAFFKRELLNREENYNKKFNANPVVGVMQV 1133
BLAST of mRNA_H-elongata_contig74704.15148.1 vs. uniprot
Match: A0A835ZEA9_9STRA (B30.2/SPRY domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEA9_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 3.730e-16 Identity = 41/65 (63.08%), Postives = 49/65 (75.38%), Query Frame = 1
Query: 1 RYENRPSRPEDVTRIRNLESEAIEREGIVTRVKDEVAFFRRELLNREENYNKKFNANPIVGVMQV 195
R+ +RPSR EDV RI LE E ER+ R +E A+F+RELLNREE YN+KFNANP+VGVMQV
Sbjct: 953 RFVDRPSRAEDVARIEALEGEVRERDARARRALEETAYFKRELLNREEMYNRKFNANPVVGVMQV 1017
BLAST of mRNA_H-elongata_contig74704.15148.1 vs. uniprot
Match: A0A7S2RG16_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RG16_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 1.440e-15 Identity = 37/65 (56.92%), Postives = 52/65 (80.00%), Query Frame = 1
Query: 1 RYENRPSRPEDVTRIRNLESEAIEREGIVTRVKDEVAFFRRELLNREENYNKKFNANPIVGVMQV 195
R+E R SRPED+ RI L ++ +E + +V + ++E+ +F+RELLNREEN+NKKFNA+P VGVMQV
Sbjct: 286 RWETRESRPEDLARIEELTNQMVEMDKLVKKTQEEMVYFKRELLNREENFNKKFNAHPNVGVMQV 350
BLAST of mRNA_H-elongata_contig74704.15148.1 vs. uniprot
Match: A0A7S0SRQ1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SRQ1_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 4.420e-15 Identity = 32/64 (50.00%), Postives = 49/64 (76.56%), Query Frame = 1
Query: 4 YENRPSRPEDVTRIRNLESEAIEREGIVTRVKDEVAFFRRELLNREENYNKKFNANPIVGVMQV 195
Y NR SR ED+ +I L ++ E+ ++ ++ DE+ +++REL+NRE+N+N KFNANP+VGVMQV
Sbjct: 1 YNNRESRNEDIEKINYLTNQVNEKNIMINKINDEMIYYKRELINREDNFNHKFNANPVVGVMQV 64
BLAST of mRNA_H-elongata_contig74704.15148.1 vs. uniprot
Match: K3WCF3_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WCF3_GLOUD) HSP 1 Score: 69.7 bits (169), Expect = 3.420e-13 Identity = 37/65 (56.92%), Postives = 45/65 (69.23%), Query Frame = 1
Query: 1 RYENRPSRPEDVTRIRNLESEAIEREGIVTRVKDEVAFFRRELLNREENYNKKFNANPIVGVMQV 195
RY R SR EDV+RI +LE +ERE +V + DE+ +F+RELLNREE YNK F P VGVM V
Sbjct: 43 RYARRESRLEDVSRIADLERAVVEREALVKQTLDEMVYFKRELLNREEMYNKTFARTPNVGVMNV 107
BLAST of mRNA_H-elongata_contig74704.15148.1 vs. uniprot
Match: G4Z9B1_PHYSP (FAM184 domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z9B1_PHYSP) HSP 1 Score: 72.0 bits (175), Expect = 3.560e-13 Identity = 37/65 (56.92%), Postives = 46/65 (70.77%), Query Frame = 1
Query: 1 RYENRPSRPEDVTRIRNLESEAIEREGIVTRVKDEVAFFRRELLNREENYNKKFNANPIVGVMQV 195
RY R SRPEDV RI LE +E++ +V R DE+A+F+RELLNREE YNK F P VG++QV
Sbjct: 967 RYARRESRPEDVARIVELERYVVEKDALVRRTLDEMAYFKRELLNREEMYNKTFARTPNVGMLQV 1031
BLAST of mRNA_H-elongata_contig74704.15148.1 vs. uniprot
Match: F0Y0J3_AURAN (FAM184 domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y0J3_AURAN) HSP 1 Score: 71.2 bits (173), Expect = 6.670e-13 Identity = 37/65 (56.92%), Postives = 49/65 (75.38%), Query Frame = 1
Query: 1 RYENRPSRPEDVTRIRNLESEAIEREGIVTRVKDEVAFFRRELLNREENYNKKFNANPIVGVMQV 195
+Y R SRPED+ +I +LESE +R + R+K E+A+F+ ELLNREEN+NKKF A+P VGVM V
Sbjct: 1315 KYAARESRPEDLEKIADLESENNQRAEDLARMKKEMAYFKNELLNREENFNKKFGASPNVGVMNV 1379
BLAST of mRNA_H-elongata_contig74704.15148.1 vs. uniprot
Match: D0NEP2_PHYIT (FAM184 domain-containing protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NEP2_PHYIT) HSP 1 Score: 70.9 bits (172), Expect = 9.090e-13 Identity = 37/65 (56.92%), Postives = 46/65 (70.77%), Query Frame = 1
Query: 1 RYENRPSRPEDVTRIRNLESEAIEREGIVTRVKDEVAFFRRELLNREENYNKKFNANPIVGVMQV 195
+Y R SRPEDV RI LE +ER+ +V + DE+A+F+RELLNREE YNK F P VGV+QV
Sbjct: 967 KYGRRESRPEDVARIVELERLVVERDALVRQTLDEMAYFKRELLNREEMYNKTFARTPNVGVLQV 1031
BLAST of mRNA_H-elongata_contig74704.15148.1 vs. uniprot
Match: A0A329RRT5_9STRA (FAM184 domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RRT5_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 1.240e-12 Identity = 36/65 (55.38%), Postives = 46/65 (70.77%), Query Frame = 1
Query: 1 RYENRPSRPEDVTRIRNLESEAIEREGIVTRVKDEVAFFRRELLNREENYNKKFNANPIVGVMQV 195
+Y R SRPEDV RI LE +E++ +V R DE+A+F+RELLNREE YNK F P VG++QV
Sbjct: 965 KYARRESRPEDVARIVELERLVVEKDALVRRTLDEMAYFKRELLNREEMYNKTFARTPNVGMLQV 1029 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig74704.15148.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig74704.15148.1 >prot_H-elongata_contig74704.15148.1 ID=prot_H-elongata_contig74704.15148.1|Name=mRNA_H-elongata_contig74704.15148.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=65bp RYENRPSRPEDVTRIRNLESEAIEREGIVTRVKDEVAFFRRELLNREENYback to top mRNA from alignment at H-elongata_contig74704:496..690+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig74704.15148.1 ID=mRNA_H-elongata_contig74704.15148.1|Name=mRNA_H-elongata_contig74704.15148.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=195bp|location=Sequence derived from alignment at H-elongata_contig74704:496..690+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig74704:496..690+ >mRNA_H-elongata_contig74704.15148.1 ID=mRNA_H-elongata_contig74704.15148.1|Name=mRNA_H-elongata_contig74704.15148.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=390bp|location=Sequence derived from alignment at H-elongata_contig74704:496..690+ (Himanthalia elongata Himel1 dioecious)back to top |