mRNA_H-elongata_contig7446.15132.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig7446.15132.1 vs. uniprot
Match: A0A6H5KVK1_9PHAE (Uncharacterized protein (Fragment) n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KVK1_9PHAE) HSP 1 Score: 323 bits (828), Expect = 1.750e-101 Identity = 175/291 (60.14%), Postives = 200/291 (68.73%), Query Frame = 1
Query: 1 FIKRGYGVVYLAREGCAAPFARRFQELVSDHIDLNTEDM---------------------------SGGTM-DVDERLVEALVAYKDAVDDDALLPIYFVTLEEYLWCLRTVSQLMDGMGRHGMLFLAAAVSDFYVPSERLREHKIEPTQAANGSV--GLALHLDGVRKCFDGVATVNYVKRKSQSPLSYRQVPKCLGMIGAEWATECFRVSFKLETDQERLLPKAKAALERYGMHVVVGNELHSRYDKVELVFPGGDVRTLRKAKGAERVVEEALVEALAQEHFNYIAEG 783
FI RGYGV+YL REGC+APFARRFQELVS+H+DL D SG T+ DVDERLVE LVAYKDAV+ ++LL I FV++EEYLWCLR VS+ MD MGRHGMLFLAAAVSDF++PS +LREHKI+ ++ G GL LHLD +VPKCLGMIG EWA +CFRVSFKLETD ERLLPKA+ AL+ YGMHVVVGNELHSRYDKVEL+FP G R + KA+G V+EEALVEALAQEHFNYIAEG
Sbjct: 86 FIARGYGVIYLGREGCSAPFARRFQELVSNHVDLKFMDKLVLGDTRRVELGTEAAASMAKDGIVSDSGETVTDVDERLVETLVAYKDAVESNSLLSISFVSVEEYLWCLRMVSRCMDRMGRHGMLFLAAAVSDFHIPSHKLREHKIDSSRGVRGDAASGLTLHLD--------------------------EVPKCLGMIGEEWAPDCFRVSFKLETDLERLLPKARVALKSYGMHVVVGNELHSRYDKVELIFPDGVERQINKARGVGHVIEEALVEALAQEHFNYIAEG 350
BLAST of mRNA_H-elongata_contig7446.15132.1 vs. uniprot
Match: A0A835ZD54_9STRA (DNA/pantothenate metabolism flavoprotein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD54_9STRA) HSP 1 Score: 204 bits (520), Expect = 1.240e-55 Identity = 120/275 (43.64%), Postives = 153/275 (55.64%), Query Frame = 1
Query: 1 FIKRGYGVVYLAREGCAAPFARRFQELVSDHIDLN----------------TEDMSGGTMDVDERLVEALVAYKDAVDDDALLPIYFVTLEEYLWCLRTVSQLMDGMGRHGMLFLAAAVSDFYVPSERLREHKIEPTQAANGSVGLALHLDGVRKCFDGVATVNYVKRKSQSPLSYRQVPKCLGMIGAEWATECFRVSFKLETDQERLLPKAKAALERYGMHVVVGNELHSRYDKVELVFPGGDVRTLRKAKGAERVVEEALVEALAQEHFNYIA 777
F+ GY V+YL R+GCAAP+AR + +S H+DL T DM G D DE LV ALVAY+ A DD ALL + F T+ EYLW LR +Q + +GRH M +LAAAVSDF++P + HK+ Q+ G+ GL L L GV PKCLG + A WA FRV+FKLETD LLPKA+AA+ R+G+H+VV NELHSRY V+++ D A+ +E LV +AQ HFNYIA
Sbjct: 98 FLALGYAVIYLHRKGCAAPYARVIADKLSPHVDLQLMDRLRLNPSRRLELTTGDMEAGREDADEALVGALVAYQAARDDRALLAVAFTTVHEYLWLLRLTAQHLRPLGRHAMAYLAAAVSDFHLPPAAIPRHKV---QSEGGAAGLELQLQGV--------------------------PKCLGALSAHWAPRAFRVAFKLETDAALLLPKARAAIARHGVHLVVANELHSRYRHVDII--SADAVLPIDRDDADTPIEVPLVAEIAQCHFNYIA 341
BLAST of mRNA_H-elongata_contig7446.15132.1 vs. uniprot
Match: A0A8K1FB34_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FB34_PYTOL) HSP 1 Score: 171 bits (432), Expect = 1.190e-43 Identity = 122/343 (35.57%), Postives = 177/343 (51.60%), Query Frame = 1
Query: 1 FIKRGYGVVYLAREGCAAPFARRFQELVSDHIDL-------------NTEDMSGGTMDVDERLVEALVAYKDAVDDDALLPIYFVTLEEYLWCLRTVSQLMDGMGRHGMLFLAAAVSDFYVPSERLREHKIEPTQAANGSVGLALHLDGVRKCFDGVATVNYVKRKSQSPLSYRQVPKCLGMIGAEWATECFRVSFKLETDQERLLPKAKAALERYGMHVVVGNELHSRYDKVELVFPGGDVRTLRKAKGAERVVEEALVEALAQEHFNYIAEGDSPSGQLPSKTLPSSPRRRPSWQEWLRWSPRAVMSVATLV-----LTAVLARQLKKHLVDILQEAFARR 975
F+ GY V+YL R G APFAR Q+ S +DL N E G D R+V L YK + +ALL + + ++++Y + LR +++ + + +LAAAVSDFYVP L EHKI Q+ +G + + L +QVPK LG++ +WA + F VSFKLETD + L KAK ++++YGMH+VV NELH+R+D+V L+ D RT+ + K AE + E +LVEA+A HF +IA D LPS RR W+ R PRA +VA + + AV+ L ++++LQ + RR
Sbjct: 82 FLSLGYAVIYLHRPGSVAPFARHVQKTTSKQLDLEFLESLRVTKSAQNVELQFEGEQDR-RRVVNMLQTYKSVREANALLALPYTSVDDYFFQLRLIAESVAPWKERALFYLAAAVSDFYVPQHELSEHKI---QSRDGPLTMTL----------------------------QQVPKLLGVMRHDWAPQAFFVSFKLETDWDLLRKKAKMSVDKYGMHLVVANELHTRFDEV-LLITDKDERTIERPKDAEDI-ENSLVEAIAGIHFKFIASRDVTVPDEIGHKLPSGGRR--PWRR--RLPPRAQSAVALIEQHQEEILAVVLGGLLSVMLNMLQNSMRRR 386
BLAST of mRNA_H-elongata_contig7446.15132.1 vs. uniprot
Match: K3X666_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X666_GLOUD) HSP 1 Score: 170 bits (431), Expect = 1.470e-43 Identity = 117/343 (34.11%), Postives = 175/343 (51.02%), Query Frame = 1
Query: 1 FIKRGYGVVYLAREGCAAPFARRFQELVSDHIDLNTED---MSGGTMDVD---------ERLVEALVAYKDAVDDDALLPIYFVTLEEYLWCLRTVSQLMDGMGRHGMLFLAAAVSDFYVPSERLREHKIEPTQAANGSVGLALHLDGVRKCFDGVATVNYVKRKSQSPLSYRQVPKCLGMIGAEWATECFRVSFKLETDQERLLPKAKAALERYGMHVVVGNELHSRYDKVELVFPGGDVRTLRKAKGAERVVEEALVEALAQEHFNYIAEGDSPSGQLPSKTLPSSPRRRPSWQEWLRWSPRAVMSVATLV------LTAVLARQLKKHLVDILQEAFARR 975
F++ GY V+YL R APFAR Q S H+DL D ++ + DV + +V+AL YK V+ ++LL + F +++EY + L+ +++ + + +LAAAVSDFY+P L EHKI+ R L+ +QVPK LG++ +WA + F VSFKLETD E L KAK ++ +YGMHVVV NEL SR+ +V L+ D R++ K K A+ + E ALV+A+A HF +IA D +P + P RR W R P V S ++V + AV+ + ++++LQ + RR
Sbjct: 79 FLRLGYAVIYLNRPTTIAPFARHVQRATSSHVDLKLLDYIEVAKSSQDVQLTFDDYLEKKSVVDALQQYKSVVESNSLLSLAFTSVDEYFFLLKLIAESVASWNERVLFYLAAAVSDFYIPQSELSEHKIQ-------------------------------SRAGPLTLTLQQVPKLLGVMRHDWAPKAFYVSFKLETDWEILREKAKQSIAKYGMHVVVANELKSRFHEV-LLITAADERSIDKPKDADDI-EGALVDAIASMHFKFIASNDV---SVPDEIGHRVPARR----AWRRRLPGKVQSALSVVEQHQEEILAVVLGGVLSVMLNMLQNSLRRR 381
BLAST of mRNA_H-elongata_contig7446.15132.1 vs. uniprot
Match: A0A1V9Z5M9_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z5M9_9STRA) HSP 1 Score: 170 bits (431), Expect = 1.610e-43 Identity = 117/331 (35.35%), Postives = 178/331 (53.78%), Query Frame = 1
Query: 4 IKRGYGVVYLAREGCAAPFARRFQELVSDHIDL---NTEDMS--GGTMDVDE-------RLVEALVAYKDAVDDDALLPIYFVTLEEYLWCLRTVSQLMDGMGRHGMLFLAAAVSDFYVPSERLREHKIEPTQAANGSVGLALHLDGVRKCFDGVATVNYVKRKSQSPLSYRQVPKCLGMIGAEWATECFRVSFKLETDQERLLPKAKAALERYGMHVVVGNELHSRYDKVELVFPGGDVRTLRKAKGAERVVEEALVEALAQEHFNYIAEGDSPSGQLPSKTLPSSPRRRP-SWQEWLRWSPRAVMSVATLVLTAVLARQLKKHLVDILQ 957
+K GY V++L R GC PFAR FQ+ +S ++DL N D++ G +M++ R ++AL +YK A+ L P+ FV+++EY + LR ++ + +G M +LAAAVSDFY+P + EHKI+ T A H D L+ + VPK LG++ EW+ E F VSFKLETD L KA +++ YGMH+VV NEL +R+ +V L+ GD T+ + + +E +L+ A+A HF Y+A + QLP K LP P R +W+ LR + +A ++ +T VL + L+ +LQ
Sbjct: 84 VKLGYAVIFLHRPGCVMPFARHFQKSMSHNMDLAFLNHVDVAKDGKSMEISSADRVQQARCIDALKSYKQAMQQTMLCPVAFVSVDEYFFALRAIAAAVKPLGERAMFYLAAAVSDFYIPVSEMVEHKIQSTPA---------HAD------------------DSLTLTLQHVPKLLGLLRYEWSPEAFYVSFKLETDVTILRQKALSSISNYGMHLVVANELKTRFHQVWLITGDGD--TVLEKPEDDPDIELSLLNAVADMHFTYLA---THHAQLP-KALPRVPVRSSYTWEAPLR-NIQATLNEHKAEITGVLLGGMISVLISMLQ 380
BLAST of mRNA_H-elongata_contig7446.15132.1 vs. uniprot
Match: A0A7S2XZH3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZH3_9STRA) HSP 1 Score: 168 bits (425), Expect = 2.880e-43 Identity = 112/278 (40.29%), Postives = 149/278 (53.60%), Query Frame = 1
Query: 1 FIKRGYGVVYLAREGCAAPFARRFQELVSDHIDL----NTE----------------------DMSGGTMDVDERLVEALVAYKDAVDDDALLPIYFVTLEEYLWCLRTVSQLMDGMGRHGMLFLAAAVSDFYVPSERLREHKIEPTQAANGSVGLALHLDGVRKCFDGVATVNYVKRKSQSPLSYRQVPKCLGMIGAEWATECFRVSFKLETDQERLLPKAKAALERYGMHVVVGNELHSRYDKVELVFPGGDVRTLRKAKGAERVVEEALVEALAQ 756
F++ GY VVYL R+GCAAPFAR QE V ++DL N E G D RL A+ Y A D+ LL + F T+++YLW LRTVS ++ +G H ML+LAAAVSDFY+P ++ HKI Q+ANG GL+L LD QVPKCLG+ EWA + VSFKLETD + L+ KA++A+E+Y +H+VV NEL SR KV LV + + K + + R +E LV A+A+
Sbjct: 83 FLELGYAVVYLHRQGCAAPFARVIQEEVGGNLDLKFMANVEVKAMASGGGGLAHRPGQVLLVPGSEEGREDATLRLTRAVQRYHQACRDNLLLAVPFQTVQDYLWGLRTVSMALNPLGTHAMLYLAAAVSDFYLPEAKMATHKI---QSANG--GLSLQLD--------------------------QVPKCLGLCREEWAPHAYLVSFKLETDPDILMIKARSAMEKYKVHLVVANELQSRRTKVVLVERQNMTQIVEK-RPSTRDIEGDLVRAVAE 328
BLAST of mRNA_H-elongata_contig7446.15132.1 vs. uniprot
Match: A0A1V9ZNI2_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZNI2_9STRA) HSP 1 Score: 170 bits (430), Expect = 2.790e-42 Identity = 115/338 (34.02%), Postives = 180/338 (53.25%), Query Frame = 1
Query: 1 FIKRGYGVVYLAREGCAAPFARRFQELVSDHID---LNTEDMS--GGTMDVDE-------RLVEALVAYKDAVDDDALLPIYFVTLEEYLWCLRTVSQLMDGMGRHGMLFLAAAVSDFYVPSERLREHKIEPTQAANGSVGLALHLDGVRKCFDGVATVNYVKRKSQSPLSYRQVPKCLGMIGAEWATECFRVSFKLETDQERLLPKAKAALERYGMHVVVGNELHSRYDKVELVFPGGDVRTLRKAKGAERVVEEALVEALAQEHFNYIAEGDS--PSGQLPSKTLPSSPRRRPSWQEWLRWSPRAVMSVATLVLTAVLARQLKKHLVDILQEAFAR 972
F+K GY V++L R GC PFAR FQ+ +S+++D LN D++ G TM++ R ++AL +YK A L P+ FV+++EY + LR ++ + + + +LAAAVSDFY+P + EHKI+ T + + GL L L + VPK LG++ EWA++ F VSFKLETD+ L KAK ++ YGMH+V+ NEL SR+ +V L+ D L + + +E +LV A+A H++++A+ + PS +K +PS +P W+ LR S R+ + + VL + L+ +LQ R
Sbjct: 127 FVKLGYAVIFLHRPGCVMPFARHFQKSMSNNMDWTFLNHVDVAKDGKTMELSSDDRVQQARCIDALKSYKQATQQTMLCPVTFVSVDEYFFFLRAIAAAVQPLDERALFYLAAAVSDFYIPEAEMVEHKIQSTPSLDDH-GLTLSL--------------------------KHVPKLLGLLRHEWASQAFYVSFKLETDETILRQKAKTSIANYGMHLVIANELKSRFKQVWLITD--DKEVLLEKPEDDPDIEVSLVNAVAAMHYSFLADHHAKLPSNLKAAKAIPSV---KP-WEATLR-SVRSTLDEHKAEIAGVLLGGMISVLISMLQRRVFR 430
BLAST of mRNA_H-elongata_contig7446.15132.1 vs. uniprot
Match: A0A5D6Y9Q3_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y9Q3_9STRA) HSP 1 Score: 167 bits (422), Expect = 3.290e-40 Identity = 121/343 (35.28%), Postives = 173/343 (50.44%), Query Frame = 1
Query: 1 FIKRGYGVVYLAREGCAAPFARRFQELVSDHIDLNTED---MSGGTMDVD---------ERLVEALVAYKDAVDDDALLPIYFVTLEEYLWCLRTVSQLMDGMGRHGMLFLAAAVSDFYVPSERLREHKIEPTQAANGSVGLALHLDGVRKCFDGVATVNYVKRKSQSPLSYRQVPKCLGMIGAEWATECFRVSFKLETDQERLLPKAKAALERYGMHVVVGNELHSRYDKVELVFPGGDVRTLRKAKGAERVVEEALVEALAQEHFNYIAEGDSPSGQLPSKTLPSSPRRRPSWQEWLRWSPRAVMSVATLV------LTAVLARQLKKHLVDILQEAFARR 975
F+ GY V+YL R APFAR Q+ S H+DL D +S DV +++V+AL YK A +ALL + F +++EY + LR +++ ++ + +LAAAVSDFY+P L EHKI Q+ +G + L L +QVPK LG++ WA + F VSFKLETD + L KAK ++ +YGMH VV NEL SR+ +V L+ D R L K K A+ + E ALV+A+A HF YIA D +P + P RR W R P + S +L + AV+ + ++++LQ RR
Sbjct: 385 FLSLGYAVIYLNRPTAIAPFARHLQKATSAHVDLALLDHVEVSKTAQDVQLVFDDFFDKKKVVDALQQYKAAAAANALLSLPFTSVDEYFFLLRLIAESVESWNERVLFYLAAAVSDFYIPQRELSEHKI---QSRDGPLTLTL----------------------------QQVPKLLGVLRHAWAPKAFYVSFKLETDFDILRQKAKQSIAKYGMHAVVANELQSRFREV-LLITASDERCLEKPKDADDI-EAALVDAVAGMHFKYIASNDV---SVPDEVGYRLPARR----AWRRRLPAKMQSALSLAEQHQEEILAVVLGGVLSVVLNMLQNTLRRR 687
BLAST of mRNA_H-elongata_contig7446.15132.1 vs. uniprot
Match: A8PRR8_MALGO (Uncharacterized protein n=1 Tax=Malassezia globosa (strain ATCC MYA-4612 / CBS 7966) TaxID=425265 RepID=A8PRR8_MALGO) HSP 1 Score: 155 bits (393), Expect = 7.550e-39 Identity = 102/276 (36.96%), Postives = 145/276 (52.54%), Query Frame = 1
Query: 1 FIKRGYGVVYLAREGCAAPFARRFQELVSDHIDLNTED-MSGGTMDVDE----RLVEALVAYKDAVDDDALLPIYFVTLEEYLWCLRTVSQLMDGMGRHGMLFLAAAVSDFYVPSERLREHKIEPTQAANGSVGLALHLDGVRKCFDGVATVNYVKRKSQSPLSYRQVPKCLGMIGAEWATECFRVSFKLETDQERLLPKAKAALERYGMHVVVGNELHSRYDKVELVFPGGDVRT-------------LRKAKGAERVVEEALVEALAQEHFNYI 774
F+K GY V++++R+ PF R + + DL E +GG++ V E RL+ L AY DA LL + FVT+ EYL+ LR +S M +GR ML+LAAAVSDF++P +R+ EHKI+ + A L + L+ QVPK LG++ EW E + VSFKLETD L+PK++ +L YG +V+GN LH R +V LV +RT +R G+ER +E+ +V ALAQ H +I
Sbjct: 77 FLKHGYAVIFMSRQHSQFPFTRSYSHTTNPLFDLLEEPGANGGSVRVCEDQVGRLLPILHAYHDAKKHGLLLTVPFVTVIEYLFLLRNISLAMASIGRQAMLYLAAAVSDFFMPEDRISEHKIQSSDHA-----LTIELE--------------------------QVPKVLGVLVQEWLPEAYIVSFKLETDDNLLVPKSERSLRNYGHQLVIGNHLHRRKWEVVLVEQTARMRTKTTDTTQPFEHTWIRLPPGSEREIEQDIVLALAQRHIGWI 321
BLAST of mRNA_H-elongata_contig7446.15132.1 vs. uniprot
Match: F0WIF8_9STRA (Uncharacterized protein AlNc14C110G6358 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WIF8_9STRA) HSP 1 Score: 155 bits (392), Expect = 4.270e-38 Identity = 110/314 (35.03%), Postives = 169/314 (53.82%), Query Frame = 1
Query: 4 IKRGYGVVYLAREGCAAPFARRFQELVSDHIDL--------NTEDMSGGTMDVDER----LVEALVA-YKDAVDDDALLPIYFVTLEEYLWCLRTVSQLMDGMGRHGMLFLAAAVSDFYVPSERLREHKIEPTQAANGSVGLALHLDGVRKCFDGVATVNYVKRKSQSPLSYRQVPKCLGMIGAEWATECFRVSFKLETDQERLLPKAKAALERYGMHVVVGNELHSRYDKVELVFPGGDVRTLRKAKGAERVVEEALVEALAQEHFNYIAEGDSPSGQLPSKTLPSSPRRRPSWQEWLR-WSPRAVMSVATLV 903
+K GY V+YL R G APFAR F S+H+DL + E ++ ++ LVE V Y+++V ++ +L + F T+++YL+ LR VS+L+ + +L+AAVSDFY+P+ L EHK+E ++ GS+ L L PK LG++ EWA F VSFKLET+ +RLL KA+ ++E+YGMHVVV NEL SRY +V LV R +R + + ++ +LV+A+ HF YIA + S PSK + + + + W R ++P ++++ TLV
Sbjct: 77 LKLGYAVIYLYRPGSIAPFARHFPNEFSNHLDLYFMKHLSIDEEPQYKVSLSLENEELHHLVEKAVRPYQESVRNNNILALSFETVDDYLFSLRLVSELVKPWRERVLFYLSAAVSDFYIPNAELTEHKME---SSTGSLKLEL----------------------------LPTPKMLGVLRNEWAPNAFFVSFKLETNWDRLLKKARLSVEKYGMHVVVANELKSRYHEVLLVSKNEARRLIRPNEQTD--IDASLVDAVVSMHFKYIA---THSVSFPSK-MGAHVHKYSRFHAWKRRYTPTQIVALMTLV 353 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7446.15132.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig7446.15132.1 >prot_H-elongata_contig7446.15132.1 ID=prot_H-elongata_contig7446.15132.1|Name=mRNA_H-elongata_contig7446.15132.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=305bp MSGGTMDVDERLVEALVAYKDAVDDDALLPIYFVTLEEYLWCLRTVSQLMback to top mRNA from alignment at H-elongata_contig7446:6001..9506+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig7446.15132.1 ID=mRNA_H-elongata_contig7446.15132.1|Name=mRNA_H-elongata_contig7446.15132.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3506bp|location=Sequence derived from alignment at H-elongata_contig7446:6001..9506+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig7446:6001..9506+ >mRNA_H-elongata_contig7446.15132.1 ID=mRNA_H-elongata_contig7446.15132.1|Name=mRNA_H-elongata_contig7446.15132.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1830bp|location=Sequence derived from alignment at H-elongata_contig7446:6001..9506+ (Himanthalia elongata Himel1 dioecious)back to top |