prot_H-elongata_contig74064.15097.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig74064.15097.1
Unique Nameprot_H-elongata_contig74064.15097.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length85
Homology
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BLAST of mRNA_H-elongata_contig74064.15097.1 vs. uniprot
Match: D8LNQ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNQ5_ECTSI)

HSP 1 Score: 52.8 bits (125), Expect = 1.980e-6
Identity = 25/44 (56.82%), Postives = 35/44 (79.55%), Query Frame = 0 
Query:   36 KADLIASVNMEQAFERQKERAAAGDDVPYVLARTLRSNIQYNAA 79
            +A +IA V+++   +RQK R + GD+VPYVLART+RSN+QY AA
Sbjct:  103 QAHIIAGVSIQHVLDRQKARDSEGDNVPYVLARTVRSNLQYLAA 146
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig74064.15097.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LNQ5_ECTSI1.980e-656.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig74064contigH-elongata_contig74064:2334..3006 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig74064.15097.1mRNA_H-elongata_contig74064.15097.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig74064 2334..3008 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig74064.15097.1 ID=prot_H-elongata_contig74064.15097.1|Name=mRNA_H-elongata_contig74064.15097.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=85bp
SEGKRLSSLSRADTRPPCLVGTRSIPICTPPAVALKADLIASVNMEQAFE
RQKERAAAGDDVPYVLARTLRSNIQYNAAIALKAK
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