prot_H-elongata_contig73928.15082.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig73928.15082.1
Unique Nameprot_H-elongata_contig73928.15082.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length59
Homology
BLAST of mRNA_H-elongata_contig73928.15082.1 vs. uniprot
Match: UPI001659326E (leucine-rich repeat domain-containing protein n=1 Tax=Flavobacterium johnsoniae TaxID=986 RepID=UPI001659326E)

HSP 1 Score: 60.1 bits (144), Expect = 4.440e-9
Identity = 28/61 (45.90%), Postives = 39/61 (63.93%), Query Frame = 0
Query:    1 DEDALLKIYDSLGGSFWTNNSGWCTNASLADW--------HGVDIKDNYVSGLDLGSNNLT 53
            ++DALL IY+SLGGS W NN+GW  +  +A W        +GV ++DN+V  LDL  N L+
Sbjct:  102 EKDALLAIYNSLGGSGWINNTGWNASNPVASWDEQTGTGWYGVTVEDNHVVRLDLNYNRLS 162          
BLAST of mRNA_H-elongata_contig73928.15082.1 vs. uniprot
Match: UPI0007FB3066 (PL29 family lyase N-terminal domain-containing protein n=1 Tax=Butyricimonas TaxID=574697 RepID=UPI0007FB3066)

HSP 1 Score: 59.3 bits (142), Expect = 8.300e-9
Identity = 22/57 (38.60%), Postives = 40/57 (70.18%), Query Frame = 0
Query:    1 DEDALLKIYDSLGGSFWTNNSGWCTNASLADWHGVDI-KDNYVSGLDLGSNNLTGEL 56
            + +AL+ +Y++  G+ WT  + W ++  +++WHG++  KD  +  +DLGSNNL+GEL
Sbjct:  542 EREALMDLYNATNGTSWTKQTNWGSDKPVSEWHGINCRKDGTIYEIDLGSNNLSGEL 598          
BLAST of mRNA_H-elongata_contig73928.15082.1 vs. uniprot
Match: A0A3B0BVE1_9FLAO (Uncharacterized protein n=2 Tax=Ulvibacterium marinum TaxID=2419782 RepID=A0A3B0BVE1_9FLAO)

HSP 1 Score: 59.3 bits (142), Expect = 8.350e-9
Identity = 23/57 (40.35%), Postives = 38/57 (66.67%), Query Frame = 0
Query:    1 DEDALLKIYDSLGGSFWTNNSGWCTNASLADWHGVDIKDN-YVSGLDLGSNNLTGEL 56
            +  AL+ +++++GG+ WT N+GW T+A + DW G+   D  +V G+DL  N L GE+
Sbjct: 2658 ERQALIDLFEAMGGTNWTTNTGWNTDAPVCDWFGITTDDEAHVIGVDLPDNGLRGEI 2714          
BLAST of mRNA_H-elongata_contig73928.15082.1 vs. uniprot
Match: A0A7X3WZA7_9BACT (Uncharacterized protein n=2 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7X3WZA7_9BACT)

HSP 1 Score: 57.4 bits (137), Expect = 3.980e-8
Identity = 21/55 (38.18%), Postives = 36/55 (65.45%), Query Frame = 0
Query:    2 EDALLKIYDSLGGSFWTNNSGWCTNASLADWHGVDIKDNYVSGLDLGSNNLTGEL 56
            ++     Y++ GGS WT++S W T+A ++ W GV ++D+ V+ L+L  N L+G L
Sbjct: 1022 QEVFAAFYEATGGSSWTSDSNWLTDAPVSSWFGVTVEDSLVTALELPGNGLSGML 1076          
BLAST of mRNA_H-elongata_contig73928.15082.1 vs. uniprot
Match: UPI001AAD6A5E (T9SS type A sorting domain-containing protein n=1 Tax=Winogradskyella sp. DF17 TaxID=2819984 RepID=UPI001AAD6A5E)

HSP 1 Score: 56.6 bits (135), Expect = 7.340e-8
Identity = 28/58 (48.28%), Postives = 38/58 (65.52%), Query Frame = 0
Query:    1 DEDALLKIYDSLGGSFWTNNSGWC-TNASLADWHGVDIKDN-YVSGLDLGSNNLTGEL 56
            D   LL +Y+SLGG+ W++N  W  T+  +A W GV + DN  V GL+L +NNLTG L
Sbjct:  271 DYSNLLDVYNSLGGTNWSDNVNWLDTSLPIAMWTGVSLSDNGSVGGLNLPNNNLTGNL 328          
BLAST of mRNA_H-elongata_contig73928.15082.1 vs. uniprot
Match: A0A7X4EDX9_9BACT (Uncharacterized protein n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7X4EDX9_9BACT)

HSP 1 Score: 56.2 bits (134), Expect = 1.020e-7
Identity = 22/56 (39.29%), Postives = 34/56 (60.71%), Query Frame = 0
Query:    1 DEDALLKIYDSLGGSFWTNNSGWCTNASLADWHGVDIKDNYVSGLDLGSNNLTGEL 56
            D  AL  +Y +  G  W +N+ W ++  L +W+GVD+ D  V  L+LG NNL G++
Sbjct:  953 DRAALEALYHATRGDDWKDNTNWLSDEPLEEWYGVDVADGRVDHLNLGKNNLDGQI 1008          
BLAST of mRNA_H-elongata_contig73928.15082.1 vs. uniprot
Match: A0A6I2MK65_9FLAO (Uncharacterized protein n=2 Tax=Maribacter luteus TaxID=2594478 RepID=A0A6I2MK65_9FLAO)

HSP 1 Score: 55.8 bits (133), Expect = 1.240e-7
Identity = 23/56 (41.07%), Postives = 38/56 (67.86%), Query Frame = 0
Query:    1 DEDALLKIYDSLGGSFWTNNSGWCTNASLADWHGVDIKDNYVSGLDLGSNNLTGEL 56
            +++ LL++Y +  G  WT    W  N  ++ WHGV++KD++V GL+L +NNL G+L
Sbjct:   34 EKEVLLELYRNTHGENWT--IPWSLNKPVSKWHGVEVKDDHVVGLNLFNNNLVGQL 87          
BLAST of mRNA_H-elongata_contig73928.15082.1 vs. uniprot
Match: A0A7X3R7H5_9BACT (BIG2 domain-containing protein n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7X3R7H5_9BACT)

HSP 1 Score: 55.8 bits (133), Expect = 1.360e-7
Identity = 24/57 (42.11%), Postives = 35/57 (61.40%), Query Frame = 0
Query:    1 DEDALLKIYDSLGGSFWTNNSGWCTNASLADWHGVDIK-DNYVSGLDLGSNNLTGEL 56
            D   L+ +Y++L G  W   + W ++  L  WHGV +  D  V+GLDL SN+L+GEL
Sbjct:  121 DRAVLVAVYNALRGRVWMKKTNWLSSLPLGAWHGVTVNPDGRVTGLDLQSNSLSGEL 177          
BLAST of mRNA_H-elongata_contig73928.15082.1 vs. uniprot
Match: UPI001FCB66A0 (Two component regulator three Y domain protein n=1 Tax=Flavobacterium fluviatile TaxID=1862387 RepID=UPI001FCB66A0)

HSP 1 Score: 54.3 bits (129), Expect = 2.520e-7
Identity = 25/56 (44.64%), Postives = 35/56 (62.50%), Query Frame = 0
Query:    1 DEDALLKIYDSLGGSFWTNNSGWCTNASLADWHGVDIKDNYVSGLDLGSNNLTGEL 56
            ++DALLK+Y +  G  WT    W    S++ WHGV+I +  V GL+L  NNL G+L
Sbjct:   16 EKDALLKLYHTTKGEEWTIK--WDLALSVSTWHGVEISNGKVVGLNLAGNNLKGQL 69          
BLAST of mRNA_H-elongata_contig73928.15082.1 vs. uniprot
Match: A0A2G6THC0_9FLAO (Leucine rich repeat (LRR) protein n=2 Tax=unclassified Flavobacterium TaxID=196869 RepID=A0A2G6THC0_9FLAO)

HSP 1 Score: 53.5 bits (127), Expect = 7.980e-7
Identity = 23/56 (41.07%), Postives = 37/56 (66.07%), Query Frame = 0
Query:    1 DEDALLKIYDSLGGSFWTNNSGWCTNASLADWHGVDIKDNYVSGLDLGSNNLTGEL 56
            ++DAL+K+Y +  GS W     W  + S++ W+GV +K+  V+ L+LG NNL G+L
Sbjct:   26 EKDALIKLYYATNGSQWKIK--WDLSLSVSTWYGVQVKNGKVTALNLGDNNLEGQL 79          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig73928.15082.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001659326E4.440e-945.90leucine-rich repeat domain-containing protein n=1 ... [more]
UPI0007FB30668.300e-938.60PL29 family lyase N-terminal domain-containing pro... [more]
A0A3B0BVE1_9FLAO8.350e-940.35Uncharacterized protein n=2 Tax=Ulvibacterium mari... [more]
A0A7X3WZA7_9BACT3.980e-838.18Uncharacterized protein n=2 Tax=Gemmatimonadetes b... [more]
UPI001AAD6A5E7.340e-848.28T9SS type A sorting domain-containing protein n=1 ... [more]
A0A7X4EDX9_9BACT1.020e-739.29Uncharacterized protein n=1 Tax=Gemmatimonadetes b... [more]
A0A6I2MK65_9FLAO1.240e-741.07Uncharacterized protein n=2 Tax=Maribacter luteus ... [more]
A0A7X3R7H5_9BACT1.360e-742.11BIG2 domain-containing protein n=1 Tax=Gemmatimona... [more]
UPI001FCB66A02.520e-744.64Two component regulator three Y domain protein n=1... [more]
A0A2G6THC0_9FLAO7.980e-741.07Leucine rich repeat (LRR) protein n=2 Tax=unclassi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..57
e-value: 5.1E-11
score: 43.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig73928contigH-elongata_contig73928:2691..2867 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig73928.15082.1mRNA_H-elongata_contig73928.15082.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig73928 2691..2867 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig73928.15082.1 ID=prot_H-elongata_contig73928.15082.1|Name=mRNA_H-elongata_contig73928.15082.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=59bp
DEDALLKIYDSLGGSFWTNNSGWCTNASLADWHGVDIKDNYVSGLDLGSN
NLTGELRG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf