prot_H-elongata_contig73780.15071.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig73780.15071.1
Unique Nameprot_H-elongata_contig73780.15071.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length187
Homology
BLAST of mRNA_H-elongata_contig73780.15071.1 vs. uniprot
Match: A0A6H5JJV8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV8_9PHAE)

HSP 1 Score: 186 bits (472), Expect = 2.110e-53
Identity = 95/188 (50.53%), Postives = 128/188 (68.09%), Query Frame = 0
Query:    1 GSTTEEDLAASIEVMVKTHGLTGRVVVGNKDCEPSMVKAGRILTNKRVFTDVGCTCHRIECVTALVFDGPGVKKSMALARSLVTRYTKSSQAADRLQKLCGTVGIPPLRVMQDVETRWWSTHSVAERLVYLRRAVELLESLDNIAPLLGPVDWTVLEMLEPVISPFMYVQKELE-SNNVTGSLVVPLI 187
            G TT EDL  +++ M+  +GLT R V    DCEPSMVKAGR+L      T +GC CHR+E +T+  F GPGV K++ALAR +VTRY  SSQA+DRL+++   V +   +V+QDVETRWWST++   RL+ LRR +   E +D+I PLL   DW VL+++EP+  PF+  QK  E S +VT SLV+P I
Sbjct:   91 GRTTGEDLVEAVKAMIARNGLTSRTVATTTDCEPSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARRVVTRYNMSSQASDRLEQMRDIVQVERKKVVQDVETRWWSTYASICRLLSLRRPITEHERIDSIPPLLKEKDWEVLQVVEPLSKPFILSQKHREASKDVTVSLVIPYI 278          
BLAST of mRNA_H-elongata_contig73780.15071.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI)

HSP 1 Score: 186 bits (471), Expect = 1.210e-52
Identity = 96/186 (51.61%), Postives = 132/186 (70.97%), Query Frame = 0
Query:    1 GSTTEEDLAASIEVMVKTHGLTGRVVVGNKDCEPSMVKAGRIL-TNKRVFTDVGCTCHRIECVTALVFDGPGVKKSMALARSLVTRYTKSSQAADRLQKLCGTVGIPPLRVMQDVETRWWSTHSVAERLVYLRRAVELLESLDNIAPLLGPVDWTVLEMLEPVISPFMYVQKELE-SNNVTGSLVV 184
            G+TT EDLAA +  MV+ H LTGRV+    DCEPSM+KAGR+L  +    + +GC+ HR+E  T+ VF+G  +  ++ LAR+LV RY KSSQ A RL +LCG + + PL VMQDVETRWWST ++  RL+YL +A++L ES+D + PLL   DW VL ++EP++ PFM  QK+LE +  VTGS+ +
Sbjct:   82 GTTTGEDLAALVAGMVERHDLTGRVIACVTDCEPSMIKAGRLLEVDGSTISHIGCSNHRMESTTSSVFNGRSLG-ALGLARTLVGRYKKSSQMAARLVQLCGILQMEPLSVMQDVETRWWSTWAMVVRLLYLMKAIKLHESMDEVHPLLSDTDWEVLRLIEPILRPFMKAQKDLEGAQYVTGSMTI 266          
BLAST of mRNA_H-elongata_contig73780.15071.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE)

HSP 1 Score: 180 bits (457), Expect = 9.720e-51
Identity = 96/189 (50.79%), Postives = 129/189 (68.25%), Query Frame = 0
Query:    1 GSTTEEDLAASIEVMVKTHGLTGRVVVGNKDCEPSMVKAGRIL-TNKRVFTDVGCTCHRIECVTALVFDGPGVKKSMALARSLVTRYTKSSQAADRLQKLCGTVGIPPLRVMQDVETRWWSTHSVAERLVYLRRAVELLESLDNIAPLLGPVDWTVLEMLEPVISPFMYVQKELE-SNNVTGSLVVPLI 187
            GST  EDLA  I  M++ HGLTGRV     DCEPSMVKAGR+L         +GC+ HR+E  T+ VF+G  +  ++A AR++V RY +SSQ + RL    G + + PL V+QDVETRWWS+ ++ ERL+YL +A++L ES DNIAP+L   DW VL ++EP++ PFM  QK+LE +  VTGS+ VP I
Sbjct:  118 GSTHGEDLAREITSMIERHGLTGRVTACVTDCEPSMVKAGRLLEVGGSNLEHIGCSNHRMESTTSSVFNGKSLG-ALAKARAVVGRYKRSSQMSGRLAVFIGILKLSPLSVLQDVETRWWSSWAMIERLLYLMKAIKLHESTDNIAPVLSETDWEVLRLIEPILRPFMQAQKDLEGAKYVTGSMTVPKI 305          
BLAST of mRNA_H-elongata_contig73780.15071.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE)

HSP 1 Score: 181 bits (459), Expect = 1.670e-49
Identity = 94/186 (50.54%), Postives = 123/186 (66.13%), Query Frame = 0
Query:    3 TTEEDLAASIEVMVKTHGLTGRVVVGNKDCEPSMVKAGRILTNKRVFTDVGCTCHRIECVTALVFDGPGVKKSMALARSLVTRYTKSSQAADRLQKLCGTVGIPPLRVMQDVETRWWSTHSVAERLVYLRRAVELLESLDNIAPLLGPVDWTVLEMLEPVISPFMYVQKELE-SNNVTGSLVVPLI 187
            T  EDL  +++ M+  +GLTGR V    DCE SMVKAGR+L      T +GC CHR+E +T+  F GPGV K++ALAR +VTRYT SSQA+DRL+++C  V +    V+QDVETRWWST+    RL+ LRR +   E +D+  PLL   DW VL+++E ++ PFM  QK LE S  VT  LV P I
Sbjct:   49 TAGEDLVEAVKAMIARNGLTGRTVAITTDCELSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARGVVTRYTISSQASDRLEQVCDIVQVERKNVVQDVETRWWSTYVSICRLISLRRPITEHEIIDSTPPLLKEKDWEVLQLVESLLKPFMTAQKHLEASKEVTVRLVSPYI 234          
BLAST of mRNA_H-elongata_contig73780.15071.1 vs. uniprot
Match: A0A6H5KVI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI1_9PHAE)

HSP 1 Score: 171 bits (433), Expect = 1.490e-48
Identity = 89/188 (47.34%), Postives = 117/188 (62.23%), Query Frame = 0
Query:    1 GSTTEEDLAASIEVMVKTHGLTGRVVVGNKDCEPSMVKAGRILTNKRVFTDVGCTCHRIECVTALVFDGPGVKKSMALARSLVTRYTKSSQAADRLQKLCGTVGIPPLRVMQDVETRWWSTHSVAERLVYLRRAVELLESLDNIAPLLGPVDWTVLEMLEPVISPFMYVQKELE-SNNVTGSLVVPLI 187
            G TT EDL  +++ M+  +GLTGR V    DCEP MVKAGR+L      + +GC CHR E +T+  F GPGV K++AL R +VTRYT SSQA++RL+++C  V +   +V+QDVETRWWST                   +D+I PLL   DW VL+++EP++ PFM  QK LE S  VT SLV   I
Sbjct:   35 GRTTGEDLVEAVKAMIARNGLTGRTVATTTDCEPFMVKAGRLLEENEGVSHLGCFCHRFESITSQAFGGPGVSKALALPRGVVTRYTMSSQASNRLEQMCDIVQVERKKVVQDVETRWWSTP----------------REIDSIPPLLNEKDWEVLQLVEPLLHPFMTAQKHLEASKGVTVSLVTAYI 206          
BLAST of mRNA_H-elongata_contig73780.15071.1 vs. uniprot
Match: A0A6H5L7Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Y8_9PHAE)

HSP 1 Score: 115 bits (287), Expect = 2.500e-26
Identity = 63/118 (53.39%), Postives = 81/118 (68.64%), Query Frame = 0
Query:    1 GSTTEEDLAASIEVMVKTHGLTGRVVVGNKDCEPSMVKAGRILT-NKRVFTDVGCTCHRIECVTALVFDGPGVKKSMALARSLVTRYTKSSQAADRLQKLCGT-VGIPPLRVMQDVET 116
            G+TT + LAA I+  V  HGLTG+V     DCEPSMVK GR+L  +  V T +GC  +R+E  +++VF+GP VKK M LAR LVTRY  SSQAADRL++   T +G+   RV+QDV T
Sbjct:   82 GTTTGDALAAGIKATVAKHGLTGKVTAVTTDCEPSMVKMGRLLAGDATVSTQIGCCNYRLESTSSIVFNGPRVKKVMVLARGLVTRYPTSSQAADRLKQFVKTYLGVDNKRVIQDVVT 199          
BLAST of mRNA_H-elongata_contig73780.15071.1 vs. uniprot
Match: A0A498MJP0_LABRO (Zinc finger BED domain-containing 6-like isoform X2 n=2 Tax=Labeo rohita TaxID=84645 RepID=A0A498MJP0_LABRO)

HSP 1 Score: 73.9 bits (180), Expect = 1.360e-12
Identity = 54/189 (28.57%), Postives = 93/189 (49.21%), Query Frame = 0
Query:    2 STTEEDLAASIEVMVKTHGLTGRVVVGNKDCEPSMVKAGRILTNKRVFTDVGCTCHRIECVTALVFDGPGVKKSM-ALARSLVTRYTKSSQAADRLQKLCGTVGIPPLRVMQDVETRWWSTHSVAERLVYLRRAV-ELLESLDNIAPLLGPVDWTVLEMLEPVISPFMYVQKELESNN-VTGSLVVPLI 187
            S T +++  ++  ++   GLTG V     D   +MV A      K     + C  H I  +     +   V   + + AR +V+ +  S++A ++L      +G  PL+++Q+V+TRW STH + +RL+ LR  V   L SL N    L   D+ ++     V++PF Y  +EL     V+ S ++P+I
Sbjct:   14 SHTADNIKEALLELISDWGLTGSVAAMVTDNAANMVSA----IQKLGLRHLPCFAHTINLIVKRAVEEHEVMADIRSRARRVVSYFRSSTKATEKLILAQERMGRQPLKLLQEVDTRWNSTHDMLQRLIDLREPVGAALASLSNDIMPLSSADFDIISESLEVLAPFKYATEELSGEKRVSASKIIPII 198          
BLAST of mRNA_H-elongata_contig73780.15071.1 vs. uniprot
Match: A0A224XKI7_9HEMI (Putative hat-25 zm (Fragment) n=1 Tax=Panstrongylus lignarius TaxID=156445 RepID=A0A224XKI7_9HEMI)

HSP 1 Score: 72.8 bits (177), Expect = 1.190e-11
Identity = 45/183 (24.59%), Postives = 93/183 (50.82%), Query Frame = 0
Query:    6 EDLAASIEVMVKTHGLTGRVVVGNKDCEPSMVKAGRILTNKRVFTDVGCTCHRIECVTALVFDGPGVKKSMALARSLVTRYTKSSQAADRLQKLCGTVGIPPLRVMQDVETRWWSTHSVAERLVYLRRAVE-LLESLDNIAPLLGPVDWTVLEMLEPVISPFMYVQKELESNNV-TGSLVVPL 186
            ED+A +++ + +  G+  ++++   D   +M KA + L   + F   GC  H I  +         ++  +   + +V  + +S  A ++L +   T    PL+++Q+V+TRW ST+ + ER V L  A++  +  +D   P L   +W +L+ +  ++ P+  V K +  +   T ++V+PL
Sbjct:  229 EDIAGTLKRITQYWGIDQKIILAVSDNASNMQKAIQQLLEWKHF---GCFAHTINLIVKDALKCKDIQAIVEKVKRIVEYFRRSCTATEKLSRYQATSRNTPLKLIQEVQTRWNSTYYMLERFVSLEEAIKSTMAIIDKDLPKLNFEEWKILKEMCQILKPYENVTKAISGDKYCTAAIVIPL 408          
BLAST of mRNA_H-elongata_contig73780.15071.1 vs. uniprot
Match: A0A6V7VT18_9BILA (Hypothetical protein n=1 Tax=Meloidogyne enterolobii TaxID=390850 RepID=A0A6V7VT18_9BILA)

HSP 1 Score: 67.8 bits (164), Expect = 2.170e-10
Identity = 43/151 (28.48%), Postives = 78/151 (51.66%), Query Frame = 0
Query:   46 KRVFTDVG-----CTCHRIE-CVTALVF----DGPGVKKSMALARSLVTRYTKSSQAADRLQKLCGTVGIPPLRVMQDVETRWWSTHSVAERLVYLRRAVELLESLDNIAPLLGPVDWTVLEMLEPVISPFMYVQKELESNNVTGSLVVPL 186
            KRV TD+G     C  H ++ CV A +     D P +   +  A+  V +  KS   ++  ++L   + +P L + +D+E RW ST  + +RL+ +RR ++LL   +NI P     DW  L  ++ ++       K L++  V+ S+++P+
Sbjct:    2 KRVTTDLGFKSQDCLAHVLQLCVKAGISLFNNDEPELSNLIERAKRFVRKIKKSRVLSEEFKELQAALELPSLSLQKDIEVRWNSTFEMIDRLIKIRRVIDLLCDRNNI-PSFSNTDWLSLGSIKKLLQSVYDATKLLQNQTVSISVIIPI 151          
BLAST of mRNA_H-elongata_contig73780.15071.1 vs. uniprot
Match: UPI001F088102 (zinc finger BED domain-containing protein 4-like n=1 Tax=Hypomesus transpacificus TaxID=137520 RepID=UPI001F088102)

HSP 1 Score: 68.6 bits (166), Expect = 3.040e-10
Identity = 57/188 (30.32%), Postives = 90/188 (47.87%), Query Frame = 0
Query:    4 TEEDLAASIEVMVKTHGLTGRVVVGNKDCEPSMVKAGRILTNKRVFTDVGCTCHRIECVTALVFD-GPGVKKSMALARSLVTRYTKSSQAADRLQKLCGTVGIPPLRVMQDVETRWWSTHSVAERLVYLRRAV-ELLESLDNIAPLLGPVDW-TVLEMLEPVISPFMYVQKEL-ESNNVTGSLVVPLI 187
            T E +  +  V+++  GL  +V     D   +M+   ++L  + V     C  H +  V     +  P ++      R +V  +  S+ A +RL    G +GIP L+++Q+VETRW ST    ER+   R AV   L SL    P L   +  TV E LE ++ PF +   EL E   V+ S V+P++
Sbjct:   54 TAEHIKEAKNVLLEEWGLKDKVHCLITDNASNMILCAKLLKMRHV----PCFAHTLNLVVKKALEVTPEIQDIRTRTRRIVAFFKSSTNAKERLSVTQGQLGIPTLKLVQEVETRWNSTFQKLERMYEQRLAVGAALGSLTMDIPALSTTELQTVSECLE-ILGPFNHANVELSEEKRVSSSKVIPIL 236          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig73780.15071.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JJV8_9PHAE2.110e-5350.53Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
D8LCS5_ECTSI1.210e-5251.61Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ec... [more]
A0A6H5KUY5_9PHAE9.720e-5150.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHP9_9PHAE1.670e-4950.54Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 13... [more]
A0A6H5KVI1_9PHAE1.490e-4847.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L7Y8_9PHAE2.500e-2653.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A498MJP0_LABRO1.360e-1228.57Zinc finger BED domain-containing 6-like isoform X... [more]
A0A224XKI7_9HEMI1.190e-1124.59Putative hat-25 zm (Fragment) n=1 Tax=Panstrongylu... [more]
A0A6V7VT18_9BILA2.170e-1028.48Hypothetical protein n=1 Tax=Meloidogyne enterolob... [more]
UPI001F0881023.040e-1030.32zinc finger BED domain-containing protein 4-like n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR46169FAMILY NOT NAMEDcoord: 4..187
NoneNo IPR availablePANTHERPTHR46169:SF3coord: 4..187
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 4..186

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig73780contigH-elongata_contig73780:719..1279 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig73780.15071.1mRNA_H-elongata_contig73780.15071.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig73780 719..1279 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig73780.15071.1 ID=prot_H-elongata_contig73780.15071.1|Name=mRNA_H-elongata_contig73780.15071.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=187bp
GSTTEEDLAASIEVMVKTHGLTGRVVVGNKDCEPSMVKAGRILTNKRVFT
DVGCTCHRIECVTALVFDGPGVKKSMALARSLVTRYTKSSQAADRLQKLC
GTVGIPPLRVMQDVETRWWSTHSVAERLVYLRRAVELLESLDNIAPLLGP
VDWTVLEMLEPVISPFMYVQKELESNNVTGSLVVPLI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf