mRNA_H-elongata_contig73780.15071.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig73780.15071.1 vs. uniprot
Match: A0A6H5JJV8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV8_9PHAE) HSP 1 Score: 186 bits (472), Expect = 2.110e-53 Identity = 95/188 (50.53%), Postives = 128/188 (68.09%), Query Frame = 1
Query: 1 GSTTEEDLAASIEVMVKTHGLTGRVVVGNKDCEPSMVKAGRILTNKRVFTDVGCTCHRIECVTALVFDGPGVKKSMALARSLVTRYTKSSQAADRLQKLCGTVGIPPLRVMQDVETRWWSTHSVAERLVYLRRAVELLESLDNIAPLLGPVDWTVLEMLEPVISPFMYVQKELE-SNNVTGSLVVPLI 561
G TT EDL +++ M+ +GLT R V DCEPSMVKAGR+L T +GC CHR+E +T+ F GPGV K++ALAR +VTRY SSQA+DRL+++ V + +V+QDVETRWWST++ RL+ LRR + E +D+I PLL DW VL+++EP+ PF+ QK E S +VT SLV+P I
Sbjct: 91 GRTTGEDLVEAVKAMIARNGLTSRTVATTTDCEPSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARRVVTRYNMSSQASDRLEQMRDIVQVERKKVVQDVETRWWSTYASICRLLSLRRPITEHERIDSIPPLLKEKDWEVLQVVEPLSKPFILSQKHREASKDVTVSLVIPYI 278
BLAST of mRNA_H-elongata_contig73780.15071.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI) HSP 1 Score: 186 bits (471), Expect = 1.210e-52 Identity = 96/186 (51.61%), Postives = 132/186 (70.97%), Query Frame = 1
Query: 1 GSTTEEDLAASIEVMVKTHGLTGRVVVGNKDCEPSMVKAGRIL-TNKRVFTDVGCTCHRIECVTALVFDGPGVKKSMALARSLVTRYTKSSQAADRLQKLCGTVGIPPLRVMQDVETRWWSTHSVAERLVYLRRAVELLESLDNIAPLLGPVDWTVLEMLEPVISPFMYVQKELE-SNNVTGSLVV 552
G+TT EDLAA + MV+ H LTGRV+ DCEPSM+KAGR+L + + +GC+ HR+E T+ VF+G + ++ LAR+LV RY KSSQ A RL +LCG + + PL VMQDVETRWWST ++ RL+YL +A++L ES+D + PLL DW VL ++EP++ PFM QK+LE + VTGS+ +
Sbjct: 82 GTTTGEDLAALVAGMVERHDLTGRVIACVTDCEPSMIKAGRLLEVDGSTISHIGCSNHRMESTTSSVFNGRSLG-ALGLARTLVGRYKKSSQMAARLVQLCGILQMEPLSVMQDVETRWWSTWAMVVRLLYLMKAIKLHESMDEVHPLLSDTDWEVLRLIEPILRPFMKAQKDLEGAQYVTGSMTI 266
BLAST of mRNA_H-elongata_contig73780.15071.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE) HSP 1 Score: 180 bits (457), Expect = 9.720e-51 Identity = 96/189 (50.79%), Postives = 129/189 (68.25%), Query Frame = 1
Query: 1 GSTTEEDLAASIEVMVKTHGLTGRVVVGNKDCEPSMVKAGRIL-TNKRVFTDVGCTCHRIECVTALVFDGPGVKKSMALARSLVTRYTKSSQAADRLQKLCGTVGIPPLRVMQDVETRWWSTHSVAERLVYLRRAVELLESLDNIAPLLGPVDWTVLEMLEPVISPFMYVQKELE-SNNVTGSLVVPLI 561
GST EDLA I M++ HGLTGRV DCEPSMVKAGR+L +GC+ HR+E T+ VF+G + ++A AR++V RY +SSQ + RL G + + PL V+QDVETRWWS+ ++ ERL+YL +A++L ES DNIAP+L DW VL ++EP++ PFM QK+LE + VTGS+ VP I
Sbjct: 118 GSTHGEDLAREITSMIERHGLTGRVTACVTDCEPSMVKAGRLLEVGGSNLEHIGCSNHRMESTTSSVFNGKSLG-ALAKARAVVGRYKRSSQMSGRLAVFIGILKLSPLSVLQDVETRWWSSWAMIERLLYLMKAIKLHESTDNIAPVLSETDWEVLRLIEPILRPFMQAQKDLEGAKYVTGSMTVPKI 305
BLAST of mRNA_H-elongata_contig73780.15071.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE) HSP 1 Score: 181 bits (459), Expect = 1.670e-49 Identity = 94/186 (50.54%), Postives = 123/186 (66.13%), Query Frame = 1
Query: 7 TTEEDLAASIEVMVKTHGLTGRVVVGNKDCEPSMVKAGRILTNKRVFTDVGCTCHRIECVTALVFDGPGVKKSMALARSLVTRYTKSSQAADRLQKLCGTVGIPPLRVMQDVETRWWSTHSVAERLVYLRRAVELLESLDNIAPLLGPVDWTVLEMLEPVISPFMYVQKELE-SNNVTGSLVVPLI 561
T EDL +++ M+ +GLTGR V DCE SMVKAGR+L T +GC CHR+E +T+ F GPGV K++ALAR +VTRYT SSQA+DRL+++C V + V+QDVETRWWST+ RL+ LRR + E +D+ PLL DW VL+++E ++ PFM QK LE S VT LV P I
Sbjct: 49 TAGEDLVEAVKAMIARNGLTGRTVAITTDCELSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARGVVTRYTISSQASDRLEQVCDIVQVERKNVVQDVETRWWSTYVSICRLISLRRPITEHEIIDSTPPLLKEKDWEVLQLVESLLKPFMTAQKHLEASKEVTVRLVSPYI 234
BLAST of mRNA_H-elongata_contig73780.15071.1 vs. uniprot
Match: A0A6H5KVI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI1_9PHAE) HSP 1 Score: 171 bits (433), Expect = 1.490e-48 Identity = 89/188 (47.34%), Postives = 117/188 (62.23%), Query Frame = 1
Query: 1 GSTTEEDLAASIEVMVKTHGLTGRVVVGNKDCEPSMVKAGRILTNKRVFTDVGCTCHRIECVTALVFDGPGVKKSMALARSLVTRYTKSSQAADRLQKLCGTVGIPPLRVMQDVETRWWSTHSVAERLVYLRRAVELLESLDNIAPLLGPVDWTVLEMLEPVISPFMYVQKELE-SNNVTGSLVVPLI 561
G TT EDL +++ M+ +GLTGR V DCEP MVKAGR+L + +GC CHR E +T+ F GPGV K++AL R +VTRYT SSQA++RL+++C V + +V+QDVETRWWST +D+I PLL DW VL+++EP++ PFM QK LE S VT SLV I
Sbjct: 35 GRTTGEDLVEAVKAMIARNGLTGRTVATTTDCEPFMVKAGRLLEENEGVSHLGCFCHRFESITSQAFGGPGVSKALALPRGVVTRYTMSSQASNRLEQMCDIVQVERKKVVQDVETRWWSTP----------------REIDSIPPLLNEKDWEVLQLVEPLLHPFMTAQKHLEASKGVTVSLVTAYI 206
BLAST of mRNA_H-elongata_contig73780.15071.1 vs. uniprot
Match: A0A6H5L7Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Y8_9PHAE) HSP 1 Score: 115 bits (287), Expect = 2.500e-26 Identity = 63/118 (53.39%), Postives = 81/118 (68.64%), Query Frame = 1
Query: 1 GSTTEEDLAASIEVMVKTHGLTGRVVVGNKDCEPSMVKAGRILT-NKRVFTDVGCTCHRIECVTALVFDGPGVKKSMALARSLVTRYTKSSQAADRLQKLCGT-VGIPPLRVMQDVET 348
G+TT + LAA I+ V HGLTG+V DCEPSMVK GR+L + V T +GC +R+E +++VF+GP VKK M LAR LVTRY SSQAADRL++ T +G+ RV+QDV T
Sbjct: 82 GTTTGDALAAGIKATVAKHGLTGKVTAVTTDCEPSMVKMGRLLAGDATVSTQIGCCNYRLESTSSIVFNGPRVKKVMVLARGLVTRYPTSSQAADRLKQFVKTYLGVDNKRVIQDVVT 199
BLAST of mRNA_H-elongata_contig73780.15071.1 vs. uniprot
Match: A0A498MJP0_LABRO (Zinc finger BED domain-containing 6-like isoform X2 n=2 Tax=Labeo rohita TaxID=84645 RepID=A0A498MJP0_LABRO) HSP 1 Score: 73.9 bits (180), Expect = 1.360e-12 Identity = 54/189 (28.57%), Postives = 93/189 (49.21%), Query Frame = 1
Query: 4 STTEEDLAASIEVMVKTHGLTGRVVVGNKDCEPSMVKAGRILTNKRVFTDVGCTCHRIECVTALVFDGPGVKKSM-ALARSLVTRYTKSSQAADRLQKLCGTVGIPPLRVMQDVETRWWSTHSVAERLVYLRRAV-ELLESLDNIAPLLGPVDWTVLEMLEPVISPFMYVQKELESNN-VTGSLVVPLI 561
S T +++ ++ ++ GLTG V D +MV A K + C H I + + V + + AR +V+ + S++A ++L +G PL+++Q+V+TRW STH + +RL+ LR V L SL N L D+ ++ V++PF Y +EL V+ S ++P+I
Sbjct: 14 SHTADNIKEALLELISDWGLTGSVAAMVTDNAANMVSA----IQKLGLRHLPCFAHTINLIVKRAVEEHEVMADIRSRARRVVSYFRSSTKATEKLILAQERMGRQPLKLLQEVDTRWNSTHDMLQRLIDLREPVGAALASLSNDIMPLSSADFDIISESLEVLAPFKYATEELSGEKRVSASKIIPII 198
BLAST of mRNA_H-elongata_contig73780.15071.1 vs. uniprot
Match: A0A224XKI7_9HEMI (Putative hat-25 zm (Fragment) n=1 Tax=Panstrongylus lignarius TaxID=156445 RepID=A0A224XKI7_9HEMI) HSP 1 Score: 72.8 bits (177), Expect = 1.190e-11 Identity = 45/183 (24.59%), Postives = 93/183 (50.82%), Query Frame = 1
Query: 16 EDLAASIEVMVKTHGLTGRVVVGNKDCEPSMVKAGRILTNKRVFTDVGCTCHRIECVTALVFDGPGVKKSMALARSLVTRYTKSSQAADRLQKLCGTVGIPPLRVMQDVETRWWSTHSVAERLVYLRRAVE-LLESLDNIAPLLGPVDWTVLEMLEPVISPFMYVQKELESNNV-TGSLVVPL 558
ED+A +++ + + G+ ++++ D +M KA + L + F GC H I + ++ + + +V + +S A ++L + T PL+++Q+V+TRW ST+ + ER V L A++ + +D P L +W +L+ + ++ P+ V K + + T ++V+PL
Sbjct: 229 EDIAGTLKRITQYWGIDQKIILAVSDNASNMQKAIQQLLEWKHF---GCFAHTINLIVKDALKCKDIQAIVEKVKRIVEYFRRSCTATEKLSRYQATSRNTPLKLIQEVQTRWNSTYYMLERFVSLEEAIKSTMAIIDKDLPKLNFEEWKILKEMCQILKPYENVTKAISGDKYCTAAIVIPL 408
BLAST of mRNA_H-elongata_contig73780.15071.1 vs. uniprot
Match: A0A6V7VT18_9BILA (Hypothetical protein n=1 Tax=Meloidogyne enterolobii TaxID=390850 RepID=A0A6V7VT18_9BILA) HSP 1 Score: 67.8 bits (164), Expect = 2.170e-10 Identity = 43/151 (28.48%), Postives = 78/151 (51.66%), Query Frame = 1
Query: 136 KRVFTDVG-----CTCHRIE-CVTALVF----DGPGVKKSMALARSLVTRYTKSSQAADRLQKLCGTVGIPPLRVMQDVETRWWSTHSVAERLVYLRRAVELLESLDNIAPLLGPVDWTVLEMLEPVISPFMYVQKELESNNVTGSLVVPL 558
KRV TD+G C H ++ CV A + D P + + A+ V + KS ++ ++L + +P L + +D+E RW ST + +RL+ +RR ++LL +NI P DW L ++ ++ K L++ V+ S+++P+
Sbjct: 2 KRVTTDLGFKSQDCLAHVLQLCVKAGISLFNNDEPELSNLIERAKRFVRKIKKSRVLSEEFKELQAALELPSLSLQKDIEVRWNSTFEMIDRLIKIRRVIDLLCDRNNI-PSFSNTDWLSLGSIKKLLQSVYDATKLLQNQTVSISVIIPI 151
BLAST of mRNA_H-elongata_contig73780.15071.1 vs. uniprot
Match: UPI001F088102 (zinc finger BED domain-containing protein 4-like n=1 Tax=Hypomesus transpacificus TaxID=137520 RepID=UPI001F088102) HSP 1 Score: 68.6 bits (166), Expect = 3.040e-10 Identity = 57/188 (30.32%), Postives = 90/188 (47.87%), Query Frame = 1
Query: 10 TEEDLAASIEVMVKTHGLTGRVVVGNKDCEPSMVKAGRILTNKRVFTDVGCTCHRIECVTALVFD-GPGVKKSMALARSLVTRYTKSSQAADRLQKLCGTVGIPPLRVMQDVETRWWSTHSVAERLVYLRRAV-ELLESLDNIAPLLGPVDW-TVLEMLEPVISPFMYVQKEL-ESNNVTGSLVVPLI 561
T E + + V+++ GL +V D +M+ ++L + V C H + V + P ++ R +V + S+ A +RL G +GIP L+++Q+VETRW ST ER+ R AV L SL P L + TV E LE ++ PF + EL E V+ S V+P++
Sbjct: 54 TAEHIKEAKNVLLEEWGLKDKVHCLITDNASNMILCAKLLKMRHV----PCFAHTLNLVVKKALEVTPEIQDIRTRTRRIVAFFKSSTNAKERLSVTQGQLGIPTLKLVQEVETRWNSTFQKLERMYEQRLAVGAALGSLTMDIPALSTTELQTVSECLE-ILGPFNHANVELSEEKRVSSSKVIPIL 236 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig73780.15071.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig73780.15071.1 >prot_H-elongata_contig73780.15071.1 ID=prot_H-elongata_contig73780.15071.1|Name=mRNA_H-elongata_contig73780.15071.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=187bp GSTTEEDLAASIEVMVKTHGLTGRVVVGNKDCEPSMVKAGRILTNKRVFTback to top mRNA from alignment at H-elongata_contig73780:719..1279+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig73780.15071.1 ID=mRNA_H-elongata_contig73780.15071.1|Name=mRNA_H-elongata_contig73780.15071.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=561bp|location=Sequence derived from alignment at H-elongata_contig73780:719..1279+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig73780:719..1279+ >mRNA_H-elongata_contig73780.15071.1 ID=mRNA_H-elongata_contig73780.15071.1|Name=mRNA_H-elongata_contig73780.15071.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1122bp|location=Sequence derived from alignment at H-elongata_contig73780:719..1279+ (Himanthalia elongata Himel1 dioecious)back to top |