prot_H-elongata_contig72054.14882.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig72054.14882.1
Unique Nameprot_H-elongata_contig72054.14882.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length70
Homology
BLAST of mRNA_H-elongata_contig72054.14882.1 vs. uniprot
Match: D8LM42_ECTSI (Rab7, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM42_ECTSI)

HSP 1 Score: 114 bits (286), Expect = 2.280e-30
Identity = 57/61 (93.44%), Postives = 60/61 (98.36%), Query Frame = 0
Query:    1 MASRRRALLKIIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKDIIIDDKLVSLQV 61
            MASRRRALLKIIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKD +IDDKLV+LQ+
Sbjct:    1 MASRRRALLKIIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKDTVIDDKLVTLQI 61          
BLAST of mRNA_H-elongata_contig72054.14882.1 vs. uniprot
Match: A0A4Y2VG89_ARAVE (Ras-related protein Rab-7a (Fragment) n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2VG89_ARAVE)

HSP 1 Score: 107 bits (266), Expect = 3.610e-29
Identity = 49/60 (81.67%), Postives = 60/60 (100.00%), Query Frame = 0
Query:    1 MASRRRALLKIIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKDIIIDDKLVSLQ 60
            MA+R++ALLK+IILGDSGVGKTSLMNQYVNKRF+NQYKATIGADFLTK+I++DD+LV++Q
Sbjct:    1 MAARKKALLKVIILGDSGVGKTSLMNQYVNKRFTNQYKATIGADFLTKEIVVDDRLVTMQ 60          
BLAST of mRNA_H-elongata_contig72054.14882.1 vs. uniprot
Match: A0A131ZX67_SARSC (Ras-related protein Rab-7a-like protein n=1 Tax=Sarcoptes scabiei TaxID=52283 RepID=A0A131ZX67_SARSC)

HSP 1 Score: 109 bits (272), Expect = 4.110e-29
Identity = 50/61 (81.97%), Postives = 61/61 (100.00%), Query Frame = 0
Query:    1 MASRRRALLKIIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKDIIIDDKLVSLQV 61
            MASR++A+LK+IILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTK++I+DD+LV++Q+
Sbjct:    1 MASRKKAMLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVIVDDRLVTMQI 61          
BLAST of mRNA_H-elongata_contig72054.14882.1 vs. uniprot
Match: UPI000C6E44E6 (ras-related protein Rab-7a-like n=1 Tax=Centruroides sculpturatus TaxID=218467 RepID=UPI000C6E44E6)

HSP 1 Score: 107 bits (268), Expect = 4.460e-29
Identity = 52/72 (72.22%), Postives = 66/72 (91.67%), Query Frame = 0
Query:    1 MASRRRALLKIIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKDIIIDDKLVSLQV--ISNVTIQQD 70
            M+SR++ LLK+IILGDSGVGKTSLMNQYVNK+FSNQYKATIGADFLTK++ +DD+LV++QV  I+N  ++QD
Sbjct:   15 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVTVDDRLVTMQVMIITNYNLRQD 86          
BLAST of mRNA_H-elongata_contig72054.14882.1 vs. uniprot
Match: O44214_TRIPS (Rab7-like protein (Fragment) n=1 Tax=Trichinella pseudospiralis TaxID=6337 RepID=O44214_TRIPS)

HSP 1 Score: 105 bits (262), Expect = 1.820e-28
Identity = 48/61 (78.69%), Postives = 58/61 (95.08%), Query Frame = 0
Query:    1 MASRRRALLKIIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKDIIIDDKLVSLQV 61
            MA+R++ LLK+IILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKD ++DD+ V++Q+
Sbjct:    1 MATRKKVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKDAVVDDRFVTMQI 61          
BLAST of mRNA_H-elongata_contig72054.14882.1 vs. uniprot
Match: A0A834RGU1_SARSC (Ras-related protein Rab-7a n=1 Tax=Sarcoptes scabiei TaxID=52283 RepID=A0A834RGU1_SARSC)

HSP 1 Score: 109 bits (272), Expect = 2.460e-28
Identity = 50/61 (81.97%), Postives = 61/61 (100.00%), Query Frame = 0
Query:    1 MASRRRALLKIIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKDIIIDDKLVSLQV 61
            MASR++A+LK+IILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTK++I+DD+LV++Q+
Sbjct:    1 MASRKKAMLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVIVDDRLVTMQI 61          
BLAST of mRNA_H-elongata_contig72054.14882.1 vs. uniprot
Match: A0A8B7HZK7_MICMU (ras-related protein Rab-7a-like n=1 Tax=Microcebus murinus TaxID=30608 RepID=A0A8B7HZK7_MICMU)

HSP 1 Score: 105 bits (261), Expect = 3.050e-28
Identity = 48/61 (78.69%), Postives = 59/61 (96.72%), Query Frame = 0
Query:    1 MASRRRALLKIIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKDIIIDDKLVSLQV 61
            M SR++ LLK+IILGDSGVGKTSLMNQYVNK+FSNQYKATIGADFLTK++++DD+LV++QV
Sbjct:    1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQV 61          
BLAST of mRNA_H-elongata_contig72054.14882.1 vs. uniprot
Match: A0A8C4CAA1_9TELE (Ras-related protein rab7-like n=1 Tax=Denticeps clupeoides TaxID=299321 RepID=A0A8C4CAA1_9TELE)

HSP 1 Score: 105 bits (262), Expect = 3.180e-28
Identity = 48/60 (80.00%), Postives = 59/60 (98.33%), Query Frame = 0
Query:    1 MASRRRALLKIIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKDIIIDDKLVSLQ 60
            MASR++ LLK+IILGDSGVGKTSLMNQYVNK+FSNQYKATIGADFLTK++++DD+LV++Q
Sbjct:    1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60          
BLAST of mRNA_H-elongata_contig72054.14882.1 vs. uniprot
Match: A0A8C3ZJS1_9TELE (Ras-related protein rab7-like n=1 Tax=Denticeps clupeoides TaxID=299321 RepID=A0A8C3ZJS1_9TELE)

HSP 1 Score: 106 bits (265), Expect = 3.290e-28
Identity = 49/61 (80.33%), Postives = 60/61 (98.36%), Query Frame = 0
Query:    1 MASRRRALLKIIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKDIIIDDKLVSLQV 61
            MASR++ LLK+IILGDSGVGKTSLMNQYVNK+FSNQYKATIGADFLTK++++DD+LV++QV
Sbjct:    1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQV 61          
BLAST of mRNA_H-elongata_contig72054.14882.1 vs. uniprot
Match: A0A8C4CG83_9TELE (Ras-related protein rab7-like n=15 Tax=Osteoglossocephalai TaxID=1489341 RepID=A0A8C4CG83_9TELE)

HSP 1 Score: 106 bits (265), Expect = 3.800e-28
Identity = 49/61 (80.33%), Postives = 60/61 (98.36%), Query Frame = 0
Query:    1 MASRRRALLKIIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKDIIIDDKLVSLQV 61
            MASR++ LLK+IILGDSGVGKTSLMNQYVNK+FSNQYKATIGADFLTK++++DD+LV++QV
Sbjct:    1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQV 61          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig72054.14882.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LM42_ECTSI2.280e-3093.44Rab7, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2... [more]
A0A4Y2VG89_ARAVE3.610e-2981.67Ras-related protein Rab-7a (Fragment) n=1 Tax=Aran... [more]
A0A131ZX67_SARSC4.110e-2981.97Ras-related protein Rab-7a-like protein n=1 Tax=Sa... [more]
UPI000C6E44E64.460e-2972.22ras-related protein Rab-7a-like n=1 Tax=Centruroid... [more]
O44214_TRIPS1.820e-2878.69Rab7-like protein (Fragment) n=1 Tax=Trichinella p... [more]
A0A834RGU1_SARSC2.460e-2881.97Ras-related protein Rab-7a n=1 Tax=Sarcoptes scabi... [more]
A0A8B7HZK7_MICMU3.050e-2878.69ras-related protein Rab-7a-like n=1 Tax=Microcebus... [more]
A0A8C4CAA1_9TELE3.180e-2880.00Ras-related protein rab7-like n=1 Tax=Denticeps cl... [more]
A0A8C3ZJS1_9TELE3.290e-2880.33Ras-related protein rab7-like n=1 Tax=Denticeps cl... [more]
A0A8C4CG83_9TELE3.800e-2880.33Ras-related protein rab7-like n=15 Tax=Osteoglosso... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 32..48
score: 35.53
coord: 50..70
score: 15.52
coord: 9..30
score: 44.08
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 9..69
e-value: 0.0016
score: -65.9
NoneNo IPR availableGENE3D3.40.50.300coord: 1..64
e-value: 8.7E-19
score: 69.4
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 6..62
NoneNo IPR availablePANTHERPTHR24073:SF556RAS-RELATED PROTEIN RAB-7Acoord: 6..62
NoneNo IPR availablePROSITEPS51419RABcoord: 3..70
score: 12.056
IPR001806Small GTPasePFAMPF00071Rascoord: 10..62
e-value: 1.0E-16
score: 60.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 6..62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig72054contigH-elongata_contig72054:1939..2522 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig72054.14882.1mRNA_H-elongata_contig72054.14882.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig72054 1939..2525 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig72054.14882.1 ID=prot_H-elongata_contig72054.14882.1|Name=mRNA_H-elongata_contig72054.14882.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=70bp
MASRRRALLKIIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKDI
IIDDKLVSLQVISNVTIQQD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR027417P-loop_NTPase