mRNA_H-elongata_contig11932.1486.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig11932.1486.1 vs. uniprot
Match: A0A6H5LQ95_9PHAE (Trimethylguanosine synthase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LQ95_9PHAE) HSP 1 Score: 473 bits (1217), Expect = 1.110e-153 Identity = 357/710 (50.28%), Postives = 430/710 (60.56%), Query Frame = 2
Query: 83 MGRKTPGNLLLTSASLTDKPYETKLEMLRWIRTMLHGVVDVA-------AATALERSQDQQERQVDKDISLNHEKAN---GNRQEKEDCCE-NVLMGLNDDPVVLESSQQKVAQVSAVKKAESGDTDCRGNGGKRS--RPRKRPRAQSPFGMDDVAI-GSVVECFHPGDGLWYPATVSAIDTPSPRPDAADAVATISPGITPPSNSTSAS------TPRRDSVDHDSPEKSTGPNEENIVSDDTRLLEGVELQE----------------------------------EREMPEQLLEVTFLGYGGCSKVPRGWIREIVTPEVLKWCLDNGV---APGAILRAPNEAAADGDGDVDGNAAPDRAVAVDDVTIVVSRPGSVN--VKEGLGTVISGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNTNEERFLTRCAMRSKSPYPNVPNKYWGQRYRYFSRFDDGVTLDDEGWYSVTPEAIALHIAERVCCDLVVDPFVGCGGNAVQFALVCHLVFAIDLDPVKLEHARRNAAIYGVENRIEFILGDAMKVLPSLKADIVFLSPPWGGPQYQASETFDLYSMIPTPLSAVEIFRAARKVTPNVVFFLPRNVDFDQVAALPAAAV---EGFSRSSRSSSMATDSLDGRDGAVESPTLETCELERHFLNGKFKTTAAYFGEGL 2026
MGR P NL +SA LTDKPY+ +L +LRWIR +L VVD A AA ++ + + + D D++ A G+ +K++ + + + L +L+ V A T RG+GG S RKRPR +P DV + GSVVECFHP DGLWYPAT++A+ P A AV + PPS+S A+ T + SP K+T P ++D + V + +LL+VTFLGYG S+VP W REIVTPEVL+WC +NG+ + G + P +A +G G A + VAV +V P N + + + GS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + EERFL RCA RSKSPYP+V NKYWGQRYRYFSRFD+GVT+D+EGWYSVTPEAIA HIAERVCCD+VVDPFVGCGGNAVQFALV HLVFA+D+DPVKLEHARRNAAIYGVE+RIEFILGDAMKVLP+LKAD VFLSPPWGGP YQ S+TFDL SMIP PLSA+++FRAAR+VTPN+VFFLPRNVD QVA LPAAA G +R+ + L D +TCELE+HFLNGK KTT AYFGE +
Sbjct: 1 MGRSLPVNLTHSSAYLTDKPYDVQLGVLRWIRGLLSEVVDNAVSQLSTTAAGSIHNVEPETQGDDDDDVACGRSAAREVGGSIPQKDEGVDGSEALNLKSTAALLDEC------VGAA------TTGSRGDGGSSSTGNGRKRPRTSTPLDRRDVFVPGSVVECFHPDDGLWYPATITAVIAQPPI--EAPAVKAHPEAVAPPSDSLLATAAPTTLTAKHGEGGPTSPAKAT-PAAAGGEAEDGGVHSFVMVHSLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLLDVTFLGYGNQSRVPVDWAREIVTPEVLEWCKENGIVAASEGGFVEKPCDAKEEGALTTAG-AGDNNTVAVTEVWAETPDPAVNNSTIPTSVSREVGGSDSQHPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAGT------QGEEEERFLMRCASRSKSPYPHVSNKYWGQRYRYFSRFDEGVTMDEEGWYSVTPEAIARHIAERVCCDVVVDPFVGCGGNAVQFALVAHLVFAVDIDPVKLEHARRNAAIYGVEDRIEFILGDAMKVLPTLKADAVFLSPPWGGPSYQGSKTFDLDSMIPPPLSALDMFRAAREVTPNIVFFLPRNVDPYQVARLPAAAAAIPRGGARAGITEEQRGVDLQAID--------DTCELEKHFLNGKLKTTTAYFGEDI 680
BLAST of mRNA_H-elongata_contig11932.1486.1 vs. uniprot
Match: D7FIG9_ECTSI (Trimethylguanosine synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIG9_ECTSI) HSP 1 Score: 402 bits (1032), Expect = 2.880e-129 Identity = 265/421 (62.95%), Postives = 303/421 (71.97%), Query Frame = 2
Query: 788 REMPEQLLEVTFLG----YGGCSKVPRGWIREIVTPEVLKWCLDNGVAPGAILRAPNEAAADGDGDV--DGNAAPDRAVAVDDVTIVVSRPGSVN--VKEGLGTVISGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNTNEERFLTRCAMRSKSPYPNVPNKYWGQRYRYFSRFDDGVTLDDEGWYSVTPEAIALHIAERVCCDLVVDPFVGCGGNAVQFALVCHLVFAIDLDPVKLEHARRNAAIYGVENRIEFILGDAMKVLPSLKADIVFLSPPWGGPQYQASETFDLYSMIPTPLSAVEIFRAARKVTPNVVFFLPRNVDFDQVAALPAAAVEGFSRSSRSSSMATDSLDGRDGAVESPTLETCELERHFLNGKFKTTAAYFGEGL 2026
RE+ +L+ T+L + ++VP W REIVTPEVL+WC +NG+ + E +G V A + AVAV +V P N + + + GS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + EERFL RCA RSKSPYP+VPNKYWGQRYRYFSRFD+GVT+D+EGWYSVTPEAIA HIAERVCCD+VVDPFVGCGGNAVQFALV HLVFAID+DPVKLEHARRNAAIYGVE+RIEFILGDAMKVLP+LKAD VFLSPPWGGP YQ S+TFDL SMIP PLSA+E+FRAAR+VTPNVVFFLPRNVD QVA LPAAA R + +A + A++ +TCELE+HFLNGK KTT AYFGE +
Sbjct: 14 RELQRRLIGGTYLSLDLLWSVFTRVPVDWAREIVTPEVLEWCKENGIVAASAGGTVEETCDAKEGGVVTTAGAGDNDAVAVTEVWAETPDPAVNNSIMPTSVSREVGGSDSQHPAAVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHVGT------QGEEEERFLMRCASRSKSPYPHVPNKYWGQRYRYFSRFDEGVTMDEEGWYSVTPEAIARHIAERVCCDVVVDPFVGCGGNAVQFALVAHLVFAIDIDPVKLEHARRNAAIYGVEDRIEFILGDAMKVLPTLKADAVFLSPPWGGPSYQGSKTFDLDSMIPHPLSALEMFRAAREVTPNVVFFLPRNVDPYQVARLPAAAA-AIPRGGAGAGIAEEQRGVDLQAID----DTCELEKHFLNGKLKTTTAYFGEDI 423
BLAST of mRNA_H-elongata_contig11932.1486.1 vs. uniprot
Match: A7SAF9_NEMVE (Trimethylguanosine synthase n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7SAF9_NEMVE) HSP 1 Score: 238 bits (608), Expect = 6.020e-71 Identity = 115/227 (50.66%), Postives = 150/227 (66.08%), Query Frame = 2
Query: 1340 KYWGQRYRYFSRFDDGVTLDDEGWYSVTPEAIALHIAERVCCDLVVDPFVGCGGNAVQFALVCHLVFAIDLDPVKLEHARRNAAIYGVENRIEFILGDAMKVLPSLKADIVFLSPPWGGPQYQASETFDLYSMIPTPLSAVEIFRAARKVTPNVVFFLPRNVDFDQVAALPAAAVEGFSRSSRSSSMATDSLDGRDGAVESPTLETCELERHFLNGKFKTTAAYFGE 2020
KYW QRYR FSRFD+G+ +D EGWYSVTPE IA HIAER CDL+VD F G GGNA+QFA C V AID+DPVK++ AR NA IYGV +RIEF+LGD +++P LKAD++FLSPPWGGP Y ++ FD+ +MI L E++ A++VTPN+ +F+PRNV+ +Q+ +L A G VE +E++F+N K KT AY+GE
Sbjct: 12 KYWAQRYRLFSRFDEGIKMDKEGWYSVTPERIAEHIAERCRCDLIVDAFCGVGGNAIQFAFTCERVIAIDIDPVKIDCARHNAEIYGVADRIEFVLGDFRQIVPQLKADVIFLSPPWGGPGYACADVFDIQTMI--SLDGFELYETAKRVTPNIAYFMPRNVNMEQLTSLAGPA----------------------GKVE--------IEQNFVNKKLKTVTAYYGE 206
BLAST of mRNA_H-elongata_contig11932.1486.1 vs. uniprot
Match: T1FY55_HELRO (Trimethylguanosine synthase n=1 Tax=Helobdella robusta TaxID=6412 RepID=T1FY55_HELRO) HSP 1 Score: 230 bits (586), Expect = 1.040e-67 Identity = 116/228 (50.88%), Postives = 150/228 (65.79%), Query Frame = 2
Query: 1337 NKYWGQRYRYFSRFDDGVTLDDEGWYSVTPEAIALHIAERVCCDLVVDPFVGCGGNAVQFALVCHLVFAIDLDPVKLEHARRNAAIYGVENRIEFILGDAMKVLPSLKADIVFLSPPWGGPQYQASETFDLYSMIPTPLSAVEIFRAARKVTPNVVFFLPRNVDFDQVAALPAAAVEGFSRSSRSSSMATDSLDGRDGAVESPTLETCELERHFLNGKFKTTAAYFGE 2020
NKYW QRYR FSRFD G+ +DDEGWYSVTPE IA HIA R CD++VD F G GGN +QFA C+ V AID+DP K+ +AR NAAIYGV ++I+FI+GD + + P+LKAD+VFLSPPWGGP Y ++ FD+ +M+ +P + EI+ + +T NV FFLPRN D +QV+ SL G G+VE +E++ LNGK KT AYFG+
Sbjct: 9 NKYWAQRYRLFSRFDRGIRIDDEGWYSVTPEKIARHIANRCKCDVIVDAFCGIGGNTIQFAFTCNKVIAIDIDPQKISYARHNAAIYGVAHKIQFIVGDYLVLAPTLKADVVFLSPPWGGPSYLDAKLFDIKTMM-SP-NGFEIWEKTKLITRNVAFFLPRNTDVEQVS----------------------SLAGSGGSVE--------IEQNLLNGKIKTLTAYFGD 204
BLAST of mRNA_H-elongata_contig11932.1486.1 vs. uniprot
Match: V4AVC3_LOTGI (Trimethylguanosine synthase n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4AVC3_LOTGI) HSP 1 Score: 231 bits (588), Expect = 2.420e-67 Identity = 115/227 (50.66%), Postives = 150/227 (66.08%), Query Frame = 2
Query: 1340 KYWGQRYRYFSRFDDGVTLDDEGWYSVTPEAIALHIAERVCCDLVVDPFVGCGGNAVQFALVCHLVFAIDLDPVKLEHARRNAAIYGVENRIEFILGDAMKVLPSLKADIVFLSPPWGGPQYQASETFDLYSMIPTPLSAVEIFRAARKVTPNVVFFLPRNVDFDQVAALPAAAVEGFSRSSRSSSMATDSLDGRDGAVESPTLETCELERHFLNGKFKTTAAYFGE 2020
KYW QRYR FSRFD+G+ LD E W+SVTPE I+ HIAER CD++VD F G GGN +QFAL C V AID+DPVK+E AR NA +YGVE+RIEFI+GD KV+PSL+AD+VFLSPPWGGP+Y ++ +DL +M L+A +IF+ ++K+T N+ FF+PRN + DQ+ L G G VE +E++ LN K KT AY+G+
Sbjct: 59 KYWYQRYRLFSRFDEGIQLDRESWFSVTPEKISEHIAERCQCDVIVDGFCGAGGNTIQFALYCERVIAIDIDPVKIELARNNAKVYGVEDRIEFIVGDFYKVMPSLQADVVFLSPPWGGPEYLNNKNYDLNNM--ACLNAFDIFKISQKITQNIAFFVPRNTNIDQLTVLA----------------------GSGGKVE--------IEQNILNSKLKTITAYYGD 253
BLAST of mRNA_H-elongata_contig11932.1486.1 vs. uniprot
Match: A0A162Q323_MUCCL (Trimethylguanosine synthase n=1 Tax=Mucor lusitanicus CBS 277.49 TaxID=747725 RepID=A0A162Q323_MUCCL) HSP 1 Score: 230 bits (586), Expect = 3.670e-67 Identity = 117/234 (50.00%), Postives = 142/234 (60.68%), Query Frame = 2
Query: 1319 PYPNVPNKYWGQRYRYFSRFDDGVTLDDEGWYSVTPEAIALHIAERVCCDLVVDPFVGCGGNAVQFALVCHLVFAIDLDPVKLEHARRNAAIYGVENRIEFILGDAMKVLPSLKADIVFLSPPWGGPQYQASETFDLYSMIPTPLSAVEIFRAARKVTPNVVFFLPRNVDFDQVAALPAAAVEGFSRSSRSSSMATDSLDGRDGAVESPTLETCELERHFLNGKFKTTAAYFGE 2020
P + N+Y+ QRY YFS+FD G+ +D EGW+SVTPE IA HIA R D+++D F GCGGN++QFAL C V AIDLDPVKL AR NA IYGV +RIEFILGD + P+LKAD VFLSPPWGGP Y A + +DL SMIP + I + A +TPNV FF+PRN D Q+A L TCE+E + LNGK K AY+GE
Sbjct: 26 PCTQLENRYYYQRYAYFSKFDQGILMDKEGWFSVTPEKIARHIALRCQSDIIIDAFCGCGGNSIQFALTCERVIAIDLDPVKLHCARENAKIYGVADRIEFILGDFFDLAPNLKADCVFLSPPWGGPAYMAEDVYDLKSMIPG--DGMNIHKIASSITPNVAFFVPRNTDPQQLAQLAGPG------------------------------NTCEIELNSLNGKIKALTAYYGE 227
BLAST of mRNA_H-elongata_contig11932.1486.1 vs. uniprot
Match: A0A8H7SMN9_9FUNG (Trimethylguanosine synthase n=1 Tax=Thamnidium elegans TaxID=101142 RepID=A0A8H7SMN9_9FUNG) HSP 1 Score: 233 bits (595), Expect = 7.600e-67 Identity = 117/232 (50.43%), Postives = 147/232 (63.36%), Query Frame = 2
Query: 1325 PNVPNKYWGQRYRYFSRFDDGVTLDDEGWYSVTPEAIALHIAERVCCDLVVDPFVGCGGNAVQFALVCHLVFAIDLDPVKLEHARRNAAIYGVENRIEFILGDAMKVLPSLKADIVFLSPPWGGPQYQASETFDLYSMIPTPLSAVEIFRAARKVTPNVVFFLPRNVDFDQVAALPAAAVEGFSRSSRSSSMATDSLDGRDGAVESPTLETCELERHFLNGKFKTTAAYFGE 2020
P KY+ QRY YFS+FD G+ +D EGW+SVTPE IA HIA+R D+V+D F GCGGN++QFAL C V AIDLDPVKL AR NA IYGV +RIEFILGD + P+LKAD+VFLSPPWGGP Y + +TFDL SMIP + ++I + A ++TPNV FF+PRN D +Q+A L TCE+E++ LNGK K Y+G+
Sbjct: 152 PQHMKKYYNQRYSYFSKFDQGILMDKEGWFSVTPEKIARHIAQRCQSDVVIDAFCGCGGNSIQFALTCERVIAIDLDPVKLHCARENAKIYGVADRIEFILGDFFDLAPTLKADVVFLSPPWGGPSYLSEDTFDLKSMIPG--NGLKIHQIASQITPNVAFFVPRNTDPEQLAQLAGPN------------------------------STCEIEQNSLNGKIKALTVYYGD 351
BLAST of mRNA_H-elongata_contig11932.1486.1 vs. uniprot
Match: A0A397UDF9_9GLOM (Trimethylguanosine synthase n=3 Tax=Gigaspora TaxID=4873 RepID=A0A397UDF9_9GLOM) HSP 1 Score: 228 bits (581), Expect = 1.010e-66 Identity = 108/232 (46.55%), Postives = 151/232 (65.09%), Query Frame = 2
Query: 1325 PNVPNKYWGQRYRYFSRFDDGVTLDDEGWYSVTPEAIALHIAERVCCDLVVDPFVGCGGNAVQFALVCHLVFAIDLDPVKLEHARRNAAIYGVENRIEFILGDAMKVLPSLKADIVFLSPPWGGPQYQASETFDLYSMIPTPLSAVEIFRAARKVTPNVVFFLPRNVDFDQVAALPAAAVEGFSRSSRSSSMATDSLDGRDGAVESPTLETCELERHFLNGKFKTTAAYFGE 2020
P+ KYW QR F+++ +G+ +D+EGWYSVTPE +A+HIAER CD+++D F G GGNA+QFA CH V AID+D KL A+ NA IYGV +RIEFILGD +K++P LKAD+VFLSPPWGGP Y +++TFD+ +MI P+ +++R + K+T N+ ++LPRNV+ Q+ +L GR TCE++ ++NGK KT AY+GE
Sbjct: 22 PDFLKKYWTQRSILFTKYKEGILMDEEGWYSVTPEDVAIHIAERCRCDIIIDAFCGVGGNAIQFAFTCHQVIAIDIDETKLMCAKHNAMIYGVADRIEFILGDYLKLIPKLKADVVFLSPPWGGPNYLSAKTFDIKTMI--PMDGEKLYRESLKITNNIAYYLPRNVNIQQIT----------------------NLAGRGN--------TCEIQEVYINGKLKTMVAYYGE 221
BLAST of mRNA_H-elongata_contig11932.1486.1 vs. uniprot
Match: T2M7H7_HYDVU (Trimethylguanosine synthase (Fragment) n=2 Tax=Hydra vulgaris TaxID=6087 RepID=T2M7H7_HYDVU) HSP 1 Score: 235 bits (599), Expect = 1.160e-66 Identity = 125/251 (49.80%), Postives = 156/251 (62.15%), Query Frame = 2
Query: 1265 KNTNEERFLTRCAMRSKSPYPNVPNKYWGQRYRYFSRFDDGVTLDDEGWYSVTPEAIALHIAERVCCDLVVDPFVGCGGNAVQFALVCHLVFAIDLDPVKLEHARRNAAIYGVENRIEFILGDAMKVLPSLKADIVFLSPPWGGPQYQASETFDLYSMIPTPLSAVEIFRAARKVTPNVVFFLPRNVDFDQVAALPAAAVEGFSRSSRSSSMATDSLDGRDGAVESPTLETCELERHFLNGKFKTTAAYFG 2017
K ++ F T+ + SK KYW QRYR FSRFD+GV LD EGW+SVTPE IA HIA+R CD+VVD F G GGN +QFAL + V AID+DPV+LE AR+NAAIYGVENRI FILGD + PSLKAD+VFLSPPWGGP+Y + FD+ +MI P+S ++ A K+TPN++FFLPRN D QV++L A + E+E++ LN KT AYFG
Sbjct: 213 KAKKKKSFFTKKSNASKYKSILSIQKYWAQRYRLFSRFDEGVKLDHEGWFSVTPEKIAEHIADRSKCDIVVDAFCGIGGNTIQFALKSNHVIAIDIDPVRLECARQNAAIYGVENRISFILGDFFVLAPSLKADVVFLSPPWGGPEYIKVKFFDIETMI-KPVSGRVLYNVASKITPNIIFFLPRNADLRQVSSLVAPGNQ------------------------------VEIEKNLLNSNVKTITAYFG 432
BLAST of mRNA_H-elongata_contig11932.1486.1 vs. uniprot
Match: A0A8H7BYG9_9FUNG (Trimethylguanosine synthase n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7BYG9_9FUNG) HSP 1 Score: 233 bits (593), Expect = 6.210e-66 Identity = 116/227 (51.10%), Postives = 147/227 (64.76%), Query Frame = 2
Query: 1340 KYWGQRYRYFSRFDDGVTLDDEGWYSVTPEAIALHIAERVCCDLVVDPFVGCGGNAVQFALVCHLVFAIDLDPVKLEHARRNAAIYGVENRIEFILGDAMKVLPSLKADIVFLSPPWGGPQYQASETFDLYSMIPTPLSAVEIFRAARKVTPNVVFFLPRNVDFDQVAALPAAAVEGFSRSSRSSSMATDSLDGRDGAVESPTLETCELERHFLNGKFKTTAAYFGE 2020
KY+ QRY YFSRFD G+ +D EGW+SVTPE IALHIAER CD+++D F GCGGNA+QFA+ C V AIDLDPVKL AR NA IYGVE+RIEFI GD ++ PSLKAD+VFLSPPWGGP+YQ S FDL +MIP + I++ A+ +T NV +F+PRN D +Q+A L +T E+E+++L G K AY+G+
Sbjct: 211 KYFFQRYDYFSRFDQGILMDREGWFSVTPEKIALHIAERCQCDVIIDAFCGCGGNAIQFAMTCERVIAIDLDPVKLACARHNAKIYGVEDRIEFIQGDFFQLAPSLKADVVFLSPPWGGPEYQQSAVFDLKTMIPG--DGLRIYQLAKNITHNVAYFVPRNTDPEQLAWLAGPG------------------------------QTAEIEQNYLRGYLKALTAYYGD 405 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11932.1486.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig11932.1486.1 >prot_H-elongata_contig11932.1486.1 ID=prot_H-elongata_contig11932.1486.1|Name=mRNA_H-elongata_contig11932.1486.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=648bp MGRKTPGNLLLTSASLTDKPYETKLEMLRWIRTMLHGVVDVAAATALERSback to top mRNA from alignment at H-elongata_contig11932:1428..8034+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig11932.1486.1 ID=mRNA_H-elongata_contig11932.1486.1|Name=mRNA_H-elongata_contig11932.1486.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6607bp|location=Sequence derived from alignment at H-elongata_contig11932:1428..8034+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig11932:1428..8034+ >mRNA_H-elongata_contig11932.1486.1 ID=mRNA_H-elongata_contig11932.1486.1|Name=mRNA_H-elongata_contig11932.1486.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3888bp|location=Sequence derived from alignment at H-elongata_contig11932:1428..8034+ (Himanthalia elongata Himel1 dioecious)back to top |