prot_H-elongata_contig71520.14815.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig71520.14815.1
Unique Nameprot_H-elongata_contig71520.14815.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length69
Homology
BLAST of mRNA_H-elongata_contig71520.14815.1 vs. uniprot
Match: D7FK16_ECTSI (Cytochrome b-c1 complex subunit Rieske, mitochondrial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK16_ECTSI)

HSP 1 Score: 130 bits (327), Expect = 3.810e-36
Identity = 63/69 (91.30%), Postives = 68/69 (98.55%), Query Frame = 0
Query:    1 QDGYFEKDRIPKGDPGKREFTYFMLGSARFLYASTARLILLKFLASWEPAADVMALATAEFDLKDIEMG 69
            QDGYFEKDR+ KGDPGKREFTYFMLG++RFLYAS+ARLILLKFLASWEPAADVMALATAEF+LKDIEMG
Sbjct:   71 QDGYFEKDRVAKGDPGKREFTYFMLGASRFLYASSARLILLKFLASWEPAADVMALATAEFELKDIEMG 139          
BLAST of mRNA_H-elongata_contig71520.14815.1 vs. uniprot
Match: A0A2D4CB52_PYTIN (Cytochrome b-c1 complex subunit Rieske, mitochondrial n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4CB52_PYTIN)

HSP 1 Score: 89.4 bits (220), Expect = 2.020e-20
Identity = 44/68 (64.71%), Postives = 52/68 (76.47%), Query Frame = 0
Query:    2 DGYFEKDRIPKGDPGKREFTYFMLGSARFLYASTARLILLKFLASWEPAADVMALATAEFDLKDIEMG 69
            D YFEKDRI  GDP KR FTYFMLG AR  YA+ ARL ++KF+ S   +ADV+ALATAEFDL +I+ G
Sbjct:   41 DHYFEKDRIASGDPSKRAFTYFMLGGARVAYATAARLAVIKFVGSMSASADVLALATAEFDLSNIDEG 108          
BLAST of mRNA_H-elongata_contig71520.14815.1 vs. uniprot
Match: A0A2P4YJR4_9STRA (Cytochrome b-c1 complex subunit Rieske (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YJR4_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 2.600e-20
Identity = 44/68 (64.71%), Postives = 51/68 (75.00%), Query Frame = 0
Query:    2 DGYFEKDRIPKGDPGKREFTYFMLGSARFLYASTARLILLKFLASWEPAADVMALATAEFDLKDIEMG 69
            D YFEKDRI  GDP KR FTYFMLG AR  YA+ ARL ++KF+ S   +ADV+ALATAEFDL +I  G
Sbjct:   37 DHYFEKDRIDAGDPSKRAFTYFMLGGARVAYATAARLAVVKFVGSMSASADVLALATAEFDLSNINEG 104          
BLAST of mRNA_H-elongata_contig71520.14815.1 vs. uniprot
Match: H3GII1_PHYRM (Cytochrome b-c1 complex subunit Rieske, mitochondrial n=13 Tax=Peronosporaceae TaxID=4777 RepID=H3GII1_PHYRM)

HSP 1 Score: 87.8 bits (216), Expect = 7.330e-20
Identity = 44/68 (64.71%), Postives = 51/68 (75.00%), Query Frame = 0
Query:    2 DGYFEKDRIPKGDPGKREFTYFMLGSARFLYASTARLILLKFLASWEPAADVMALATAEFDLKDIEMG 69
            D YFEKDRI  GDP KR FTYFMLG AR  YA+ ARL ++KF+ S   +ADV+ALATAEFDL +I  G
Sbjct:   37 DHYFEKDRIDAGDPSKRAFTYFMLGGARVAYATAARLAVVKFVGSMSASADVLALATAEFDLSNINEG 104          
BLAST of mRNA_H-elongata_contig71520.14815.1 vs. uniprot
Match: W7TQL4_9STRA (Cytochrome b-c1 complex subunit Rieske, mitochondrial n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQL4_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 9.840e-20
Identity = 42/70 (60.00%), Postives = 56/70 (80.00%), Query Frame = 0
Query:    2 DGYFEKDRIPK--GDPGKREFTYFMLGSARFLYASTARLILLKFLASWEPAADVMALATAEFDLKDIEMG 69
            D Y+EKD++ K  GDP KR+FTYF+LG ARF+YAS ARL+ LKF+++   +ADV+ALA AEFD+ DI +G
Sbjct:   50 DNYYEKDKLHKKPGDPNKRDFTYFVLGGARFIYASAARLVALKFVSTMSASADVLALANAEFDIGDIPLG 119          
BLAST of mRNA_H-elongata_contig71520.14815.1 vs. uniprot
Match: W2M1B7_PHYPR (Cytochrome b-c1 complex subunit Rieske, mitochondrial n=10 Tax=Peronosporaceae TaxID=4777 RepID=W2M1B7_PHYPR)

HSP 1 Score: 87.4 bits (215), Expect = 1.010e-19
Identity = 44/68 (64.71%), Postives = 50/68 (73.53%), Query Frame = 0
Query:    2 DGYFEKDRIPKGDPGKREFTYFMLGSARFLYASTARLILLKFLASWEPAADVMALATAEFDLKDIEMG 69
            D YFEKDRI  GDP KR FTYFMLG AR  YA+ ARL ++KF+ S   +ADV+ALATAEFDL  I  G
Sbjct:   36 DHYFEKDRIDAGDPSKRAFTYFMLGGARVAYATAARLAVVKFVGSMSASADVLALATAEFDLSSINEG 103          
BLAST of mRNA_H-elongata_contig71520.14815.1 vs. uniprot
Match: K3WIU0_GLOUD (Cytochrome b-c1 complex subunit Rieske, mitochondrial n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WIU0_GLOUD)

HSP 1 Score: 86.3 bits (212), Expect = 2.950e-19
Identity = 42/68 (61.76%), Postives = 51/68 (75.00%), Query Frame = 0
Query:    2 DGYFEKDRIPKGDPGKREFTYFMLGSARFLYASTARLILLKFLASWEPAADVMALATAEFDLKDIEMG 69
            D YFEKDRI  GDP KR FTYF+LG AR  YA+  RL ++KF+ S   +ADV+ALATAEFDL +I+ G
Sbjct:   38 DHYFEKDRISAGDPSKRAFTYFLLGGARVAYATAGRLAVIKFVGSMSASADVLALATAEFDLSNIDEG 105          
BLAST of mRNA_H-elongata_contig71520.14815.1 vs. uniprot
Match: A0A5D6XVF7_9STRA (Cytochrome b-c1 complex subunit Rieske, mitochondrial n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XVF7_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 2.950e-19
Identity = 42/68 (61.76%), Postives = 51/68 (75.00%), Query Frame = 0
Query:    2 DGYFEKDRIPKGDPGKREFTYFMLGSARFLYASTARLILLKFLASWEPAADVMALATAEFDLKDIEMG 69
            D YFEKDRI  GDP KR FTYF+LG AR  YA+  RL ++KF+ S   +ADV+ALATAEFDL +I+ G
Sbjct:   38 DHYFEKDRIAPGDPSKRAFTYFLLGGARVAYATAGRLAVIKFVGSMSASADVLALATAEFDLSNIDEG 105          
BLAST of mRNA_H-elongata_contig71520.14815.1 vs. uniprot
Match: F0W758_9STRA (Cytochrome b-c1 complex subunit Rieske, mitochondrial n=2 Tax=Albugo TaxID=65356 RepID=F0W758_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 6.200e-19
Identity = 41/68 (60.29%), Postives = 51/68 (75.00%), Query Frame = 0
Query:    2 DGYFEKDRIPKGDPGKREFTYFMLGSARFLYASTARLILLKFLASWEPAADVMALATAEFDLKDIEMG 69
            D YFE DRI  GDP +R FTYF+LG AR +YA+ ARL ++KF+ S   +ADV+ALATAEFDL  I+ G
Sbjct:   41 DHYFETDRISSGDPSRRAFTYFVLGGARIMYATAARLAVIKFVGSMSASADVLALATAEFDLSSIDEG 108          
BLAST of mRNA_H-elongata_contig71520.14815.1 vs. uniprot
Match: A0A6V1WQS7_HETAK (Cytochrome b-c1 complex subunit Rieske, mitochondrial n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1WQS7_HETAK)

HSP 1 Score: 85.1 bits (209), Expect = 9.970e-19
Identity = 43/69 (62.32%), Postives = 55/69 (79.71%), Query Frame = 0
Query:    1 QDGYFEKDRIPKGDPGKREFTYFMLGSARFLYASTARLILLKFLASWEPAADVMALATAEFDLKDIEMG 69
            QD YFEKDR+ KG+  KREFTYFMLG +RF+YAS ARL L+KF++S   +ADV+ALA+ E +L  +EMG
Sbjct:   48 QDHYFEKDRLAKGE-NKREFTYFMLGCSRFIYASAARLALIKFVSSMSASADVLALASVEVELGAVEMG 115          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig71520.14815.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FK16_ECTSI3.810e-3691.30Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
A0A2D4CB52_PYTIN2.020e-2064.71Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
A0A2P4YJR4_9STRA2.600e-2064.71Cytochrome b-c1 complex subunit Rieske (Fragment) ... [more]
H3GII1_PHYRM7.330e-2064.71Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
W7TQL4_9STRA9.840e-2060.00Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
W2M1B7_PHYPR1.010e-1964.71Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
K3WIU0_GLOUD2.950e-1961.76Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
A0A5D6XVF7_9STRA2.950e-1961.76Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
F0W758_9STRA6.200e-1960.29Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
A0A6V1WQS7_HETAK9.970e-1962.32Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004192Cytochrome b-c1 complex subunit Rieske, transmembrane domainPFAMPF02921UCR_TMcoord: 13..52
e-value: 1.8E-6
score: 28.3
IPR014349Rieske iron-sulphur proteinPANTHERPTHR10134CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIALcoord: 5..69
NoneNo IPR availablePANTHERPTHR10134:SF25coord: 5..69
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 41..69
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..40
NoneNo IPR availableSUPERFAMILY81502ISP transmembrane anchorcoord: 8..54

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig71520contigH-elongata_contig71520:100..922 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig71520.14815.1mRNA_H-elongata_contig71520.14815.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig71520 100..922 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig71520.14815.1 ID=prot_H-elongata_contig71520.14815.1|Name=mRNA_H-elongata_contig71520.14815.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=69bp
QDGYFEKDRIPKGDPGKREFTYFMLGSARFLYASTARLILLKFLASWEPA
ADVMALATAEFDLKDIEMG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004192Rieske_TM
IPR014349Rieske_Fe-S_prot