mRNA_H-elongata_contig70679.14732.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig70679.14732.1 vs. uniprot
Match: D8LHU5_ECTSI (cAMP-dependent protein kinase regulatory subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHU5_ECTSI) HSP 1 Score: 184 bits (468), Expect = 1.810e-55 Identity = 88/114 (77.19%), Postives = 99/114 (86.84%), Query Frame = 1
Query: 7 QVIDSMEEKRYEPGSVIIREGGPGDYFYVTSSGELEVFIAGKNKGSPVRTLKPGDTFGELALMYNSPRTATVKAVTECLVWALDRTTFRHTIMEAGQQRRQKYEHFLSTVSSIR 348
+V+DSMEE+RY+ G +I EGGPGD+FYVT SGELEVFIAGKN P+RTLK GD FGELALMYNSPRTATVKAVT CLVWALDRTTFRHTI+EAGQQRRQKYE FL+ V ++
Sbjct: 97 EVVDSMEERRYQSGDAVIEEGGPGDFFYVTGSGELEVFIAGKNNDEPLRTLKSGDAFGELALMYNSPRTATVKAVTGCLVWALDRTTFRHTILEAGQQRRQKYEVFLANVEILK 210
BLAST of mRNA_H-elongata_contig70679.14732.1 vs. uniprot
Match: A0A835Z617_9STRA (Camp-dependent protein kinase regulatory subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z617_9STRA) HSP 1 Score: 144 bits (363), Expect = 1.440e-39 Identity = 71/114 (62.28%), Postives = 88/114 (77.19%), Query Frame = 1
Query: 7 QVIDSMEEKRYEPGSVIIREGGPGDYFYVTSSGELEVFIAGKNKGSPVRTLKPGDTFGELALMYNSPRTATVKAVTECLVWALDRTTFRHTIMEAGQQRRQKYEHFLSTVSSIR 348
+VID+MEEK Y G+ II+EG GD FYV +SGE EVFI GKN G+ +RT++ G FGELALMYN+PR+AT+KAV + WALDR TFR TIM AGQ RR+KYEHFL+ + +R
Sbjct: 107 EVIDAMEEKDYAAGACIIQEGHDGDNFYVVASGECEVFIEGKNDGAALRTIRTGGGFGELALMYNAPRSATIKAVGDVKCWALDRVTFRRTIMAAGQARRKKYEHFLNQLELLR 220
BLAST of mRNA_H-elongata_contig70679.14732.1 vs. uniprot
Match: A0A835Z5U7_9STRA (Camp-dependent protein kinase regulatory subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5U7_9STRA) HSP 1 Score: 134 bits (336), Expect = 1.050e-35 Identity = 66/114 (57.89%), Postives = 81/114 (71.05%), Query Frame = 1
Query: 7 QVIDSMEEKRYEPGSVIIREGGPGDYFYVTSSGELEVFIAGKNKGSPVRTLKPGDTFGELALMYNSPRTATVKAVTECLVWALDRTTFRHTIMEAGQQRRQKYEHFLSTVSSIR 348
+V+D+ME+K Y G II EG GD FYV +SGE EVFI GKN G+ +R +K G FGELALMYN+PR+AT+KA WALDR TFR TIM AGQ RR+KYE FL + ++
Sbjct: 88 EVVDAMEQKDYAAGDTIISEGADGDNFYVIASGECEVFIEGKNDGAALRVMKAGSGFGELALMYNAPRSATIKAKVAVRCWALDRATFRRTIMAAGQARRKKYEQFLVKLDLLK 201
BLAST of mRNA_H-elongata_contig70679.14732.1 vs. uniprot
Match: A0A4P9XWS4_9FUNG (cAMP-dependent protein kinase regulatory subunit n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XWS4_9FUNG) HSP 1 Score: 119 bits (297), Expect = 1.450e-29 Identity = 59/110 (53.64%), Postives = 77/110 (70.00%), Query Frame = 1
Query: 10 VIDSMEEKRYEPGSVIIREGGPGDYFYVTSSGELEVFIAGKN-KGSPVRTLKPGDTFGELALMYNSPRTATVKAVTECLVWALDRTTFRHTIMEAGQQRRQKYEHFLSTV 336
VID+M EK G V+I++GG GDYFYV SG LEV+++ G+ V PG +FGELALMYN+PR ATVKA ++C++WALDR TFR +ME ++R+ YE FL V
Sbjct: 169 VIDAMSEKHVVDGEVVIQQGGIGDYFYVVESGTLEVYVSRDGGPGAKVHEYGPGGSFGELALMYNAPRAATVKATSDCVLWALDRVTFRRILMERTSRKRRMYELFLEEV 278
BLAST of mRNA_H-elongata_contig70679.14732.1 vs. uniprot
Match: D8S0D3_SELML (Uncharacterized protein n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8S0D3_SELML) HSP 1 Score: 114 bits (286), Expect = 9.050e-29 Identity = 55/115 (47.83%), Postives = 78/115 (67.83%), Query Frame = 1
Query: 10 VIDSMEEKRYEPGSVIIREGGPGDYFYVTSSGELEVFIAGKNKGSP--VRTLKPGDTFGELALMYNSPRTATVKAVTECLVWALDRTTFRHTIMEAGQQRRQKYEHFLSTVSSIR 348
V+DS+EE +Y P +II++G GD F++ GE EV++ + P V+ PGDTFGELAL+YN+PR ATVKA+T C +WA+DR TFR +M+ +RQ YE FL+ V ++
Sbjct: 57 VVDSVEEVKYNPNDIIIKQGDEGDKFFLIEIGECEVWLKDPERIRPEMVKRYGPGDTFGELALLYNAPRAATVKAITSCTLWAVDRPTFRAILMQTTNNKRQLYEKFLAEVPLLK 171
BLAST of mRNA_H-elongata_contig70679.14732.1 vs. uniprot
Match: D8SB21_SELML (Uncharacterized protein n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SB21_SELML) HSP 1 Score: 114 bits (286), Expect = 9.050e-29 Identity = 55/115 (47.83%), Postives = 78/115 (67.83%), Query Frame = 1
Query: 10 VIDSMEEKRYEPGSVIIREGGPGDYFYVTSSGELEVFIAGKNKGSP--VRTLKPGDTFGELALMYNSPRTATVKAVTECLVWALDRTTFRHTIMEAGQQRRQKYEHFLSTVSSIR 348
V+DS+EE +Y P +II++G GD F++ GE EV++ + P V+ PGDTFGELAL+YN+PR ATVKA+T C +WA+DR TFR +M+ +RQ YE FL+ V ++
Sbjct: 57 VVDSVEEVKYNPNDIIIKQGDEGDKFFLIEIGECEVWLKDPERIRPEMVKRYGPGDTFGELALLYNAPRAATVKAITSCTLWAVDRPTFRAILMQTTNNKRQLYEKFLAEVPLLK 171
BLAST of mRNA_H-elongata_contig70679.14732.1 vs. uniprot
Match: G0R4B7_ICHMG (cGMP-dependent protein kinase n=1 Tax=Ichthyophthirius multifiliis (strain G5) TaxID=857967 RepID=G0R4B7_ICHMG) HSP 1 Score: 118 bits (295), Expect = 1.590e-28 Identity = 53/115 (46.09%), Postives = 83/115 (72.17%), Query Frame = 1
Query: 10 VIDSMEEKRYEPGSVIIREGGPGDYFYVTSSGELEVFIAGKNKGSP--VRTLKPGDTFGELALMYNSPRTATVKAVTECLVWALDRTTFRHTIMEAGQQRRQKYEHFLSTVSSIR 348
V+++MEEK+Y+ G +IR+G G Y YV G+L+ F +N+ P ++T +P ++FGELAL+YN+PR A++ A TECLVWALDR TF H + +A ++R+KYE FL+++ ++
Sbjct: 445 VVNAMEEKKYQAGDYVIRQGEEGTYLYVIEKGQLDCFKKYQNQPQPTYLKTYQPSESFGELALLYNAPRAASIVAKTECLVWALDRETFNHIVKDAAMRKREKYEQFLTSLPLLK 559
BLAST of mRNA_H-elongata_contig70679.14732.1 vs. uniprot
Match: A0A1Y2C8Z2_9FUNG (cAMP-dependent protein kinase regulatory subunit n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2C8Z2_9FUNG) HSP 1 Score: 113 bits (282), Expect = 2.900e-28 Identity = 57/114 (50.00%), Postives = 79/114 (69.30%), Query Frame = 1
Query: 10 VIDSMEEKRYEPGSVIIREGGPGDYFYVTSSGELEVFIAGKNKGSPVRTLKPGD--TFGELALMYNSPRTATVKAVTECLVWALDRTTFRHTIMEAGQQRRQKYEHFLSTVSSI 345
V+D+M EKR G +I++GG GD+FYV +G L+VF++ KN PV+ + GD +FGELALMYN+PR ATV A +E ++WALDR TFR +ME ++R+ YE FL V +
Sbjct: 45 VVDAMSEKRVAAGEEVIKQGGVGDFFYVVETGTLDVFVS-KNGNPPVKVYEYGDGGSFGELALMYNAPRAATVVATSESVLWALDRVTFRRILMENTSRKRRMYEGFLEEVKLL 157
BLAST of mRNA_H-elongata_contig70679.14732.1 vs. uniprot
Match: A0A1Y2FKP9_9FUNG (cAMP-dependent protein kinase regulatory subunit n=2 Tax=Neocallimastix californiae TaxID=1754190 RepID=A0A1Y2FKP9_9FUNG) HSP 1 Score: 115 bits (288), Expect = 5.250e-28 Identity = 57/111 (51.35%), Postives = 79/111 (71.17%), Query Frame = 1
Query: 10 VIDSMEEKRYEPGSVIIREGGPGDYFYVTSSGELEVFIAGKNKGSPVRT--LKPGDTFGELALMYNSPRTATVKAVTECLVWALDRTTFRHTIMEAGQQRRQKYEHFLSTV 336
V+++M EKR G +IR+GG GD+FYV +G L++FI+ KN G PV+ PG +FGELALMYN+PR AT+ A ++C++WALDR TFR +ME ++R+ YE FL V
Sbjct: 219 VVNAMSEKRAVNGDCVIRQGGVGDFFYVVETGTLDIFIS-KNGGQPVKVGDYGPGASFGELALMYNAPRAATIMATSDCILWALDRITFRKILMENTSRKRKMYELFLEEV 328
BLAST of mRNA_H-elongata_contig70679.14732.1 vs. uniprot
Match: A0A1Y2I493_9FUNG (cAMP-dependent protein kinase regulatory subunit n=1 Tax=Catenaria anguillulae PL171 TaxID=765915 RepID=A0A1Y2I493_9FUNG) HSP 1 Score: 114 bits (285), Expect = 6.540e-28 Identity = 55/112 (49.11%), Postives = 77/112 (68.75%), Query Frame = 1
Query: 4 IQVIDSMEEKRYEPGSVIIREGGPGDYFYVTSSGELEVFIAGKNKGS-PVRTLKPGDTFGELALMYNSPRTATVKAVTECLVWALDRTTFRHTIMEAGQQRRQKYEHFLSTV 336
+ V+++M EKR G V+IR+GG GDYFYV +G L+V++ N G V G +FGELALMYN+PR AT+KA ++C++WALDR TFR +M+ ++R+ YE FL V
Sbjct: 171 LDVVNAMAEKRVPNGEVVIRQGGVGDYFYVVETGTLDVYVNRNNSGDIKVFDYGAGGSFGELALMYNAPRAATIKATSDCVLWALDRVTFRRILMDHTSRKRRMYEGFLEEV 282 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig70679.14732.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig70679.14732.1 >prot_H-elongata_contig70679.14732.1 ID=prot_H-elongata_contig70679.14732.1|Name=mRNA_H-elongata_contig70679.14732.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=117bp MIQVIDSMEEKRYEPGSVIIREGGPGDYFYVTSSGELEVFIAGKNKGSPVback to top mRNA from alignment at H-elongata_contig70679:1380..3089+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig70679.14732.1 ID=mRNA_H-elongata_contig70679.14732.1|Name=mRNA_H-elongata_contig70679.14732.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1710bp|location=Sequence derived from alignment at H-elongata_contig70679:1380..3089+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig70679:1380..3089+ >mRNA_H-elongata_contig70679.14732.1 ID=mRNA_H-elongata_contig70679.14732.1|Name=mRNA_H-elongata_contig70679.14732.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=702bp|location=Sequence derived from alignment at H-elongata_contig70679:1380..3089+ (Himanthalia elongata Himel1 dioecious)back to top |