prot_H-elongata_contig7066.14728.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig7066.14728.1
Unique Nameprot_H-elongata_contig7066.14728.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length345
Homology
BLAST of mRNA_H-elongata_contig7066.14728.1 vs. uniprot
Match: D7FVJ7_ECTSI (PFtsY, plastid signal recognition particle receptor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVJ7_ECTSI)

HSP 1 Score: 525 bits (1352), Expect = 5.980e-183
Identity = 279/345 (80.87%), Postives = 299/345 (86.67%), Query Frame = 0
Query:    1 RNVKFVDGLAKSRLRLMGDLDNLLGAAGPLEETLEKLEEALLQADIGATTSFQIIEDLRQTARAEDRSLEPDDIKAVLRATLIQVLNGGVMPPETTTVEAGTSVINAEDVNGGGEVTNPKTYVPPPSAAITFADPSLGVPSVLFFMGANGMGKTTTVGKVASRLKDDGGQKVLLAAADTFRAAAVEQLMEWAERSGADIVTPLDSEERPPSVVTRAAQKAVADGYDVLIVDTSGRLSNNYGLNQELKDMKKALGGVIPGAPHETLLVVDASVGRNAVDQARTWKEEVGISALVVTKLDGTARGGFVVSIVSDLGVPVKLVGVGESLYDLRDFEPVLYVDSLLGYT 345
            RN KF DGLA+SRLR +GDL+NL G AGPLEETLEKLEEALLQAD+GATTSFQIIEDLR TA+AEDR LEPDDIK+VLRATLIQVLNGG MP                   GGG+           +AAITFADPSLGVPSVLFFMGANGMGKTTTVGKVASRL++DGGQKVLLAAADTFRAAAVEQL EWAERSGADIV PLD +ERPPSVV RAA+KAV++GYDVLIVDTSGRLSNNY LN+ELKDMKKAL   IPGAPH+TLLVVDASVGRNAVDQARTWK+EVGISALVVTKLDGTARGGFVVSIVSDLGVPVKL+GVGESLYDLRDFEPVL+VDSLLGY+
Sbjct:  137 RNAKFSDGLAQSRLRFVGDLENLFGMAGPLEETLEKLEEALLQADLGATTSFQIIEDLRNTAKAEDRRLEPDDIKSVLRATLIQVLNGGTMP----------------SAEGGGD-----------TAAITFADPSLGVPSVLFFMGANGMGKTTTVGKVASRLREDGGQKVLLAAADTFRAAAVEQLNEWAERSGADIVVPLDKDERPPSVVARAAEKAVSEGYDVLIVDTSGRLSNNYSLNEELKDMKKALSDRIPGAPHDTLLVVDASVGRNAVDQARTWKQEVGISALVVTKLDGTARGGFVVSIVSDLGVPVKLIGVGESLYDLRDFEPVLFVDSLLGYS 454          
BLAST of mRNA_H-elongata_contig7066.14728.1 vs. uniprot
Match: A0A6H5KTL2_9PHAE (SRP54 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTL2_9PHAE)

HSP 1 Score: 511 bits (1317), Expect = 6.960e-180
Identity = 276/355 (77.75%), Postives = 296/355 (83.38%), Query Frame = 0
Query:    2 NVKFVDGLAKSRLRLMGDLDNLLGAAGPLEETLEKLEEALLQADIGATTSFQIIEDLRQTARAEDRSLEPDDIKAVLRATLIQVLNGGVMPPETTTVEAGTSVINAEDVNGGGEVTNPKTYVPPPSAAITFADPSLGVPSVLFFMGANGMGKTTTVGKVASRLKDDGGQKVLLAAADTFR-----------AAAVEQLMEWAERSGADIVTPLDSEERPPSVVTRAAQKAVADGYDVLIVDTSGRLSNNYGLNQELKDMKKALGGVIPGAPHETLLVVDASVGRNAVDQARTWKEEVGISALVVTKLDGTARGGFVVSIVSDLGVPVKLVGVGESLYDLRDFEPVLYVDSLLGYT 345
            N KF DGLA+SRLR +GDL+NL G  GPLEETL KLEEALLQAD+GATTSFQIIEDLR TA+AEDR LEPDDIK+VLRATLIQVLNGG MPP                  GGG+           +AAITFADPSLGVPSVLFFMGANGMGKTTTVGKVASRL++DGGQKVLLAAADTFR           AAAVEQL EWAERSGADIV PLD +ERPPSVV RAA+KAV++GYDVLIVDTSGRLSNNY LN+ELKDMKK L   IPGAPH+TLLVVDASVGRNAVDQARTWK+EVGISALVVTKLDGTARGGFVVSIVSDLGVPVKL+GVGESLYDLRDFEPVL+VDSLLGY+
Sbjct:   41 NAKFSDGLAQSRLRFVGDLENLFGMTGPLEETLGKLEEALLQADLGATTSFQIIEDLRNTAKAEDRRLEPDDIKSVLRATLIQVLNGGTMPP----------------AEGGGD-----------TAAITFADPSLGVPSVLFFMGANGMGKTTTVGKVASRLREDGGQKVLLAAADTFRIEVIXXXXXXXAAAVEQLNEWAERSGADIVVPLDKDERPPSVVARAAEKAVSEGYDVLIVDTSGRLSNNYSLNEELKDMKKTLSDRIPGAPHDTLLVVDASVGRNAVDQARTWKQEVGISALVVTKLDGTARGGFVVSIVSDLGVPVKLIGVGESLYDLRDFEPVLFVDSLLGYS 368          
BLAST of mRNA_H-elongata_contig7066.14728.1 vs. uniprot
Match: A0A835ZC86_9STRA (PFtsY, plastid signal recognition particle receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC86_9STRA)

HSP 1 Score: 367 bits (942), Expect = 3.500e-122
Identity = 208/344 (60.47%), Postives = 242/344 (70.35%), Query Frame = 0
Query:    4 KFVDGLAKSRLRLMGDLDNLLGAAGPLEETLEKLEEALLQADIGATTSFQIIEDLRQTARAEDRSLEPDDIKAVLRATLIQVLNGGVMPPETTTVEAGTSVINAEDVNGGGEVTNPKTYVPPPSAAITFADPSLGVPSVLFFMGANGMGKTTTVGKVASRLKDDGGQ--KVLLAAADTFRAAAVEQLMEWAERSGADIVTPLDSEERPPSVVTRAAQKAVADGYDVLIVDTSGRLSNNYGLNQELKDMKKALGGVIPGAPHETLLVVDASVGRNAVDQARTWKEEVGISALVVTKLDGTARGGFVVSIVSDLGVPVKLVGVGESLYDLRDFEPVLYVDSLLGYT 345
            KF  GL KSR + +GDL   LG    L+ETL  LEE L+ +DIG+ T+ QII+ LR  A + +  LEP+D+  VLR TLI+VL G  + P              E  N      NP        +AI FA    GVPSVLF MGANGMGKTTT+GK+A+RLK   GQ  KVLL AADTFRAAAVEQL EW+ R+  DIV PLDSEERP SV  RA ++AV  GYDV++VDTSGRLSNN  LNQELK +K ++G VI GAPHETLLVVDASVGRNA  QA+TWK EVG+S L VTKLDGTAR GFVVSIV DLGVPVKL+GVGE L DLRDF+  L+VD+LLGY+
Sbjct:   53 KFTQGLTKSREKFLGDLSKALGRGDTLDETLTGLEEVLMTSDIGSATTLQIIDALRDIAGSSESKLEPEDVNCVLRGTLIEVLGGNAVGP-------------LEGAN------NP--------SAIKFAPADSGVPSVLFVMGANGMGKTTTIGKIAARLK---GQDLKVLLCAADTFRAAAVEQLEEWSNRAEVDIVKPLDSEERPESVAQRACERAVEGGYDVVVVDTSGRLSNNRKLNQELKAIKASIGSVIKGAPHETLLVVDASVGRNAFVQAKTWKSEVGVSGLAVTKLDGTARAGFVVSIVRDLGVPVKLIGVGEGLTDLRDFDAELFVDALLGYS 366          
BLAST of mRNA_H-elongata_contig7066.14728.1 vs. uniprot
Match: A0A7S2BL25_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BL25_9STRA)

HSP 1 Score: 348 bits (893), Expect = 2.570e-113
Identity = 194/346 (56.07%), Postives = 246/346 (71.10%), Query Frame = 0
Query:    2 NVKFVDGLAKSRLRLMGDLDNLLGAAGPLEETLEKLEEALLQADIGATTSFQIIEDLRQTARAEDRSLEPDDIKAVLRATLIQVLNGGVMPPETTTVEAGTSVINAEDVNGGGEVTNPKTYVPPPSAAITFADP---SLGVPSVLFFMGANGMGKTTTVGKVASRLKDDGGQKVLLAAADTFRAAAVEQLMEWAERSGADIVTPLDSEERPPSVVTRAAQKAVADGYDVLIVDTSGRLSNNYGLNQELKDMKKALGGVIPGAPHETLLVVDASVGRNAVDQARTWKEEVGISALVVTKLDGTARGGFVVSIVSDLGVPVKLVGVGESLYDLRDFEPVLYVDSLLGY 344
            N KF DGLAKSR +L+ +LD+L G    LEETLEKLEE L+ ADIG TT+ +I+ DLR+TA+  D  L+P+DIK+VLR  L+  L+G       + VEA   V N E+V+ G             S AI FA P   + G+P+VLF +GANGMGKTTT+GK+A RL+++ GQKVLLAA DTFRAAAVEQL  W+ER+  D   P   +++P  V+  A  KA+   YDVLIVDTSGRL+NN  LN+ELK M++ +   I   PHETLLVVDA +GRNAVDQA+ W+EEV +S +VVTKLDGTAR GFVV++  DLG+P+KL+GVGE + DLRDFEP  +VD+LLGY
Sbjct:  133 NEKFYDGLAKSRDQLISNLDSLFGGDMRLEETLEKLEELLMMADIGGTTTDEIMTDLRRTAK--DDRLDPEDIKSVLRGRLVATLDGRGGGDLASVVEASVDVANKENVDTGKNT----------SRAIAFASPEERANGMPTVLFVIGANGMGKTTTIGKLAHRLRNESGQKVLLAACDTFRAAAVEQLEMWSERAEVDFTGPRSDKDKPAFVLGAAIDKAIEGKYDVLIVDTSGRLANNRPLNEELKKMRRTIENKIGRPPHETLLVVDALIGRNAVDQAQIWQEEVQVSGVVVTKLDGTARAGFVVAMCRDLGLPIKLIGVGEKIDDLRDFEPGSFVDALLGY 466          
BLAST of mRNA_H-elongata_contig7066.14728.1 vs. uniprot
Match: K8Z941_NANGC (Fused signal recognition particle receptor n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z941_NANGC)

HSP 1 Score: 331 bits (848), Expect = 8.270e-109
Identity = 187/343 (54.52%), Postives = 232/343 (67.64%), Query Frame = 0
Query:    4 KFVDGLAKSRLRLMGDLDNLLGAAGP--LEETLEKLEEALLQADIGATTSFQIIEDLRQTARAEDRSLEPDDIKAVLRATLIQVLNGGVMPPETTTVEAGTSVINAEDVNGGGEVTNPKTYVPPPSAAITFADPSLGVPSVLFFMGANGMGKTTTVGKVASRLKDDGGQKVLLAAADTFRAAAVEQLMEWAERSGADIVTPLDSEERPPSVVTRAAQKAVADGYDVLIVDTSGRLSNNYGLNQELKDMKKALGGVIPGAPHETLLVVDASVGRNAVDQARTWKEEVGISALVVTKLDGTARGGFVVSIVSDLGVPVKLVGVGESLYDLRDFEPVLYVDSLLGY 344
            K  +GLAKSR RLMGDLD + G +    L +TL+KLEE L+ +DIGA T+ +II+DLR  A+AE   LEPDD+K+VLR  LI+ L          T +  +  +  E   G G     K+Y                 P VLF +GANGMGKTTT+GK+ASRLK++  Q VL+AA DTFRAAAV+QL EW  R+G DI  P + + +P  V+  A  KA+   YDVLIVDTSGRLSNN  LN+ELK +K+ +   IPG PHETLLV+D +VGRN VDQA+ W  EVGI+ LV+TKLDGTARGG VVSIV D+GVPVKL+GVGE + DLRDF P  +VD+LLGY
Sbjct:   26 KLQEGLAKSRQRLMGDLDVIFGVSEDVGLTKTLDKLEEVLMMSDIGAATTGEIIDDLRMVAKAE--KLEPDDVKSVLRLRLIEAL----------TAKDRSMQLKKEASAGNG-----KSY-----------------PRVLFVIGANGMGKTTTIGKIASRLKNEANQSVLVAACDTFRAAAVDQLEEWTVRAGVDIHRPGEGQTKPAPVLEEAISKAIEGDYDVLIVDTSGRLSNNVALNEELKKLKRTIADGIPGGPHETLLVLDGAVGRNGVDQAKVWNREVGITGLVITKLDGTARGGVVVSIVRDVGVPVKLIGVGEGIDDLRDFNPEDFVDALLGY 334          
BLAST of mRNA_H-elongata_contig7066.14728.1 vs. uniprot
Match: A0A4D9DHK9_9STRA (SRP54 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DHK9_9STRA)

HSP 1 Score: 330 bits (847), Expect = 1.230e-106
Identity = 187/343 (54.52%), Postives = 232/343 (67.64%), Query Frame = 0
Query:    4 KFVDGLAKSRLRLMGDLDNLLGAAGP--LEETLEKLEEALLQADIGATTSFQIIEDLRQTARAEDRSLEPDDIKAVLRATLIQVLNGGVMPPETTTVEAGTSVINAEDVNGGGEVTNPKTYVPPPSAAITFADPSLGVPSVLFFMGANGMGKTTTVGKVASRLKDDGGQKVLLAAADTFRAAAVEQLMEWAERSGADIVTPLDSEERPPSVVTRAAQKAVADGYDVLIVDTSGRLSNNYGLNQELKDMKKALGGVIPGAPHETLLVVDASVGRNAVDQARTWKEEVGISALVVTKLDGTARGGFVVSIVSDLGVPVKLVGVGESLYDLRDFEPVLYVDSLLGY 344
            K  +GLAKSR RLMGDLD + G +    L +TL+KLEE L+ +DIGA T+ +II+DLR  A+AE   LEPDD+K+VLR  LI+ L          T +  +  +  E   G G     K+Y                 P VLF +GANGMGKTTT+GK+ASRLK++  Q VL+AA DTFRAAAV+QL EW  R+G DI  P + + +P  V+  A  KA+   YDVLIVDTSGRLSNN  LN+ELK +K+ +   IPG PHETLLV+D +VGRN VDQA+ W  EVGI+ LV+TKLDGTARGG VVSIV D+GVPVKL+GVGE + DLRDF P  +VD+LLGY
Sbjct:  126 KLQEGLAKSRQRLMGDLDVIFGVSEDVGLTKTLDKLEEVLMMSDIGAATTGEIIDDLRMVAKAE--KLEPDDVKSVLRLRLIEAL----------TAKDRSMQLKKEASAGNG-----KSY-----------------PRVLFVIGANGMGKTTTIGKIASRLKNEANQSVLVAACDTFRAAAVDQLEEWTVRAGVDIHRPGEGQTKPAPVLEEAISKAIEGDYDVLIVDTSGRLSNNVALNEELKKLKRTIAEGIPGGPHETLLVLDGAVGRNGVDQAKVWNREVGITGLVITKLDGTARGGVVVSIVRDVGVPVKLIGVGEGIDDLRDFNPEDFVDALLGY 434          
BLAST of mRNA_H-elongata_contig7066.14728.1 vs. uniprot
Match: W7U0S2_9STRA (Signal recognition particle-docking protein FtsY n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U0S2_9STRA)

HSP 1 Score: 331 bits (848), Expect = 1.510e-100
Identity = 187/343 (54.52%), Postives = 232/343 (67.64%), Query Frame = 0
Query:    4 KFVDGLAKSRLRLMGDLDNLLGAAGP--LEETLEKLEEALLQADIGATTSFQIIEDLRQTARAEDRSLEPDDIKAVLRATLIQVLNGGVMPPETTTVEAGTSVINAEDVNGGGEVTNPKTYVPPPSAAITFADPSLGVPSVLFFMGANGMGKTTTVGKVASRLKDDGGQKVLLAAADTFRAAAVEQLMEWAERSGADIVTPLDSEERPPSVVTRAAQKAVADGYDVLIVDTSGRLSNNYGLNQELKDMKKALGGVIPGAPHETLLVVDASVGRNAVDQARTWKEEVGISALVVTKLDGTARGGFVVSIVSDLGVPVKLVGVGESLYDLRDFEPVLYVDSLLGY 344
            K  +GLAKSR RLMGDLD + G +    L +TL+KLEE L+ +DIGA T+ +II+DLR  A+AE   LEPDD+K+VLR  LI+ L          T +  +  +  E   G G     K+Y                 P VLF +GANGMGKTTT+GK+ASRLK++  Q VL+AA DTFRAAAV+QL EW  R+G DI  P + + +P  V+  A  KA+   YDVLIVDTSGRLSNN  LN+ELK +K+ +   IPG PHETLLV+D +VGRN VDQA+ W  EVGI+ LV+TKLDGTARGG VVSIV D+GVPVKL+GVGE + DLRDF P  +VD+LLGY
Sbjct:  126 KLQEGLAKSRQRLMGDLDVIFGVSEDVGLTKTLDKLEEVLMMSDIGAATTGEIIDDLRMVAKAE--KLEPDDVKSVLRLRLIEAL----------TAKDRSMQLKKEASAGNG-----KSY-----------------PRVLFVIGANGMGKTTTIGKIASRLKNEANQSVLVAACDTFRAAAVDQLEEWTVRAGVDIHRPGEGQTKPAPVLEEAISKAIEGDYDVLIVDTSGRLSNNVALNEELKKLKRTIADGIPGGPHETLLVLDGAVGRNGVDQAKVWNREVGITGLVITKLDGTARGGVVVSIVRDVGVPVKLIGVGEGIDDLRDFNPEDFVDALLGY 434          
BLAST of mRNA_H-elongata_contig7066.14728.1 vs. uniprot
Match: A0A8J2ST57_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2ST57_9STRA)

HSP 1 Score: 300 bits (767), Expect = 6.830e-96
Identity = 173/340 (50.88%), Postives = 220/340 (64.71%), Query Frame = 0
Query:    4 KFVDGLAKSRLRLMGDLDNLLGAAGP-LEETLEKLEEALLQADIGATTSFQIIEDLRQTARAEDRSLEPDDIKAVLRATLIQVLNGGVMPPETTTVEAGTSVINAEDVNGGGEVTNPKTYVPPPSAAITFADPSLGVPSVLFFMGANGMGKTTTVGKVASRLKDDGGQKVLLAAADTFRAAAVEQLMEWAERSGADIVTPLDSEERPPSVVTRAAQKAVADGYDVLIVDTSGRLSNNYGLNQELKDMKKALGGVIPGAPHETLLVVDASVGRNAVDQARTWKEEVGISALVVTKLDGTARGGFVVSIVSDLGVPVKLVGVGESLYDLRDFEPVLYVDSLL 342
            KF +GL KSR   + DL  +    G  L++TLEKLE+ALL ADIGATT+ QI++D++  A+A+    E  D+ A+LR  + + L+ G  P   T+ EAG                                      P+V+  +GANGMGKTTT+GK+A RL+ + GQKVLLAA DTFRAAAVEQL EWA R+  DIV P    E P +   +A   A+   YDV+IVDTSGRL NN  L  EL  +++ L   IPGAPHE+LLVVDA+VGRNA+DQAR W+++VG++ L VTKLDGTAR GFVVS+V DLG+PVKLVGVGE+L DLRDFE   +VD+LL
Sbjct:   59 KFTEGLEKSRQNFLSDLRGIFDVKGASLDQTLEKLEDALLSADIGATTTDQILDDVKGVAQAQGDYTE-QDVTAILRGRMAEALSAGG-PSSLTSAEAG--------------------------------------PTVILVLGANGMGKTTTIGKLARRLRAETGQKVLLAACDTFRAAAVEQLEEWAARAEVDIVVPDQGIESPAAAAYKACDVALQGDYDVVIVDTSGRLVNNRALTAELDKIRRTLEKKIPGAPHESLLVVDAAVGRNALDQARGWQQDVGVTGLAVTKLDGTARAGFVVSVVQDLGIPVKLVGVGETLDDLRDFEGERFVDALL 358          
BLAST of mRNA_H-elongata_contig7066.14728.1 vs. uniprot
Match: A0A0G4GQY1_VITBC (SRP54 domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GQY1_VITBC)

HSP 1 Score: 292 bits (748), Expect = 7.340e-92
Identity = 175/350 (50.00%), Postives = 222/350 (63.43%), Query Frame = 0
Query:    4 KFVDGLAKSRLRLMGDLDNLLGAAG-PLEETLEKLEEALLQADIGATTSFQIIEDLRQTARAEDRSLEPDDIKAVLRATLIQVLNGGVMPPETTTVEAGTSVINAEDVNGGGEVTNPKTYVPPPSAAITFADPSLGVPSVLFFMGANGMGKTTTVGKVASRLKDDGGQKVLLAAADTFRAAAVEQLMEWAERSGADIVTPLDSEERPPSVVTRAAQKAVAD--------GYDVLIVDTSGRLSNNYGLNQELKDMKKALGGVIPGAPHETLLVVDASVGRNAVDQARTWKEEVGISALVVTKLDGTARGGFVVSIVSDLGVPVKLVGVGESLYDLRDFEPVLYVDSLLGY 344
            KF +GL+KSR RL+  L  L G     LEE LE+LEE LL ADIG  T+  I+ DLR TAR E   ++P+DIK VLR  +++VL  G    ETT   +                            A+ ++   L   +V   MGANGMGKTTT+GK+A+RL+ + G++VL+AA DTFRAAAV+QL EWA R+  DI  P + E  P  VV  A  +A+           YDV+IVDT+GRL+NN  LN+EL+ M K     +P AP E LLVVDAS+GRNAV+QAR W+E++G++ LVVTKLDGTAR GFVVS+V DL +PVKLVGVGE L DLRDF+   YVD+L GY
Sbjct:   98 KFQEGLSKSRDRLLASLSGLFGMVNLELEEALEQLEEILLSADIGTATTADILTDLRATARGE--KIDPEDIKMVLRGKILEVLRMGTDKGETTESPS----------------------------ALRYSPDGL---TVWMVMGANGMGKTTTIGKLAARLRGE-GKRVLVAACDTFRAAAVDQLEEWANRAQVDIHRPQEGETEPWKVVEAALDEALTPLPDESGRLPYDVMIVDTAGRLANNVDLNEELEKMVKVTSKRLPAAPAEILLVVDASIGRNAVEQARIWQEDIGVTGLVVTKLDGTARAGFVVSVVRDLNLPVKLVGVGEKLEDLRDFDAENYVDALFGY 413          
BLAST of mRNA_H-elongata_contig7066.14728.1 vs. uniprot
Match: A0A448YUD7_9STRA (SRP54 domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YUD7_9STRA)

HSP 1 Score: 285 bits (728), Expect = 2.410e-88
Identity = 167/359 (46.52%), Postives = 232/359 (64.62%), Query Frame = 0
Query:    2 NVKFVDGLAKSRLRLMGDLDNLLG---AAGPLEETLEKLEEALLQADIGATTSFQIIEDLRQTARAEDRSLEPDDIKAVLRATLIQVLNGGVMPPETTTVEAGTSVINA-EDVNGGGEVTNPKTYVPPPSA-----AITFADPSLGVPSVLFFMGANGMGKTTTVGKVASRLKDDGGQKVLLAAADTFRAAAVEQLMEWAERSGADIVTPL-DSEERPPSVVTRAAQKAVADGYDVLIVDTSGRLSNNYGLNQELKDMKKALGGVIPGA-------PHETLLVVDASVGRNAVDQARTWKEEVGISALVVTKLDGTARGGFVVSIVSDLGVPVKLVGVGESLYDLRDFEPVLYVDSLLG 343
            N  F  GLA SR R + +LD L G   +A  ++E LE L++ LLQAD+G  TS  I+ +++  +  E+ S E  D + + R  L+ V+ G ++  ET   E     + A E+  G G+  + ++  P P++     AI FA     +P+VLF MGANGMGKTTT+GK+A+RLK +G QKVLLAA DTFRA AV+QL  WA+R+  D++ P  D    P ++   A +KA+A+GYD +++DT+GRLSNN+ LN+EL  MK A+   +          PHE LLV+DA+ GR A+D AR W +E+G+S LV+TKLDGTARGG VV+I  +L +PVKL+GVGE + DLRDFE   +VD LLG
Sbjct:  120 NEAFAAGLALSRNRFLNNLDGLFGGASSASTIDELLEDLQDVLLQADLGVATSEDIVAEVKSLS--ENNSEEGKDPRLLSREDLMSVMRGVLI--ETLDFETPDGAVAAVEETAGDGDDASEESEPPSPNSIPGASAIRFASKESKIPTVLFIMGANGMGKTTTIGKLANRLKIEGDQKVLLAACDTFRAGAVDQLQMWADRAEVDLLGPTPDGTSSPTTIAKAACEKALAEGYDTVMIDTAGRLSNNWELNEELVRMKGAIQEALGSGDEKNEDVPHEALLVLDAAQGRMALDSARVWNKEIGLSGLVLTKLDGTARGGSVVAISKELDLPVKLIGVGEGIDDLRDFEGEAFVDGLLG 474          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7066.14728.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVJ7_ECTSI5.980e-18380.87PFtsY, plastid signal recognition particle recepto... [more]
A0A6H5KTL2_9PHAE6.960e-18077.75SRP54 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A835ZC86_9STRA3.500e-12260.47PFtsY, plastid signal recognition particle recepto... [more]
A0A7S2BL25_9STRA2.570e-11356.07Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
K8Z941_NANGC8.270e-10954.52Fused signal recognition particle receptor n=1 Tax... [more]
A0A4D9DHK9_9STRA1.230e-10654.52SRP54 domain-containing protein n=1 Tax=Nannochlor... [more]
W7U0S2_9STRA1.510e-10054.52Signal recognition particle-docking protein FtsY n... [more]
A0A8J2ST57_9STRA6.830e-9650.88Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A0G4GQY1_VITBC7.340e-9250.00SRP54 domain-containing protein n=2 Tax=Vitrella b... [more]
A0A448YUD7_9STRA2.410e-8846.52SRP54 domain-containing protein n=1 Tax=Pseudo-nit... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013822Signal recognition particle SRP54, helical bundleSMARTSM00963SRP54_N_2coord: 5..86
e-value: 5.8E-6
score: 35.8
IPR013822Signal recognition particle SRP54, helical bundlePFAMPF02881SRP54_Ncoord: 30..81
e-value: 3.8E-8
score: 33.4
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 139..321
e-value: 3.3E-5
score: 33.3
IPR000897Signal recognition particle, SRP54 subunit, GTPase domainSMARTSM00962SRP54_3coord: 140..343
e-value: 5.8E-88
score: 308.2
IPR000897Signal recognition particle, SRP54 subunit, GTPase domainPFAMPF00448SRP54coord: 140..342
e-value: 7.3E-64
score: 215.0
IPR000897Signal recognition particle, SRP54 subunit, GTPase domainPROSITEPS00300SRP54coord: 316..329
NoneNo IPR availableGENE3D3.40.50.300coord: 137..343
e-value: 1.5E-68
score: 232.4
NoneNo IPR availablePANTHERPTHR43134FAMILY NOT NAMEDcoord: 138..343
coord: 5..117
IPR042101Signal recognition particle SRP54, N-terminal domain superfamilyGENE3D1.20.120.140coord: 2..89
e-value: 1.6E-16
score: 62.2
IPR004390Signal-recognition particle receptor FtsYPANTHERPTHR43134:SF7CELL DIVISION PROTEIN FTSY HOMOLOG, CHLOROPLASTICcoord: 138..343
coord: 5..117
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 135..343
IPR036225SRP/SRP receptor, N-terminalSUPERFAMILY47364Domain of the SRP/SRP receptor G-proteinscoord: 4..76

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7066contigH-elongata_contig7066:3154..10509 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7066.14728.1mRNA_H-elongata_contig7066.14728.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig7066 3154..10509 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig7066.14728.1 ID=prot_H-elongata_contig7066.14728.1|Name=mRNA_H-elongata_contig7066.14728.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=345bp
RNVKFVDGLAKSRLRLMGDLDNLLGAAGPLEETLEKLEEALLQADIGATT
SFQIIEDLRQTARAEDRSLEPDDIKAVLRATLIQVLNGGVMPPETTTVEA
GTSVINAEDVNGGGEVTNPKTYVPPPSAAITFADPSLGVPSVLFFMGANG
MGKTTTVGKVASRLKDDGGQKVLLAAADTFRAAAVEQLMEWAERSGADIV
TPLDSEERPPSVVTRAAQKAVADGYDVLIVDTSGRLSNNYGLNQELKDMK
KALGGVIPGAPHETLLVVDASVGRNAVDQARTWKEEVGISALVVTKLDGT
ARGGFVVSIVSDLGVPVKLVGVGESLYDLRDFEPVLYVDSLLGYT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013822Signal_recog_particl_SRP54_hlx
IPR003593AAA+_ATPase
IPR000897SRP54_GTPase_dom
IPR042101SRP54_N_sf
IPR004390SR_rcpt_FtsY
IPR027417P-loop_NTPase
IPR036225SRP/SRP_N