mRNA_H-elongata_contig7063.14724.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig7063.14724.1 vs. uniprot
Match: A0A6H5JI36_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JI36_9PHAE) HSP 1 Score: 382 bits (980), Expect = 3.110e-117 Identity = 218/524 (41.60%), Postives = 259/524 (49.43%), Query Frame = 1
Query: 1 YEYINYCPHCYQSRGPANVRARAESLTDPDELALYGNGAWPLLSVYERGEMASNGNYLEPDSISVRHGICGDPEQTSDESSNRYGNANSYYPVLETYTEGSVMEVKIVVSTTH-----------------------------------------------------------------------NGHLEFFLCDTDDLDDPDGAVTQGCFNMHPLDRAEDDGDASPIDPNYPGRYFLDPTCRSTETDQTILDGAFPGDVVTARYQLPSGVTCSRCIVQMAYYTGNSCMHPGYDDFNPTSWPSECAPNKEDWILTSLATCGDGDSYPEGKRSRHRTNIGRSSAILILLPRTDGTVSDPAPAPTPESSTLAPIADEDPTTETFAPFAEMSTMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVYKHTVMPETPTPSAMKAEPFHEDAEPIAATLPPATFAPSVAATELPPDECDEQLAAYSQCGGD-SYEGSSCCRPGYECTAVADCYSECRPIGGT----CAEGWG 1344
Y IN+CPHC+QSRGP+ VR R E T+ LA+YG G WP L YER E+ NGNY EP+ ISVRHGICGDPEQT E +N YG NS YPV Y+EG ++E+KIVVST H +GHLEFF+C+ +D+ DPDG VTQGCFNMHPLDRA+DDGDASPIDP++ GRY+LDP CR+ ETDQ L GA+PGDV TARY+LPSG+TCSRCI+QM YYTGN+C HPGYD+F+P S P CAP KEDW+ T L CG+ YPE + I I G + P+PT E PT E P E+ P TP E +T PSVA CD+ Y QCGGD SY+G +CC EC +ADCYSECRP T C+ WG
Sbjct: 29 YSDINWCPHCFQSRGPSAVRERGEENTEEAVLAMYGRGEWPHLFSYERNEVHGNGNYYEPEEISVRHGICGDPEQTKAEGTNLYGQENSKYPVHGKYSEGGIIEIKIVVSTYHWVRELPELSAQGFICGIAYLAFLVLVAAFAVVVFVFVVEEGEWKSAPTLYAHRAYEAVPGKYRALDYVHGGSGHLEFFICNAEDMSDPDGVVTQGCFNMHPLDRADDDGDASPIDPDHIGRYYLDPPCRAGETDQDTLPGAYPGDVATARYKLPSGLTCSRCILQMVYYTGNACKHPGYDEFDPVSVPDGCAPTKEDWVQTQLGMCGEDGRYPE--------EFWNCADIEITSDEDGGGPAPTTPSPTDEEELS-------PTPEPSVPTVEL---------------------------------------PRTPXXXXXXXXXXXSGME--------STPVPSVAPASPTATSCDDPAEVYEQCGGDDSYDGRTCCVENSECVELADCYSECRPAETTPEDNCSGEWG 490
BLAST of mRNA_H-elongata_contig7063.14724.1 vs. uniprot
Match: D8LD67_ECTSI (EsV-1-166 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD67_ECTSI) HSP 1 Score: 375 bits (962), Expect = 8.300e-115 Identity = 232/456 (50.88%), Postives = 271/456 (59.43%), Query Frame = 1
Query: 10 INYCPHCYQSRGPANVRARAESLTDPDELALYGNGAWPLLSVYERGEMASNGNYLEPDSISVRHGICGDPEQTSDESSNRYGNANSYYPVLETYTEGSVMEVKIVVSTTHNGHLEFFLCDTDDLDD-PDGAVTQGCFNMHPLDRAEDDGDASPIDPNYPGRYFLDPTCRSTETDQTILDGAFPGDVVTARYQLPSGVTCSRCIVQMAYYTGNSCMHPGYDDFNPTSWPSECAPNKEDWILTSLATCGDGDSYPE---GKRSRHRTNIGRSSAILILLPRTD-------GTVSDPAPAPTPESSTLAPIADEDPTTETFAPFAEMSTMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVYKHTVMPETPTPSAMKAEPFHEDAEPIAATLPPATFAPSVAATELPPDECDEQLAAYSQCGGDSYEGSSCCRPGYECTAVADCYSECRPIGGTCAEGWG 1344
INYCPHC+QSRGPA +RAR G+ WP + GE A NGNY+E D ++ RHG+CGDPEQT+ E SN+YG NS YPVLETY EG ++EVKIVVST H GH+E FLCD DDL D PD VTQ CFN +PLDRAEDD PIDP GR+ LDP CR++ETDQ +L GAF GDV TAR+QLP GVTC RC+VQMAYYTGNSC H GY +FNP SWPS CAP+K DWI ++ CGDGD+YPE T+ G P T ++P+PAPT P T XXXXXXXXXXXXXXXXXXXXXXXXXX P +T PD C++ + A++QCGG Y+GS+CCR GYEC +ADCYSECRP G C+EGWG
Sbjct: 51 INYCPHCFQSRGPAAIRARG------------GDQPWPHFN----GERAKNGNYIESDEVAQRHGVCGDPEQTAAEGSNKYGQENSNYPVLETYAEGGILEVKIVVSTYHWGHVEMFLCDADDLPDGPDSVVTQSCFNEYPLDRAEDDEFNGPIDPLNRGRFILDPPCRASETDQELLPGAFAGDVATARFQLPQGVTCERCVVQMAYYTGNSCKHQGYAEFNPPSWPSSCAPSKADWINEAVGQCGDGDAYPEEFWNCADVSITSDGGPXXXXXXXPETPQKPEAPVDEATEPSPAPTAVVEEYXXXXXXXXXXXHEEPMTPSPTTAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVSTD----------PD-CEDPVGAFAQCGGAGYDGSTCCRAGYECEKMADCYSECRPRGDRCSEGWG 479
BLAST of mRNA_H-elongata_contig7063.14724.1 vs. uniprot
Match: D7G4D7_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4D7_ECTSI) HSP 1 Score: 362 bits (930), Expect = 7.130e-112 Identity = 189/447 (42.28%), Postives = 235/447 (52.57%), Query Frame = 1
Query: 1 YEYINYCPHCYQSRGPANVRARAESLTDPDELALYGNGAWPLLSVYERGEMASNGNYLEPDSISVRHGICGDPEQTSDESSNRYGNANSYYPVLETYTEGSVMEVKIVVSTTHNGHLEFFLCDTDDLDDPDGAVTQGCFNMHPLDRAEDDGDASPIDPNYPGRYFLDPTCRSTETDQTILDGAFPGDVVTARYQLPSGVTCSRCIVQMAYYTGNSCMHPGYDDFNPTSWPSECAPNKEDWILTSLATCGDGDSYPEGKRSRHRTNIGRSSAILILLPRTDGTVSDPAPAPTPESSTLAPIADEDPTTETFAPFAEMSTMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVYKHTVMPETPTPSAMKAEPFHEDAEPIAATLPPATFAPSVAATELPPDECDEQLAAYSQCGGDSYEGSSCCRPGYECTAVADCYSECRPIGGTCAEGW 1341
+E + YCP CY +RGP V+ R TDP LA YG+G WPL YE+GEMA NGNYLE D I+ RHGICGDPEQ +E +N Y N +P+L TY EG V+E+K+ ++ H GH+EFF+C+ D+++DPDG Q CFN +PL RAE D + SPIDPNYPGRY++DP CR ETDQT +GA G V+ A YQLP G+TC RCI+QM YYTGNSC H GY++F P SWPS CAP K DWI CG+ SYPE + A + P DG +++P PAPT EP+A +C + + Y QCGG+ YEGS CCR GYECT +A CYS+CRPI G C+E W
Sbjct: 11 FERMEYCPSCYNARGPTYVKERGMVNTDPAVLAEYGDGEWPLRWAYEKGEMAENGNYLEKDEIAKRHGICGDPEQNEEEGANFYSTPNGDWPILNTYQEGQVLEIKLGMTAYHWGHVEFFICNADEMEDPDGIANQECFNNYPLTRAEGDDENSPIDPNYPGRYYVDPKCREGETDQTKPEGAQDGYVIHASYQLPEGLTCDRCILQMNYYTGNSCKHVGYEEFEPASWPSACAPEKHDWIELDRYLCGENGSYPEEFWA---------CADFAITP--DG-MANPTPAPT----------------------------------------------------------------------------------EPLA--------------------DCLDPVGPYDQCGGEDYEGSDCCREGYECTEMASCYSQCRPIPGGCSEDW 343
BLAST of mRNA_H-elongata_contig7063.14724.1 vs. uniprot
Match: D8LMF4_ECTSI (EsV-1-166 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMF4_ECTSI) HSP 1 Score: 367 bits (941), Expect = 2.300e-111 Identity = 229/479 (47.81%), Postives = 275/479 (57.41%), Query Frame = 1
Query: 10 INYCPHCYQSRGPANVRARAESLTDPDELALYGNGAWPLLSVYERGEMASNGNYLEPDSISVRHGICGDPEQTSDESSNRYGNANSYYPVLETYTEGSVMEVKIVVSTTHNGHLEFFLCDTDDLDD-PDGAVTQGCFNMHPLDRAEDDGDASPIDPNYPGRYFLDPTCRSTETDQTILDGAFPGDVVTARYQLPSGVTCSRCIVQMAYYTGNSCMHPGYDDFNPTSWPSECAPNKEDWILTSLATCGDGDSYPEGKRSRHRTNIGRSSAILILLPRTDGTVSDPAPAPTP----------------ESSTLAPIADEDPTTETFAP-----FAEMSTMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVYKHTVMPETPTPSAMKAEPFHEDAEPIAATLPPAT------------FAPSVAATELPPDECDEQLAAYSQCGGDSYEGSSCCRPGYECTAVADCYSECRPIGGTCAEGWG 1344
+N+CPHCYQSRGPA +R R+ G+ WP + +G A+NGNYLE D ++ RHGICGDPEQT+ E N+YG N YPVL TY EG V+EVKI+VST H GH+E FLCDT DL + D VTQ CFN +PLDRA DD PIDP Y GR+ LDP CR++ETDQ +++GA+PGDV TARYQLP GV C RC+VQM YYTGNSC H GY +FNP SWPS CAP+K DWI + CGDGD+YPE + I I SD P P E T AP+ F + ST XXXXXXXXXXXXXXXXXXXXXX V +M E + A L PAT FAPSV +C++ + A++QCGG+ Y+GS+CCR GYEC +A+CYSECRP C+EGWG
Sbjct: 58 VNFCPHCYQSRGPAAIRERS------------GDKPWP----HYQGARAANGNYLESDEVAQRHGICGDPEQTAAEGDNKYGRENYNYPVLGTYAEGGVLEVKILVSTYHWGHVEAFLCDTADLPEGEDSIVTQSCFNDYPLDRAIDDEFNGPIDPEYKGRFILDPPCRASETDQDLVEGAYPGDVATARYQLPEGVVCDRCVVQMVYYTGNSCKHEGYAEFNPESWPSSCAPSKADWINEVVGQCGDGDAYPE--------EFWNCADISIT--------SDGGPGTAPXXXXXXXXXXXXXXXEEEGTEAPMXXXXXXXXXXXXXXXXEFDDESTPXXXXXXXXXXXXXXXXXXXXXXEPTTPAPVEGDXXXXXXXXXXSMDGEDYXXXXXXXTAELEPATPMDSPTEPIVATFAPSVPPPISDHSDCEDPVGAFNQCGGEGYDGSTCCRAGYECEEMAECYSECRPKDDRCSEGWG 504
BLAST of mRNA_H-elongata_contig7063.14724.1 vs. uniprot
Match: A0A6H5KD35_9PHAE (CBM1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD35_9PHAE) HSP 1 Score: 335 bits (858), Expect = 3.440e-100 Identity = 228/478 (47.70%), Postives = 264/478 (55.23%), Query Frame = 1
Query: 10 INYCPHCYQSRGPANVRARAESLTDPDELALYGNGAWPLLSVYERGEMASNGNYLEPDSISVRHGICGDPEQTSDESSNRYGNANSYYPVLETYTEGSVMEVKIVVSTTHNGHLEFFLCDTDDLDD-PDGAVTQGCFNMHPLDRAEDDGDASPIDPNYPGRYFLDPTCRSTETDQTILDGAFPGDVVTARYQLPSGVTCSRCIVQMAYYTGNSCMHPGYDDFNPTSWPSECAPNKEDWILTSLATCGDGDSYPEGKRSRHRTNIGRSSAILILLPRTDGTVSDPAPAPTPESSTLAPIADEDPTTETFAP-----------------------FAEMSTMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVYKHTVMPETPTPSAMKAEPFHEDAEPIAATLPPATFAPSVAATELPPDECDEQLAAYSQCGGDSYEGSSCCRPGYECTAVADCYSE---------CRPIGGTCAEGWG 1344
INYCPHC+QSRGPA +RAR G+ WP + GE A NGNY+E D ++ RHG+CGDPEQT+ E SN+YG NS YPVLETY EG ++EVKIVVST H GH+E FLCD DDL D PD VTQ CFN HPLDRAEDD PIDP GR+ LDP CR++ETDQ ++ GAFPGDV TAR+QLP GVTC RC+VQMAY+ NSC H GY +FNP SWP CAP+K DWI ++ CGDGD+YPE + + I SD P E P E P M+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXX T A P EPI AT FAPSV +C++ + A GYEC +ADCYS+ CRP G C+EGWG
Sbjct: 22 INYCPHCFQSRGPAAIRARG------------GDQPWPHFN----GERAENGNYIESDEVAQRHGVCGDPEQTAAEGSNKYGQENSKYPVLETYAEGGILEVKIVVSTYHWGHVEMFLCDADDLPDGPDSVVTQSCFNEHPLDRAEDDEFNGPIDPLNRGRFILDPPCRASETDQELVPGAFPGDVATARFQLPQGVTCERCVVQMAYW--NSCKHQGYAEFNPPSWPGSCAPSKADWIKEAVGQCGDGDAYPE--------EFWNCADVSIT--------SDGGPXXXXXXXXXXXXESEAPVDELIEPTPXXXXXXXXXXXXXXXXXXXXXXXXMTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAELEPATPMDSPTEPIVAT-----FAPSVPPPVSTDPDCEDPVGAA----------------GYECEEMADCYSDVQRRQLVESCRPRGDRCSEGWG 444
BLAST of mRNA_H-elongata_contig7063.14724.1 vs. uniprot
Match: D8LM93_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM93_ECTSI) HSP 1 Score: 327 bits (837), Expect = 5.860e-99 Identity = 152/254 (59.84%), Postives = 182/254 (71.65%), Query Frame = 1
Query: 10 INYCPHCYQSRGPANVRARAESLTDPDELALYGNGAWPLLSVYERGEMASNGNYLEPDSISVRHGICGDPEQTSDESSNRYGNANSYYPVLETYTEGSVMEVKIVVSTTHNGHLEFFLCDTDDLDD-PDGAVTQGCFNMHPLDRAEDDGDASPIDPNYPGRYFLDPTCRSTETDQTILDGAFPGDVVTARYQLPSGVTCSRCIVQMAYYTGNSCMHPGYDDFNPTSWPSECAPNKEDWILTSLATCGDGDSYPE 768
INYCPHC+QSRGPA VRAR G+ WP + GE A NGNY+E + ++ RHGICGDPEQT+ ESSN+YG NS YPV ETY EG ++EVKIVVST H GH+E FLC+ +L PD VTQ CFN HPLDRA+DD P DP+ GR+ LDP CR++ETDQ +LDGA+P DV TAR++LP G++C RC+VQM YYTGNSC H GY +FNP SWPS CAP+K DWI + CGDGD+YPE
Sbjct: 54 INYCPHCFQSRGPAAVRARG------------GDKPWPHFN----GERAENGNYIESEEVARRHGICGDPEQTAAESSNKYGQENSNYPVRETYAEGGILEVKIVVSTYHWGHVEMFLCNAANLPGGPDSTVTQSCFNEHPLDRADDDEFNGPADPDNTGRFILDPPCRASETDQALLDGAYPSDVATARFKLPQGLSCERCVVQMVYYTGNSCKHQGYAEFNPPSWPSSCAPSKADWINEVVGQCGDGDAYPE 291
BLAST of mRNA_H-elongata_contig7063.14724.1 vs. uniprot
Match: D8LM92_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM92_ECTSI) HSP 1 Score: 338 bits (868), Expect = 1.340e-98 Identity = 171/302 (56.62%), Postives = 202/302 (66.89%), Query Frame = 1
Query: 10 INYCPHCYQSRGPANVRARAESLTDPDELALYGNGAWPLLSVYERGEMASNGNYLEPDSISVRHGICGDPEQTSDESSNRYGNANSYYPVLETYTEGSVMEVKIVVSTTHNGHLEFFLCDTDDLDD-PDGAVTQGCFNMHPLDRAEDDGDASPIDPNYPGRYFLDPTCRSTETDQTILDGAFPGDVVTARYQLPSGVTCSRCIVQMAYYTGNSCMHPGYDDFNPTSWPSECAPNKEDWILTSLATCGDGDSYPEGKRSRHRTNIGRSSAILILLPRTDGTVSDPAPAPTPESSTLAPIADED 912
INYCPHC+QSRGPA +RAR G+ WP + GE A NGNY+E + ++ RHGICGDPEQT+ E SN+YG NS YPVLETY EG ++E K+VVST H GH+E FLCD DDL PD VTQ CFN HPLDR +DD SPIDP+ GR+ LDP CR++ETDQ +LDGAFPGDV TAR++LP G+TC RC+VQM YYTGNSC H GY +FNP SWPS CAP K DWI + CGDGD+YPE + I I +DG DPAP+PT T AP A E+
Sbjct: 53 INYCPHCFQSRGPAAIRARG------------GDKPWPHFN----GERAENGNYIESEEVAQRHGICGDPEQTAAEDSNKYGLENSNYPVLETYAEGGILEFKMVVSTYHWGHVEMFLCDADDLPGGPDSTVTQSCFNEHPLDRVDDDDFNSPIDPSNTGRFILDPPCRASETDQEMLDGAFPGDVATARFKLPQGLTCERCVVQMVYYTGNSCKHQGYAEFNPESWPSSCAPTKADWINEVVGHCGDGDAYPE--------EFWNCADISIT---SDG---DPAPSPT-TVLTPAPTAPEE 323
BLAST of mRNA_H-elongata_contig7063.14724.1 vs. uniprot
Match: A0A6H5KTY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTY6_9PHAE) HSP 1 Score: 328 bits (841), Expect = 6.760e-93 Identity = 154/254 (60.63%), Postives = 182/254 (71.65%), Query Frame = 1
Query: 10 INYCPHCYQSRGPANVRARAESLTDPDELALYGNGAWPLLSVYERGEMASNGNYLEPDSISVRHGICGDPEQTSDESSNRYGNANSYYPVLETYTEGSVMEVKIVVSTTHNGHLEFFLCDTDDLDD-PDGAVTQGCFNMHPLDRAEDDGDASPIDPNYPGRYFLDPTCRSTETDQTILDGAFPGDVVTARYQLPSGVTCSRCIVQMAYYTGNSCMHPGYDDFNPTSWPSECAPNKEDWILTSLATCGDGDSYPE 768
INYCPHC+QSRG A VRAR G+ WP + G+ A+NGNY+E + ++ RHGICGDPEQT+ E SN YG NS YPVLETY EG ++E K+VVST H GH+E FLCD +DL PD VTQ CFN HPLDR +DD SPIDP+ GR+ LDP CR++ETDQ +LDGAFPGDV TAR++LP GV+C RC+VQM YYTGNSC H GY +FNP SWPS CAP K DWI + CGDGD+YPE
Sbjct: 53 INYCPHCFQSRGAAAVRARG------------GDQPWPHFN----GDRAANGNYIESEEVAQRHGICGDPEQTAAEGSNLYGLENSNYPVLETYAEGGILEFKMVVSTYHWGHVEMFLCDANDLPGGPDSTVTQSCFNEHPLDRVDDDYFNSPIDPSNTGRFILDPPCRASETDQELLDGAFPGDVATARFKLPEGVSCERCVVQMVYYTGNSCKHQGYAEFNPDSWPSSCAPTKADWINELVGFCGDGDAYPE 290
BLAST of mRNA_H-elongata_contig7063.14724.1 vs. uniprot
Match: D8LMS9_ECTSI (EsV-1-166 n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LMS9_ECTSI) HSP 1 Score: 311 bits (798), Expect = 1.720e-91 Identity = 189/483 (39.13%), Postives = 238/483 (49.28%), Query Frame = 1
Query: 10 INYCPHCYQSRGPANVRARAESLTDPDELALYGNGA-WPLLSVYERGEMASNGNYLEPDSISVRHGICGDPEQTSDESSNRYGNANSYYPVLETYTEGSVMEVKIVVSTTHNGHLEFFLCDTDDLDDPDGAVTQGCFNMHPLDRAEDDGDASPIDPNYPGRYFLDPTCRSTETDQTILDGAFPGDVVTARYQLPSGVTCSRCIVQMAYYTGNSCMHPGYDDFNPTSWPSECAPNKEDWILTSLATCGDGDSYPEGKRSRHRTNIGRSSAILILLPRTDGTVSDPAPAPTP------ESST---------------------LAPIADEDPTTETFA-------PFAEMST-------------MXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVYKHTVMPETPTPSAMKAEPFHEDAEPIAATLPPATFAPSVAATELPPDECDEQLAAYSQCGGDSYEGSSCCRPGYECTAVADCYSECRP 1314
+ +CPHCY +RGP V+ RA D L YG G +PL GE A NGNYLE + I+ RHG+CGDPEQ +DE +N Y AN + L+++T G V+E+ IV++ H GH EFF+C+TDD+DDPDG TQ CFNMHPL RA+DDGDASPIDPNYPGRY++DP CR ET+Q+ + G + RY LP + C CI+QM YYTGN+C H GY++FNPTSWPS CAPNK DWI CG YPE A +DG+ AP P P E ST L D D T F A M+T + +Y+ + PTP+ +EP E P++ D C E A+ QCGG ++EGS+CC GYEC A D YS+CRP
Sbjct: 46 VEFCPHCYNARGPKYVKQRAYDNVDSATLDAYGGGEEFPLYF----GEFADNGNYLETNEIAKRHGVCGDPEQNADEGTNVYSTANINWDPLDSFTSGQVLEMDIVMNAYHWGHCEFFVCNTDDMDDPDGVPTQECFNMHPLTRADDDGDASPIDPNYPGRYYVDPECREEETEQS--SNSIEGYNIKMRYVLPD-IECEHCILQMVYYTGNTCKHIGYEEFNPTSWPSSCAPNKWDWIELDRYVCGTRGQYPE-----------EFWACSDFSMTSDGSTPADAPMPDPVDEEDDEDSTDGGMEMYEYVGCYTDRQDDRILGDKLDSDLMTADFCYEYCSEIGAAYMATQYAFECFCSADEDLDYERHGTAMCDKACRGDEGETCGGENAFDLYRIMPSMDLPTPATPFSEPEPEPTTPVS-------------------DGCAE---AWGQCGGGNWEGSTCCMEGYECVANNDWYSQCRP 488
BLAST of mRNA_H-elongata_contig7063.14724.1 vs. uniprot
Match: D7FP25_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP25_ECTSI) HSP 1 Score: 287 bits (734), Expect = 1.540e-83 Identity = 196/401 (48.88%), Postives = 228/401 (56.86%), Query Frame = 1
Query: 148 EMASNGNYLEPDSISVRHGICGDPEQTSDESSNRYGNANSYYPVLETYTEGSVMEVKIVVSTTHNGHLEFFLCDTDDLDD-PDGAVTQGCFNMHPLDRAEDDGDASPIDPNYPGRYFLDPTCRSTETDQTILDGAFPGDVVTARYQLPSGVTCSRCIVQMAYYTGNSCMHPGYDDFNPTSWPSECAPNKEDWILTSLAT-CGDGDSYPEGKRSRHRTNIGRSSAILILLPRTDGTVSDPAPAPTPESSTLAPIADEDPTTETFAPFAEMSTMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVYKHTVMPETPTPSAMKAEPFHEDAEPIAATLPPATFAPSVAATELPPDECDEQLAAYSQCGGDSYEGSSCCRPGYECTAVADCYSECRPIGGTCAEGWG 1344
E NGNY++ D +T+ E SNRYG NS YPVLETY EG ++EVKIVV+T H GH+E FLCD DDL D PD VTQ CFN +PLDRAEDD SPIDP GR+ LDP CR++ETDQ +L GAF GDV TAR+QLP GVTC RC+VQM YYTGNSC H GY +FNP SWPS CAP+K DWI + CGDGD+YPE + + I SD P P ET A XXXXXXXXXXXXXXXXXXXXXXXXXXXXX + P+ C++ + A++QCGG Y+GS+CC GYEC +ADCYSECRP G C+E WG
Sbjct: 45 EPGGNGNYIQSD-------------ETAAEGSNRYGQENSNYPVLETYAEGGILEVKIVVATYHWGHVEMFLCDADDLPDGPDSVVTQSCFNEYPLDRAEDDEFNSPIDPLNRGRFILDPPCRASETDQELLPGAFAGDVATARFQLPQGVTCERCVVQMVYYTGNSCKHQGYAEFNPPSWPSSCAPSKADWINEIVGQHCGDGDAYPE--------EFWNCADVSIT--------SDGGPXXXXXXXXETPK-------ETKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVSTDPD-----------------------------------------CEDPVDAFAQCGGAGYDGSTCCTAGYECEEMADCYSECRPRGDGCSESWG 368 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7063.14724.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig7063.14724.1 >prot_H-elongata_contig7063.14724.1 ID=prot_H-elongata_contig7063.14724.1|Name=mRNA_H-elongata_contig7063.14724.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=432bp MASNGNYLEPDSISVRHGICGDPEQTSDESSNRYGNANSYYPVLETYTEGback to top mRNA from alignment at H-elongata_contig7063:3222..10566- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig7063.14724.1 ID=mRNA_H-elongata_contig7063.14724.1|Name=mRNA_H-elongata_contig7063.14724.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=7345bp|location=Sequence derived from alignment at H-elongata_contig7063:3222..10566- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig7063:3222..10566- >mRNA_H-elongata_contig7063.14724.1 ID=mRNA_H-elongata_contig7063.14724.1|Name=mRNA_H-elongata_contig7063.14724.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2592bp|location=Sequence derived from alignment at H-elongata_contig7063:3222..10566- (Himanthalia elongata Himel1 dioecious)back to top |