prot_H-elongata_contig704.14697.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig704.14697.1
Unique Nameprot_H-elongata_contig704.14697.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length393
Homology
BLAST of mRNA_H-elongata_contig704.14697.1 vs. uniprot
Match: A0A6H5JME8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JME8_9PHAE)

HSP 1 Score: 418 bits (1074), Expect = 3.960e-138
Identity = 227/452 (50.22%), Postives = 296/452 (65.49%), Query Frame = 0
Query:    1 LVVQGFSQIPGVDCGGTFAPVCRRQSIRMMLAIVTELDYEVHMLDVQTAFLNANAEEDVFVKITPGYETNDKSGVPLVMKLKKSLYGLRQSAKN---------------------CLYVYIYEDETGFAI-LTLYVDDILLLS----ASKTLLN---------------------------------KLKKKLMNRTITISQKDYTEDVVQRYGMKSGNPAYTPGVGPELSLNQPEEKLLNEEEKRRYQAITGAVMYLAQVTRYDILYAVNQLARAMSKPAKAHMGVAKHLLCYLAGSADFSITCKQGGFRLAVFSDANWDNSPASGRSTSSYIVILANAPISFKVGLKGLTAHSTIEAELVAAALTMKEAVVCSNMILELDFDESFGSVPLYIDNTSALHVAGNRTYGPRAKHIALRYFFVQELEEEGKISIHYVKTKDQLADLGTKHLSK 393
            +V QG++Q+PG+DCG T+APVCR QS+RM+  I  E +     +DV TAFL A+ +E+VFV+  PG+E  DK G  +VMKL KSLYGL QS  N                     C+Y+Y   D  G  I LTLYVDD+LL      A K LL+                                 K+++     T+TISQ+ Y + +++R+GM    P  TPG G E+S  QPE+ LL+E+E R+YQ I G++MY+AQV RYDI+YA  QLAR+M+KP+K HM  AKH L YLAG+ DFSIT K+GGF+LA FSD+NW N+P +G+STSSY+ +LANAP+SF+ GL+GLTA ST+EAELVA+AL MKEAV CSNM+ EL   + F  +P+Y DNT+ LH  GNR++  R KHIALR+FF++EL  EGKISIHYV T+D LAD+GTKH +K
Sbjct:  195 VVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVEFNLIFDQMDVSTAFLYADIQEEVFVEQPPGFEVKDKDGGDMVMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLY---DHNGAKIYLTLYVDDLLLAGNDSDAIKHLLSSGWKLGGIARQXGKLQKRFKMTDLGEASFALGMKIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARSMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGSGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVPTEDNLADIGTKHFNK 643          
BLAST of mRNA_H-elongata_contig704.14697.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE)

HSP 1 Score: 422 bits (1084), Expect = 3.720e-131
Identity = 224/439 (51.03%), Postives = 292/439 (66.51%), Query Frame = 0
Query:    1 LVVQGFSQIPGVDCGGTFAPVCRRQSIRMMLAIVTELDYEVHMLDVQTAFLNANAEEDVFVKITPGYETNDKSGVPLVMKLKKSLYGLRQSAKN---------------------CLYVYIYEDETGFAI-LTLYVDDILLLSASKTLLNKLKKKLMNR------------------------TITISQKDYTEDVVQRYGMKSGNPAYTPGVGPELSLNQPEEKLLNEEEKRRYQAITGAVMYLAQVTRYDILYAVNQLARAMSKPAKAHMGVAKHLLCYLAGSADFSITCKQGGFRLAVFSDANWDNSPASGRSTSSYIVILANAPISFKVGLKGLTAHSTIEAELVAAALTMKEAVVCSNMILELDFDESFGSVPLYIDNTSALHVAGNRTYGPRAKHIALRYFFVQELEEEGKISIHYVKTKDQLADLGTKHLSK 393
            +V QG++Q+PG+DCG T+APVCR QS+RM+  I  E +     +DV TAFL A+ +E+VFV+  PG+E  DK G  +VMKL KSLYGL QS  N                     C+Y+Y   D  G  I LTLYVDD+LL       ++ +K KL  R                        T+TISQ+ Y + +++R+G+    P  TPG G E+S  QPE+ LL+E+E R+YQ I G++MY+AQV RYDI+YA  QLAR M+KP+K HM  AKH L YLAG+ DFSIT K+GGF+LA FSD+NW N+P +G+STSSY+ +LANAP+SF+ GL+GLTA ST+EAELVA+AL M EAV  SNM+ EL F + F  +P+Y DNT+ LH  GNR++  R KHIALR+FF++EL  EGKISIHYV T+D LAD+GTKH +K
Sbjct: 1216 VVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVEFNLIFDQMDVSTAFLYADIQEEVFVEQPPGFEVKDKDGGDMVMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLY---DHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGISGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTVLANAPMSFRSGLQGLTAMSTMEAELVASALAMNEAVFFSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVPTEDNLADIGTKHFNK 1651          
BLAST of mRNA_H-elongata_contig704.14697.1 vs. uniprot
Match: A0A6H5L6R7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6R7_9PHAE)

HSP 1 Score: 399 bits (1025), Expect = 2.050e-129
Identity = 212/412 (51.46%), Postives = 281/412 (68.20%), Query Frame = 0
Query:    1 LVVQGFSQIPGVDCGGTFAPVCRRQSIRMMLAIVTELDYEVHMLDVQTAFLNANAEEDVFVKITPGYETNDKSGVPLVMKLKKSLYGLRQSAKNCLY-------------------VYIYEDETGFAILTLYVDDILLLSASKTLLNKLKKKLMNRTITISQKDYTEDVVQRYGMKSGNPAYTPGVGPELSLNQPEEKLLNEEEKRRYQAITGAVMYLAQVTRYDILYAVNQLARAMSKPAKAHMGVAKHLLCYLAGSADFSITCKQGGFRLAVFSDANWDNSPASGRSTSSYIVILANAPISFKVGLKGLTAHSTIEAELVAAALTMKEAVVCSNMILELDFDESFGSVPLYIDNTSALHVAGNRTYGPRAKHIALRYFFVQELEEEGKISIHYVKTKDQLADLGTKHLSK 393
            LV +G++Q+PG DCGGTFAPVCR QSIRM+ AI  E D +V  LDV+TAFL A+ EE+VFV++ PGYE  +   + LVMKL+KSL GL QS ++ L                    VYIY+      +LTLYVDD+L++                        +YT  ++ R+GM S  P  T G GPELS+ QPEE LLN E K+RYQAI G+VMYLAQVTRYDI+Y  +Q ARAMS P+K HMG AKHLL YL+GS DFSIT K+GGF L   S+AN  ++  +G+S SSYI++++ AP S K GL+ LTA ST+EAELVA+AL MKE + C+NM+ EL F   F S PL+ID+T+ L+V GN+T+    KH+ALR+F+++++ +EG+ISIHY+ T+D LAD+GT++L+K
Sbjct:  367 LVAKGWNQVPGRDCGGTFAPVCRLQSIRMVFAIAAEKDLDVIQLDVKTAFLYADIEENVFVEMAPGYEAKNMEELQLVMKLEKSLDGLAQSPQDWLKTIDSSLVEIGFFPLKSDTCVYIYDHNNTVVVLTLYVDDLLIIRGGAH---------------HQPGNYTTSILDRFGMGSCKPLSTAGFGPELSVKQPEETLLNAEGKQRYQAIIGSVMYLAQVTRYDIMYCASQFARAMSNPSKIHMGAAKHLLRYLSGSRDFSITYKRGGFDLTASSNANGGHNTDNGKSMSSYIMMMSTAPASLKSGLQSLTAMSTVEAELVASALAMKEVIFCTNMMKELGFGSEFSSAPLFIDSTATLNVIGNQTFSGHTKHMALRFFYIRKIVKEGRISIHYIPTEDNLADIGTEYLNK 763          
BLAST of mRNA_H-elongata_contig704.14697.1 vs. uniprot
Match: A0A6H5L5U2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5U2_9PHAE)

HSP 1 Score: 375 bits (962), Expect = 3.850e-124
Identity = 207/409 (50.61%), Postives = 266/409 (65.04%), Query Frame = 0
Query:   32 AIVTELDYEVHMLDVQTAFLNANAEEDVFVKITPGYETNDKS-GVPLVMKLKKSLYGLRQSAKN---------------------CLYVYIYEDETGFAI-LTLYVDDILLLSASKTLLNKLKKKLMNR------------------------TITISQKDYTEDVVQRYGMKSGNPAYTPGVGPELSLNQPEEKLLNEEEKRRYQAITGAVMYLAQVTRYDILYAVNQLARAMSKPAKAHMGVAKHLLCYLAGSADFSITCKQGGFRLAVFSDANWDNSPASGRSTSSYIVILANAPISFKVGLKGLTAHSTIEAELVAAALTMKEAVVCSNMILELDFDESFGSVPLYIDNTSALHVAGNRTYGPRAKHIALRYFFVQELEEEGKISIHYVKTKDQLADLGTKHLSK 393
            A   E +     +DV TAFL A+ +E+VFV+  PG+E  DK  G  +VMKL KSLYGL QS  N                     C+Y+Y   D  G  I LTLYVDD+LL       ++ +K KL  R                        T+TISQ+ Y + +++R+GM    P  TPG G E+S  QPE+ LL+E+E R+YQ I G++MY+AQV RYDI+YA  QLAR M+KP+K HM  AKH L YLAG+ DFSIT K+GGF+LA FSD+NW N+P +G+STSSY+ +LANAP+SF+ GL+GLTA ST+EAELVA+AL MKEAV CSNM+ EL F + F  +P+Y DNT+ LH  GNR++  R KHIALR+FF++EL  EGKISIHY  T+D LAD+GTKH +K
Sbjct:   17 APTVEFNLIFDQMDVSTAFLYADIQEEVFVEQPPGFEVKDKEDGGDMVMKLNKSLYGLAQSPGNWFNTIDPVIVEIGFVALKSDPCVYLY---DHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYFPTEDNLADIGTKHFNK 422          
BLAST of mRNA_H-elongata_contig704.14697.1 vs. uniprot
Match: A0A6H5KNH5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNH5_9PHAE)

HSP 1 Score: 383 bits (983), Expect = 7.600e-121
Identity = 210/438 (47.95%), Postives = 274/438 (62.56%), Query Frame = 0
Query:    1 LVVQGFSQIPGVDCGGTFAPVCRRQSIRMMLAIVTELDYEVHMLDVQTAFLNANAEEDVFVKITPGYETNDKSGVPLVMKLKKSLYGLRQSAKN---------------------CLYVYIYEDETGFAI-LTLYVDDILLLSASKTLLNKLKKKLMNR------------------------TITISQKDYTEDVVQRYGMKSGNPAYTPGVGPELSLNQPEEKLLNEEEKRRYQAITGAVMYLAQVTRYDILYAVNQLARAMSKPAKAHMGVAKHLLCYLAGSADFSITCKQGGFRLAVFSDANWDNSPASGRSTSSYIVILANAPISFKVGLKGLTAHSTIEAELVAAALTMKEAVVCSNMILELDFDESFGSVPLYIDNTSALHVAGNRTYGPRAKHIALRYFFVQELEEEGKISIHYVKTKDQLADLGTKHLS 392
            +V QG++Q+PG+DCG T+APVCR QS+RM+  I  + +     +D                            G  +VMKL KSLYGL QS  N                     C+Y+Y   D  G  I LTLYVDD+LL       ++ +K KL  R                        T+TISQ+ Y + +++R+GM    P  TPG G E+S  QPE+ LL+E+E R+YQ I G++MY+AQV RYDI+YA  QLAR M+KP+K HM  AKH L YLAG+ DFSIT K+GGF+LA FSD+NW N+P +G+STSSY+ +LANAP+SF+ GL+GLTA ST+EAELVA+AL MKEAV CSNM+ EL F + F  +P+Y DNT+ LH  GNR++  R KHIALR+FF++EL  EGKISIHYV+T+D LAD+GTKH +
Sbjct:  574 VVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVDFNLIFDQMD---------------------------DGGDMVMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLY---DHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLRMEIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVRTEDNLADIGTKHFN 981          
BLAST of mRNA_H-elongata_contig704.14697.1 vs. uniprot
Match: A0A6H5JG39_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG39_9PHAE)

HSP 1 Score: 348 bits (894), Expect = 3.080e-110
Identity = 186/396 (46.97%), Postives = 257/396 (64.90%), Query Frame = 0
Query:   25 QSIRMMLAIVTELDYEVHMLDVQTAFLNANAEEDVFVKITPGYETNDKSGVPLVMKLKKSLYGLRQSAKNCLY-------------------VYIYEDETGFAILTLYVDDILLLSASKTLLN--------KLKKKLMNRTITISQKDYTEDVVQRYGMKSGNPAYTPGVGPELSLNQPEEKLLNEEEKRRYQAITGAVMYLAQVTRYDILYAVNQLARAMSKPAKAHMGVAKHLLCYLAGSADFSITCKQGGFRLAVFSDANWDNSPASGRSTSSYIVILANAPISFKVGLKGLTAHSTIEAELVAAALTMKEAVVCSNMILELDFDESFGSVPLYIDNTSALHVAGNRTYGPRAKHIALRYFFVQELEEEGKISIHYVKTKDQLADLGTKHLSK 393
            QS+R++L I  E D  +  +DV  AFL A+ +EDV+V+  PG+E   ++G  LVM L+KSLY L QS  N  +                   VY Y+ +     LTL VDD+LL   +   L+        ++K+     T++IS++ Y++ ++ R+GM +  P  TPG+GP  S  QPEE LLN+EE RRYQ I G ++YL+Q+ RYDI+YA +QLAR M+KP+K HMG AK    YLAG+  F I  K+GGF+L  F+D+NW N+P +G+STSS++ +L +AP++FK GL+ LT  ST+E ELVAAAL +KEAV CSN++ EL F +    VPLY DNT+ LH  GNR+Y    KHIALR+FF++EL  EG+I+IHYV      AD+GTKHL+K
Sbjct:  310 QSVRVLLCITVEFDLIIVQMDVTAAFLYADIQEDVYVEQPPGFEVKGENGEDLVMLLQKSLYWLAQSPGNWFHTIDPFLISIGFVPLKPDPCVYFYDHDGSQMYLTLSVDDLLLAGNNSDALSIASLISGMEIKRDRERGTLSISREAYSKSILDRFGMSACKPTSTPGLGPGPSNVQPEETLLNQEETRRYQGIVGCLIYLSQILRYDIMYATSQLARPMAKPSKNHMGAAKRTFRYLAGTTYFKIPYKRGGFKLTAFTDSNWGNNPDNGKSTSSHLTMLCDAPMAFKSGLQSLTTQSTMEVELVAAALAIKEAVFCSNILTELGFGKELAQVPLYGDNTATLHSLGNRSYSSTTKHIALRFFFIRELVSEGRIAIHYVPADSNPADIGTKHLNK 705          
BLAST of mRNA_H-elongata_contig704.14697.1 vs. uniprot
Match: A0A6H5JF46_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF46_9PHAE)

HSP 1 Score: 321 bits (822), Expect = 1.120e-99
Identity = 187/439 (42.60%), Postives = 263/439 (59.91%), Query Frame = 0
Query:    1 LVVQGFSQIPGVDCGGTFAPVCRRQSIRMMLAIVTELDYEVHMLDVQTAFLNANAEEDVFVKITPGYETNDKS-GVPLVMKLKKSLYGLRQS---------------------AKNCLYVYIYEDETGFAILTLYVDDILLLSASKTLLNKLKKKLMNR------------------------TITISQKDYTEDVVQRYGMKSGNPAYTPGVGPELSLNQPEEKLLNEEEKRRYQAITGAVMYLAQVTRYDILYAVNQLARAMSKPAKAHMGVAKHLLCYLAGSADFSITCKQGGFRLAVFSDANWDNSPASGRSTSSYIVILANAPISFKVGLKGLTAHSTIEAELVAAALTMKEAVVCSNMILELDFDESFGSVPLYIDNTSALHVAGNRTYGPRAKHIALRYFFVQELEEEGKISIHYVKTKDQLADLGTKHLSK 393
            LV  G  Q  G   G  +APV R  SIRM+ AI  E  +EV+ LDV  AFLNA  + DV+V+  PG E  D + G  +V KL+KSLYGL QS                     +  C+Y+++  DE    IL +YVDDIL+   +K ++++ KK+LM+                         T+ ISQ  Y  D++QRYGM+  NP  TPG G ELS  QP+++LL  E+K+R+QAITG+++YLAQ TRYD+ YAV+QL RA + PA+ HM  AKHLL YL G+ D  I  K+G FRL+ F+D+++  +P +GRST+ Y+  L    IS+    + L A +T+EAEL A + + +EAV  SN + E+ F ++F SVP+  D+T AL VA N  +  R KHIALR+FF++EL +  +I++H+  +   LAD+ TKHL K
Sbjct:  284 LVAGGHRQRAGRHFGRNYAPVTRLGSIRMLFAIACEHGWEVYQLDVVAAFLNAYTDRDVYVRPAPGDEERDPTTGEMMVYKLEKSLYGLSQSPSLWNDAINDRLIIFGWQRTRSDPCVYIFVSGDE--LTILAIYVDDILITGGNKEIVSRKKKELMDSFEMTDMGEVKRVIGIEVQRDYEHGTLAISQGPYARDILQRYGMEQANPVSTPGYGVELSTEQPQDQLLGPEDKQRFQAITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGKFRLSCFTDSSFGANPDNGRSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGF-KTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFLRELTKGHRITLHHQPSATMLADIATKHLPK 719          
BLAST of mRNA_H-elongata_contig704.14697.1 vs. uniprot
Match: A0A6H5K129_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K129_9PHAE)

HSP 1 Score: 326 bits (835), Expect = 3.130e-98
Identity = 188/457 (41.14%), Postives = 267/457 (58.42%), Query Frame = 0
Query:    1 LVVQGFSQIPGVDCGGTFAPVCRRQSIRMMLAIVTELDYEVHMLDVQTAFLNANAEEDVFVKITPGYETNDKSGVPLVMKLKKSLYGLRQSAKNCLY-VYIYEDETGFAILT----LYVDDILLLSASKTLLNKLKKKLMNR-TITISQKDYTEDVVQRYGMKSGNPAYTPGVGPELSLNQPEEKLLNEEEKRRYQAITGAVMYLAQVTRYDILYAVNQLAR-----------------------AMSKPAKAHMGVAK-----------------------------------HLLCYLAGSADFSITCKQGGFRLAVFSDANWDNSPASGRSTSSYIVILANAPISFKVGLKGLTAHSTIEAELVAAALTMKEAVVCSNMILELDFDESFGSVPLYIDNTSALHVAGNRTYGPRAKHIALRYFFVQELEEEGKISIHYVKTKDQLADLGTKHLSK 393
            LV QG++Q+PG+ CG T+APVCR QSIRM+  I  + + E+  +DV TAFL  +  E+VFV+  PG+E  +K G  LVM+L++SLYGL QS  N  + +  +  E GF  L     +Y+  +  +   K +L    KK  NR T+TISQ+ Y++ +++R+GM    P  TPG G ELS  QPE+ LL+EEE RRYQ I G +MY+AQV RYD+++ +  +                         A SK      G+++                                     L Y+A    + +     G +LA FS++NW N+P +G+S+S Y+ +L NAP+SFK G++G TA ST+EAEL+A+AL MKEAV CSN++ EL   + F  VPLY DNT+ LH  GNR++  R KHIALR+F+++EL  EG+ISIHY+ T   +AD+GTKHL+K
Sbjct:  700 LVAQGWNQVPGLGCGSTYAPVCRLQSIRMLACIAVQFNLELDQIDVFTAFLYVDILENVFVEQPPGFEVKNKDGGDLVMQLQESLYGLAQSPSNWFHTIDPFLVEIGFVSLKSDTCVYLFKMTNMGEVKLVLGMDIKKDCNRGTLTISQEAYSKSILERFGMSECKPISTPGYGSELSNKQPEDTLLDEEETRRYQGIVGCLMYIAQVLRYDVMFKMTNMGEVKLVLGMDIKKDCNRGTLTISQEAYSKSILERFGMSECKPISTPGYGSELSNKQPEDTLLDEEETRRYQGIVGCLMYIAQVLRYDVI----GSKLATFSESNWANNPDNGKSSSCYLTMLGNAPVSFKSGIQGPTAMSTMEAELIASALAMKEAVFCSNILTELGLGKEFAQVPLYCDNTATLHALGNRSFSSRTKHIALRFFYIRELISEGRISIHYIPTDSNIADIGTKHLNK 1152          
BLAST of mRNA_H-elongata_contig704.14697.1 vs. uniprot
Match: A0A6H5KPN4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPN4_9PHAE)

HSP 1 Score: 303 bits (776), Expect = 2.800e-96
Identity = 162/320 (50.62%), Postives = 220/320 (68.75%), Query Frame = 0
Query:    1 LVVQGFSQIPGVDCGGTFAPVCRRQSIRMMLAIVTELDYEVHMLDVQTAFLNANAEEDVFVKITPGYETNDKSGVPLVMKLKKSLYGLRQSAKNCLYV---YIYEDET--GFAILTLYVDDILLLSASKTLLN-KLKKKLMNRTITISQKDYTEDVVQRYGMKSGNPAYTPGVGPELSLNQPEEKLLNEEEKRRYQAITGAVMYLAQVTRYDILYAVNQLARAMSKPAKAHMGVAKHLLCYLAGSADFSITCKQGGFRLAVFSDANWDNSPASGRSTSSYIVILANAPISFKVGLKGLTAHSTIEAELVAAALTMKEAVV 314
            LV QG++Q+PG+DCG T+APVCR QSIRM+  IV + + E+  +DV TAF  A+  E+VFV+  PG+E  DK G  LVM+L+KSLYGL Q A N  +    ++ E+ +    +   +Y+  +  +   K +L  ++K+     T+TISQK YT+ +++R+GM    P  TPG G ELS  QPE+ LL EEE RRYQ I G +MY+AQV RYDI+YA  QLAR M KP+K HM  AKH L Y+AG+ +F IT K  GF+LA FSD+NW N+P +G+STS Y+ +L N P+S K G++G TA ST+EAEL+A+AL MKEAV+
Sbjct:  115 LVAQGWNQVPGLDCGSTYAPVCRLQSIRMLACIVVQFNLELDQMDVSTAFFYADILENVFVERPPGFEVKDKDGGDLVMQLQKSLYGLAQIASNWFHTIDPFLVENISVPRKSDTCVYLFKMTDMGEVKLVLGMEIKRDHNQGTLTISQKAYTKSILERFGMSECKPTSTPGYGSELSNKQPEDTLLGEEETRRYQGIVGCLMYIAQVLRYDIMYATGQLARPMEKPSKIHMVAAKHTLRYVAGTTNFRITYKSEGFKLATFSDSNWANNPDNGKSTSCYLTMLGNTPVSLKSGIQGPTAMSTMEAELIASALAMKEAVL 434          
BLAST of mRNA_H-elongata_contig704.14697.1 vs. uniprot
Match: A0A6H5KBU1_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBU1_9PHAE)

HSP 1 Score: 314 bits (804), Expect = 9.490e-95
Identity = 181/392 (46.17%), Postives = 229/392 (58.42%), Query Frame = 0
Query:    2 VVQGFSQIPGVDCGGTFAPVCRRQSIRMMLAIVTELDYEVHMLDVQTAFLNANAEEDVFVKITPGYETNDKSGVPLVMKLKKSLYGLRQSAKNCLYVYIYEDETGFAILTLYVDDILLLSASKTLLNKLKKKLMNRTITISQKDYTEDVVQRYGMKSGNPAYTPGVGPELSLNQPEEKLLNEEEKRRYQAITGAVMYLAQVTRYDILYAVNQLARAMSKPAKAHMGVAKHLLCYLAGSADFSITCKQGGFRLAVFSDANWDNSPASGRSTSSYIVILANAPISFKVGLKGLTAHSTIEAELVAAALTMKEAVVCSNMILELDFDESFGSVPLYIDNTSALHVAGNRTYGPRAKHIALRYFFVQELEEEGKISIHYVKTKDQLADLGTKHLSK 393
            V   ++Q+PG D GGTFAPVCR QSIRM+LAI  E D +V  LDV+TAFL A+ EED       G  TN                                                                       SQ++Y   ++ R+GM S  P  T G GPELS                  AI G+V+YLAQ+TRYDI+Y  +QLARAMS P+K HMG AKHLL YL+GS DFSIT K+GGF L   SDANW N+P + +S SSYI++++ AP+SFK GL+ LTA ST+EAELVAAAL MKE + C+NM+ EL F   F S PLYI NT+ LHV GN+T+  R KH+ALR+F+++E+ +EG+ISIHY+ T+D LAD+GTKHL+K
Sbjct:  381 VTGRWNQVPGRDWGGTFAPVCRLQSIRMLLAIAAEKDLDVIQLDVKTAFLYADIEED-------GELTN-----------------------------------------------------------------------SQENYPNSILDRFGMGSWKPLSTAGFGPELS------------------AIIGSVIYLAQITRYDIMYCASQLARAMSNPSKIHMGAAKHLLRYLSGSRDFSITYKRGGFDLTALSDANWGNNPDNRKSMSSYIMMMSKAPVSFKFGLQSLTAMSTLEAELVAAALAMKETIFCTNMMKELGFGSEFRSAPLYI-NTATLHVIGNQTFSGRTKHVALRFFYIREIVKEGRISIHYIPTEDNLADIGTKHLNK 675          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig704.14697.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JME8_9PHAE3.960e-13850.22Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KJH6_9PHAE3.720e-13151.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L6R7_9PHAE2.050e-12951.46Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5L5U2_9PHAE3.850e-12450.61Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KNH5_9PHAE7.600e-12147.95Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JG39_9PHAE3.080e-11046.97Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JF46_9PHAE1.120e-9942.60Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K129_9PHAE3.130e-9841.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KPN4_9PHAE2.800e-9650.63Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KBU1_9PHAE9.490e-9546.17CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 1..92
e-value: 6.0E-25
score: 88.3
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 182..375
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 182..375

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig704contigH-elongata_contig704:569..1871 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig704.14697.1mRNA_H-elongata_contig704.14697.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig704 569..1871 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig704.14697.1 ID=prot_H-elongata_contig704.14697.1|Name=mRNA_H-elongata_contig704.14697.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=393bp
LVVQGFSQIPGVDCGGTFAPVCRRQSIRMMLAIVTELDYEVHMLDVQTAF
LNANAEEDVFVKITPGYETNDKSGVPLVMKLKKSLYGLRQSAKNCLYVYI
YEDETGFAILTLYVDDILLLSASKTLLNKLKKKLMNRTITISQKDYTEDV
VQRYGMKSGNPAYTPGVGPELSLNQPEEKLLNEEEKRRYQAITGAVMYLA
QVTRYDILYAVNQLARAMSKPAKAHMGVAKHLLCYLAGSADFSITCKQGG
FRLAVFSDANWDNSPASGRSTSSYIVILANAPISFKVGLKGLTAHSTIEA
ELVAAALTMKEAVVCSNMILELDFDESFGSVPLYIDNTSALHVAGNRTYG
PRAKHIALRYFFVQELEEEGKISIHYVKTKDQLADLGTKHLSK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like