mRNA_H-elongata_contig70115.14667.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig70115.14667.1 vs. uniprot
Match: A0A6H5L474_9PHAE (J domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L474_9PHAE) HSP 1 Score: 249 bits (637), Expect = 4.200e-79 Identity = 125/152 (82.24%), Postives = 140/152 (92.11%), Query Frame = 1
Query: 1 VLSDPNRRRQYDLSGGDEEAKGADYTPMDMEGIGSMGRVVGALIGKLGVPIQTSIAQSSLSEAYDICQNTGLTLDNPRLLPINYGQEYKGTVEKQQSMFFMLRVTEKVARDGLVLRCTSMNKSRFKLMMFDSAGKVRFQEESSSSTGREAYT 456
VLSDPNRRRQYDLSGGDEEAKGADYTPMDMEGIGSMGRVVGALIGKLGVPIQTSIAQSSLSEAY++CQN+GL NPRLLP+ G EYKGTVEKQQS+FFM+ VT+ +ARDGLVLRCTS NKSRFKL++FD+AGK R+QEESSS++ RE +T
Sbjct: 86 VLSDPNRRRQYDLSGGDEEAKGADYTPMDMEGIGSMGRVVGALIGKLGVPIQTSIAQSSLSEAYELCQNSGLNERNPRLLPMECGVEYKGTVEKQQSVFFMIHVTKDMARDGLVLRCTSTNKSRFKLVLFDNAGKARYQEESSSTSNREGFT 237
BLAST of mRNA_H-elongata_contig70115.14667.1 vs. uniprot
Match: A0A835ZFM4_9STRA (Heat shock protein 40 like protein/ DnaJ domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFM4_9STRA) HSP 1 Score: 147 bits (372), Expect = 1.040e-39 Identity = 79/153 (51.63%), Postives = 104/153 (67.97%), Query Frame = 1
Query: 1 VLSDPNRRRQYDLSGGDEEAKGADYTPMDMEGIGSMGRVVGALIGKLGVPIQTSIAQSSLSEAYDICQ-NTGLTLDNPRLLPINYGQEYKGTVEKQQSMFFMLRVTEKVARDGLVLRCTSMNKSRFKLMMFDSAGKVRFQEESSSSTGREAYT 456
VL DPN+RR YDLS +A +D+ +G +GRV GA+ GK+G+PI T+IAQ +L++A +ICQ GL DNP LLP+ G Y G V +QQ FF LRV+ +VA GL LRC S NKSRFKL++FD+ G VR+QEES+ S+ + YT
Sbjct: 70 VLLDPNKRRHYDLSMASPDAANH-LESIDLANMGQLGRVFGAMAGKMGIPIPTNIAQETLTKAQEICQLEPGLCEDNPHLLPLKLGVSYSGNVNRQQGAFFFLRVSAEVADMGLALRCASHNKSRFKLVVFDAKGGVRYQEESAKSSRSDKYT 221
BLAST of mRNA_H-elongata_contig70115.14667.1 vs. uniprot
Match: A0A024FV35_9STRA (J domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FV35_9STRA) HSP 1 Score: 122 bits (306), Expect = 2.290e-30 Identity = 66/142 (46.48%), Postives = 92/142 (64.79%), Query Frame = 1
Query: 1 VLSDPNRRRQYDLSGGDEEAKGADYTPMDMEGIGSMGRVVGALIGKLGVPIQTSIAQSSLSEAYDICQNTGLTLDNPRLLPINYGQEYKGTVEKQQSMFFMLRVTEKVARDGLVLRCTSMNKSRFKLMMFDSAGKVRFQEES 426
VLSDPN+RRQYDLSG E KG + +D+E +G GR+VGAL K+G+PI T I+QS LS A DIC T + + + +G E V+KQ + F+ + + A + LVL+C SM+KS+FKL++FD +G VR +ES
Sbjct: 63 VLSDPNKRRQYDLSG--ETGKGIEVESVDVEAMGGFGRMVGALFTKIGLPIPTQISQSVLSSARDICDERSNTSNKVHVTDLPFGVEKHSKVDKQDAHFYRIHLA--AANESLVLKCRSMSKSKFKLVLFDQSGGVRLVQES 200
BLAST of mRNA_H-elongata_contig70115.14667.1 vs. uniprot
Match: A0A8K1C4H2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C4H2_PYTOL) HSP 1 Score: 115 bits (289), Expect = 9.210e-28 Identity = 63/142 (44.37%), Postives = 90/142 (63.38%), Query Frame = 1
Query: 1 VLSDPNRRRQYDLSGGDEEAKGADYTPMDMEGIGSMGRVVGALIGKLGVPIQTSIAQSSLSEAYDICQNTGLTLDNPRLLPINYGQEYKGTVEKQQSMFFMLRVTEKVARDGLVLRCTSMNKSRFKLMMFDSAGKVRFQEES 426
VLSDPN+RRQYD++G E K ++ +D+E +G GRVVGAL K+G+PI T I+QS L+ A D+C + ++YG E VEKQ + F+ V E R+ +VL C S +KS+FKL++FD++G VR +ES
Sbjct: 66 VLSDPNKRRQYDVAG--ETGKDMEFESVDVESMGGFGRVVGALFTKIGLPIPTQISQSVLTAARDLCDERSNATQKEPVTAMSYGSERHARVEKQGAHFYRFTVEED--RESVVLMCRSASKSKFKLVLFDASGGVRMVQES 203
BLAST of mRNA_H-elongata_contig70115.14667.1 vs. uniprot
Match: A0A2D4BJI7_PYTIN (J domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BJI7_PYTIN) HSP 1 Score: 115 bits (288), Expect = 1.300e-27 Identity = 63/142 (44.37%), Postives = 90/142 (63.38%), Query Frame = 1
Query: 1 VLSDPNRRRQYDLSGGDEEAKGADYTPMDMEGIGSMGRVVGALIGKLGVPIQTSIAQSSLSEAYDICQNTGLTLDNPRLLPINYGQEYKGTVEKQQSMFFMLRVTEKVARDGLVLRCTSMNKSRFKLMMFDSAGKVRFQEES 426
VLSDPN+RRQYD++G E K A++ +D+E +G GRVVGAL K+G+PI T I+QS LS A D+C + + +G E V+KQ + F+ V E+ R+ +VL C S KS+FKL++FD++G VR +ES
Sbjct: 72 VLSDPNKRRQYDVAG--ESGKDAEFESVDVEAMGGFGRVVGALFTKIGLPIPTQISQSVLSAARDLCDERNHATHKVPVTALPFGVERHARVDKQDAHFYRFTVEEE--RESVVLMCRSATKSKFKLVLFDASGAVRVVQES 209
BLAST of mRNA_H-elongata_contig70115.14667.1 vs. uniprot
Match: A0A3F2RSJ1_9STRA (J domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RSJ1_9STRA) HSP 1 Score: 115 bits (287), Expect = 1.470e-27 Identity = 61/142 (42.96%), Postives = 91/142 (64.08%), Query Frame = 1
Query: 1 VLSDPNRRRQYDLSGGDEEAKGADYTPMDMEGIGSMGRVVGALIGKLGVPIQTSIAQSSLSEAYDICQNTGLTLDNPRLLPINYGQEYKGTVEKQQSMFFMLRVTEKVARDGLVLRCTSMNKSRFKLMMFDSAGKVRFQEES 426
+LSDPN+RRQYD++G E K ++ +D+E +G GRVVGAL K+G+PI T I+Q+ LS A D+C + P + + +G E V+KQ + F+ L+V + R+ +V C S+ KS+FKL++FDS G VR +ES
Sbjct: 65 ILSDPNKRRQYDVAG--ESGKDMEFESVDVEAMGGFGRVVGALFTKIGMPIPTQISQTVLSAARDLCDERNNSTQLPTVTQMVFGMERHAKVDKQDAHFYRLQVDKD--RESVVFMCRSVTKSKFKLVLFDSHGAVRMVQES 202
BLAST of mRNA_H-elongata_contig70115.14667.1 vs. uniprot
Match: A0A024G3N7_9STRA (J domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G3N7_9STRA) HSP 1 Score: 114 bits (286), Expect = 1.970e-27 Identity = 65/142 (45.77%), Postives = 89/142 (62.68%), Query Frame = 1
Query: 1 VLSDPNRRRQYDLSGGDEEAKGADYTPMDMEGIGSMGRVVGALIGKLGVPIQTSIAQSSLSEAYDICQNTGLTLDNPRLLPINYGQEYKGTVEKQQSMFFMLRVTEKVARDGLVLRCTSMNKSRFKLMMFDSAGKVRFQEES 426
VL DPN+RRQYDLS E K +Y +D+E +G +GRVVGAL K+G+ I T I+QS LS A D+C ++ + G E V+KQ + F+ +RV + A + LVL C S+ KS+FKL++FDS+G VR EES
Sbjct: 63 VLGDPNKRRQYDLSA--ESGKMVEYESVDVESMGGIGRVVGALFSKIGLSIPTQISQSVLSAARDLCDPRSTCTSKSNVVELAIGIEKNSKVDKQDAHFYRIRVDK--AGESLVLVCRSLVKSKFKLVLFDSSGGVRMVEES 200
BLAST of mRNA_H-elongata_contig70115.14667.1 vs. uniprot
Match: H3GKQ1_PHYRM (J domain-containing protein n=20 Tax=Peronosporaceae TaxID=4777 RepID=H3GKQ1_PHYRM) HSP 1 Score: 114 bits (286), Expect = 2.310e-27 Identity = 62/142 (43.66%), Postives = 91/142 (64.08%), Query Frame = 1
Query: 1 VLSDPNRRRQYDLSGGDEEAKGADYTPMDMEGIGSMGRVVGALIGKLGVPIQTSIAQSSLSEAYDICQNTGLTLDNPRLLPINYGQEYKGTVEKQQSMFFMLRVTEKVARDGLVLRCTSMNKSRFKLMMFDSAGKVRFQEES 426
VLSDPN+RRQYD++G + K ++ +D+E +G GRVVGAL K+G+PI T I+QS LS A D+C + + P + + +G E V+KQ + F+ L+V R+ +V C S +KS+FKL++FDS G VR +ES
Sbjct: 65 VLSDPNKRRQYDVAG--DSGKDLEFESVDVEAMGGFGRVVGALFTKIGMPIPTQISQSVLSAARDLCDSRNNSTQLPPVTQMVFGMERHAKVDKQDAHFYKLQVDRD--RESVVFMCRSASKSKFKLVLFDSHGAVRMVQES 202
BLAST of mRNA_H-elongata_contig70115.14667.1 vs. uniprot
Match: G4YJL4_PHYSP (J domain-containing protein n=2 Tax=Peronosporaceae TaxID=4777 RepID=G4YJL4_PHYSP) HSP 1 Score: 112 bits (281), Expect = 1.240e-26 Identity = 60/142 (42.25%), Postives = 90/142 (63.38%), Query Frame = 1
Query: 1 VLSDPNRRRQYDLSGGDEEAKGADYTPMDMEGIGSMGRVVGALIGKLGVPIQTSIAQSSLSEAYDICQNTGLTLDNPRLLPINYGQEYKGTVEKQQSMFFMLRVTEKVARDGLVLRCTSMNKSRFKLMMFDSAGKVRFQEES 426
VLSDPN+RRQYD++G + K ++ +D+E +G GRVVGAL K+G+PI T I+Q+ LS A D+C + P++ + +G E V+KQ + F+ L+V R+ +V C S +KS+FKL++FD G VR +ES
Sbjct: 65 VLSDPNKRRQYDVAG--DSGKDMEFESVDVESMGGFGRVVGALFTKIGMPIPTQISQTVLSAARDLCDERNNSTQLPQVTQMVFGMERHAKVDKQDAHFYKLQVDRD--RESVVFMCRSASKSKFKLVLFDQHGAVRMVQES 202
BLAST of mRNA_H-elongata_contig70115.14667.1 vs. uniprot
Match: UPI000C75E764 (chaperone protein dnaJ 15-like isoform X1 n=3 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C75E764) HSP 1 Score: 112 bits (280), Expect = 1.280e-26 Identity = 63/149 (42.28%), Postives = 93/149 (62.42%), Query Frame = 1
Query: 1 VLSDPNRRRQYDLSGGDEEAKGADYTPMDMEGIGSMGRVVGALIGKLGVPIQTSIAQSSLSEAYDICQNTGLT----LDNPRLLPINYGQEYKGTVEKQQSMFFMLRVTEKVARDGLVLRCTSMNKSRFKLMMFDSAGKVRFQEESSSS 435
VLSDPN++RQYD+ G EE AD +++E +G++GR+ GALI K G+P+ T I Q L+ A + GLT D P++ + +GQ GTVE+Q + FF + VTE ++G+++RC+S K +FK++ FD G V EES S
Sbjct: 62 VLSDPNKKRQYDIHG--EEGSVADLGSINVEDLGTVGRLFGALISKAGIPVPTEITQKVLTGAQHL--GKGLTDVPGFDVPKVEDLLWGQTVTGTVERQAAHFFRITVTEADLKNGVIIRCSSTGKDKFKIVFFDQEGHVTMVEESQQS 206 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig70115.14667.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig70115.14667.1 >prot_H-elongata_contig70115.14667.1 ID=prot_H-elongata_contig70115.14667.1|Name=mRNA_H-elongata_contig70115.14667.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=152bp VLSDPNRRRQYDLSGGDEEAKGADYTPMDMEGIGSMGRVVGALIGKLGVPback to top mRNA from alignment at H-elongata_contig70115:487..2916- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig70115.14667.1 ID=mRNA_H-elongata_contig70115.14667.1|Name=mRNA_H-elongata_contig70115.14667.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2430bp|location=Sequence derived from alignment at H-elongata_contig70115:487..2916- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig70115:487..2916- >mRNA_H-elongata_contig70115.14667.1 ID=mRNA_H-elongata_contig70115.14667.1|Name=mRNA_H-elongata_contig70115.14667.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=912bp|location=Sequence derived from alignment at H-elongata_contig70115:487..2916- (Himanthalia elongata Himel1 dioecious)back to top |