prot_H-elongata_contig6997.14642.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig6997.14642.1
Unique Nameprot_H-elongata_contig6997.14642.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length199
Homology
BLAST of mRNA_H-elongata_contig6997.14642.1 vs. uniprot
Match: D7FPE1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPE1_ECTSI)

HSP 1 Score: 205 bits (521), Expect = 6.290e-63
Identity = 104/164 (63.41%), Postives = 128/164 (78.05%), Query Frame = 0
Query:   32 LALAVKAGRPSASAFCVMAASIKN-IHVCTNKSCRKMGSRTTLDTFRALAPP-DVDVIESGCQGKCGLGPNVLTKPMEEVYSGVSQPVTAAAIIEIDFAYAVPDALLGAFASVPEGDILYQRGLHVDALACYNKCINTRGAFDKNANALSVVKVKQSSAMRKVA 193
            L +AV    P+A AFC  + S K  +HVCTN SCRK GSR T+DTFRA APP D+ V+E+GCQG+CGLGPN+LT+P EEVY+GV+QP T AAIIEIDF   V D L+GAF  V +GD+L++RGL  +ALACYN+CI+T GAF+ + NALSV KVKQSSAMR +A
Sbjct:   20 LFMAVSPAAPAAVAFCSSSMSTKGTVHVCTNTSCRKAGSRWTVDTFRAFAPPGDIKVLETGCQGRCGLGPNILTRPSEEVYNGVAQPATVAAIIEIDFGVPVADTLVGAFGHVSKGDVLFKRGLFAEALACYNQCIDTAGAFEGSTNALSVAKVKQSSAMRLLA 183          
BLAST of mRNA_H-elongata_contig6997.14642.1 vs. uniprot
Match: A0A7S2V0W4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0W4_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 1.050e-18
Identity = 43/113 (38.05%), Postives = 68/113 (60.18%), Query Frame = 0
Query:   53 IKNIHVCTNKSCRKMGSRTTLDTFRALAPPDVDVIESGCQGKCGLGPNVLTKPMEEVYSGVSQPVTAAAIIEIDFAYAVPDALLGAFASVPEGDILYQRGLHVDALACYNKCI 165
            I++I +C N++CRK G+  T + F A+ PP++ +  +GCQGKCG GPNV  +P  + Y+GV QP T AAI+EI     V D ++  +    + D L ++     AL  Y++ +
Sbjct:   21 IQSISICNNRNCRKDGASETYEVFEAMTPPEMQISFTGCQGKCGSGPNVRVEPGAKDYAGVHQPATVAAILEIALGVVVDDVVVERYTDKMKADKLLKQRQPKKALEMYSQAL 133          
BLAST of mRNA_H-elongata_contig6997.14642.1 vs. uniprot
Match: UPI0009C00CAB (uncharacterized protein LOC18437633 isoform X2 n=1 Tax=Amborella trichopoda TaxID=13333 RepID=UPI0009C00CAB)

HSP 1 Score: 73.9 bits (180), Expect = 1.280e-12
Identity = 34/73 (46.58%), Postives = 44/73 (60.27%), Query Frame = 0
Query:   53 IKNIHVCTNKSCRKMGSRTTLDTFRALAPPDVDVIESGCQGKCGLGPNVLTKPMEEVYSGVSQPVTAAAIIEI 125
            +K I VC NKSCRK+GSR TL+    LAPP++ V    C G+CG GPN++  P EE  S    P   A ++ I
Sbjct:   43 VKEIRVCLNKSCRKLGSRETLELMSDLAPPEISVKSCSCLGRCGSGPNLVLLPAEEFVSHCDTPAKIADLLAI 115          
BLAST of mRNA_H-elongata_contig6997.14642.1 vs. uniprot
Match: W1PQI6_AMBTC (Uncharacterized protein n=1 Tax=Amborella trichopoda TaxID=13333 RepID=W1PQI6_AMBTC)

HSP 1 Score: 73.9 bits (180), Expect = 1.730e-12
Identity = 34/73 (46.58%), Postives = 44/73 (60.27%), Query Frame = 0
Query:   53 IKNIHVCTNKSCRKMGSRTTLDTFRALAPPDVDVIESGCQGKCGLGPNVLTKPMEEVYSGVSQPVTAAAIIEI 125
            +K I VC NKSCRK+GSR TL+    LAPP++ V    C G+CG GPN++  P EE  S    P   A ++ I
Sbjct:   43 VKEIRVCLNKSCRKLGSRETLELMSDLAPPEISVKSCSCLGRCGSGPNLVLLPAEEFVSHCDTPAKIADLLAI 115          
BLAST of mRNA_H-elongata_contig6997.14642.1 vs. uniprot
Match: R0I0F3_9BRAS (Uncharacterized protein n=6 Tax=Camelineae TaxID=980083 RepID=R0I0F3_9BRAS)

HSP 1 Score: 71.6 bits (174), Expect = 9.590e-12
Identity = 37/91 (40.66%), Postives = 52/91 (57.14%), Query Frame = 0
Query:   53 IKNIHVCTNKSCRKMGSRTTLDTFRALAPPDVDVIESGCQGKCGLGPNVLTKPMEEVYSGVSQPVTAAAII--------EIDFAYAVPDAL 135
            +K I VCTN++CR+ GS   L+T  ALAPP++ V  SGC G+CG GPN++  P   +    + P  AA I+        E   ++ V DAL
Sbjct:   18 VKEIRVCTNRTCRRQGSFQILETLTALAPPELRVTPSGCLGRCGAGPNLVALPQGLILRHCATPSRAAEILFSLCGDGREASSSFVVTDAL 108          
BLAST of mRNA_H-elongata_contig6997.14642.1 vs. uniprot
Match: A0A7S3B8R8_9VIRI (Hypothetical protein (Fragment) n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3B8R8_9VIRI)

HSP 1 Score: 71.6 bits (174), Expect = 1.520e-11
Identity = 36/66 (54.55%), Postives = 42/66 (63.64%), Query Frame = 0
Query:   58 VCTNKSCRKMGSRTTLDTFRALAPPDVDVIESGCQGKCGLGPNVLTKPMEEVYSGVSQPVTAAAII 123
            VCTNK+CRK GSR+TL  F ALAP DV V  +GC GKCG GPNV+  P       VS    AA ++
Sbjct:  131 VCTNKACRKQGSRSTLAAFEALAPEDVTVQSTGCLGKCGAGPNVVLCPSGLKVGHVSTAAHAARLL 196          
BLAST of mRNA_H-elongata_contig6997.14642.1 vs. uniprot
Match: A0A061S794_9CHLO (Tetratricopeptide repeat-containing protein isoform 3 n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061S794_9CHLO)

HSP 1 Score: 71.2 bits (173), Expect = 1.620e-11
Identity = 45/110 (40.91%), Postives = 58/110 (52.73%), Query Frame = 0
Query:   56 IHVCTNKSCRKMGSRTTLDTFRALAPPDVDVIESGCQGKCGLGPNVLTKPMEEVYSGVSQPVTAAAIIEIDFAYAVPDALLGAFASVPEGDILYQRGLHVDALACYNKCI 165
            + VCTN++CRK G++  L   + L   +V VIESGC GKCG GPNV   P   V   VS P   A I+      AV DA+L A      G  L   G    A++C+N+ I
Sbjct:   44 VRVCTNRTCRKQGAKQILRLTQDLCIENVKVIESGCMGKCGNGPNVGILPPGVVLGHVSTPRLLARILSELCDVAVDDAVLKATELRLRGTSLANAGDLQGAISCWNEAI 153          
BLAST of mRNA_H-elongata_contig6997.14642.1 vs. uniprot
Match: A0A087HAE3_ARAAL (Uncharacterized protein n=2 Tax=Arabis TaxID=50451 RepID=A0A087HAE3_ARAAL)

HSP 1 Score: 70.5 bits (171), Expect = 2.550e-11
Identity = 38/92 (41.30%), Postives = 53/92 (57.61%), Query Frame = 0
Query:   52 SIKNIHVCTNKSCRKMGSRTTLDTFRALAPPDVDVIESGCQGKCGLGPNVLTKPMEEVYSGVSQPVTAAAII--------EIDFAYAVPDAL 135
            S+K + VCTN++CRK GS   L+T  +LAPPD+ V  +GC G+CG GPN++  P   +    + P  AA I+        E   + AV DAL
Sbjct:   17 SVKELRVCTNRTCRKQGSFQILETLTSLAPPDLRVSPTGCLGRCGSGPNLVALPQGLLLRHCATPSRAAEIMLSLCGDGREASSSSAVTDAL 108          
BLAST of mRNA_H-elongata_contig6997.14642.1 vs. uniprot
Match: A0A388M9V0_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388M9V0_CHABU)

HSP 1 Score: 72.0 bits (175), Expect = 3.060e-11
Identity = 40/119 (33.61%), Postives = 61/119 (51.26%), Query Frame = 0
Query:   48 VMAASIKNIHVCTNKSCRKMGSRTTLDTFRALAPPDVDVIESGCQGKCGLGPNVLTKPMEEVYSGVSQPVTAAAIIEIDFAYAVPDALLGAFASVPEGDILYQRGLHVDALACYNKCIN 166
            V ++ +  I VC+N++CRK GS TTL   R L PPDV V   GC G+CG GPN++  P   + +  +  V  A ++E     + PD  L A     +G +    G    A   +++ I+
Sbjct:  453 VTSSRVGEIRVCSNRTCRKEGSATTLQLLRDLCPPDVSVDTCGCLGRCGSGPNLVLVPTGMIINHCNSAVHVARLLERQCGVSDPDTNLRALDLNNQGTVALDNGDVARACDLFSQAIS 571          
BLAST of mRNA_H-elongata_contig6997.14642.1 vs. uniprot
Match: A0A2G5CVZ4_AQUCA (Uncharacterized protein n=2 Tax=Aquilegia coerulea TaxID=218851 RepID=A0A2G5CVZ4_AQUCA)

HSP 1 Score: 70.1 bits (170), Expect = 4.820e-11
Identity = 32/68 (47.06%), Postives = 41/68 (60.29%), Query Frame = 0
Query:   56 IHVCTNKSCRKMGSRTTLDTFRALAPPDVDVIESGCQGKCGLGPNVLTKPMEEVYSGVSQPVTAAAII 123
            I VC NK+CRK GSR TL+   +LAPP V VI  GC GKCG GPN++  P     +  + P   A ++
Sbjct:   49 IRVCVNKTCRKQGSRETLEILSSLAPPHVSVISCGCLGKCGSGPNLVFLPQAVFVNHCATPARTAQVL 116          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6997.14642.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPE1_ECTSI6.290e-6363.41Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2V0W4_9STRA1.050e-1838.05Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
UPI0009C00CAB1.280e-1246.58uncharacterized protein LOC18437633 isoform X2 n=1... [more]
W1PQI6_AMBTC1.730e-1246.58Uncharacterized protein n=1 Tax=Amborella trichopo... [more]
R0I0F3_9BRAS9.590e-1240.66Uncharacterized protein n=6 Tax=Camelineae TaxID=9... [more]
A0A7S3B8R8_9VIRI1.520e-1154.55Hypothetical protein (Fragment) n=1 Tax=Prasinoder... [more]
A0A061S794_9CHLO1.620e-1140.91Tetratricopeptide repeat-containing protein isofor... [more]
A0A087HAE3_ARAAL2.550e-1141.30Uncharacterized protein n=2 Tax=Arabis TaxID=50451... [more]
A0A388M9V0_CHABU3.060e-1133.61Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
A0A2G5CVZ4_AQUCA4.820e-1147.06Uncharacterized protein n=2 Tax=Aquilegia coerulea... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10coord: 53..132
e-value: 7.7E-10
score: 40.8
NoneNo IPR availablePANTHERPTHR47682FAMILY NOT NAMEDcoord: 46..128
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..50
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 21..32
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 33..50
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 51..199
NoneNo IPR availableTMHMMTMhelixcoord: 21..43
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 55..115

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig6997contigH-elongata_contig6997:609..3369 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig6997.14642.1mRNA_H-elongata_contig6997.14642.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig6997 462..3369 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig6997.14642.1 ID=prot_H-elongata_contig6997.14642.1|Name=mRNA_H-elongata_contig6997.14642.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=199bp
MSLRDNQRPSPARYRLWRTTIFAAIITTPSFLALAVKAGRPSASAFCVMA
ASIKNIHVCTNKSCRKMGSRTTLDTFRALAPPDVDVIESGCQGKCGLGPN
VLTKPMEEVYSGVSQPVTAAAIIEIDFAYAVPDALLGAFASVPEGDILYQ
RGLHVDALACYNKCINTRGAFDKNANALSVVKVKQSSAMRKVANNMREG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036249Thioredoxin-like_sf