prot_H-elongata_contig69770.14625.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig69770.14625.1
Unique Nameprot_H-elongata_contig69770.14625.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length324
Homology
BLAST of mRNA_H-elongata_contig69770.14625.1 vs. uniprot
Match: D7FY65_ECTSI (AAA_12 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY65_ECTSI)

HSP 1 Score: 250 bits (639), Expect = 3.970e-74
Identity = 151/323 (46.75%), Postives = 212/323 (65.63%), Query Frame = 0
Query:    1 DLSASFERLSL-AKSDVTIPLLTSYASLSGVSIAGPCVKVGEFVPKANPIPDSYGSTRDYLKAMQAHTQVEFTASIKEGVASAHRKEGGGWISCTCKCGRDCTGPTHVFDLNGTPHPNNDFGSCD---DGHNFNNETWARHIVQIEGQALPALVVTCKCTSSYHRATLWMSL-PEGVTCARYKSSIRMRSLGYVGPFLREYGSAARLLQGNVGSSLLLKTVSAPGRKKGCPSTEGS--FVPANAIDKLEASQVPLNVAQRDAVLNLTGGLDIIVGPPGTGKSTTIYYIIDARVDKNARILVTSIRNQAVDAVSAKVSGFGVLV 316
            DL+ +  R+S+ A S++ IP L++++S   V++AG  V+VGE VP A  IP ++ +   YLKAMQAHTQ EF AS ++GV++A R +GGGW+  TC+           + ++G    N   G+ D   DGHNF  + W+RH+V+ E  ++ ALVV C    + + A L ++   +G+         R+RSLGYVG FLREYGSAA LL+ +   SLL   V+APG++   PS+ G+  F+P   +  L+ S VPLN  Q+DAVL+LTGGLD++VGPPGTGKSTTIY+I ++R+    R+L+TSIRNQAVDAV+ KV  FGVLV
Sbjct:   31 DLTRAMGRMSVRATSNIRIPPLSAFSS-GAVAVAGSAVRVGECVPPAEDIPTNFRTPTAYLKAMQAHTQKEFEASARQGVSNADR-QGGGWLVLTCRPNPRWQDSRLSYYVHGKSE-NGGLGTRDTEEDGHNFKQDPWSRHLVEFEDSSI-ALVVACGEGVTDNEAFLAITPGTDGIPVRSEHLHTRVRSLGYVGSFLREYGSAAELLRRDESDSLL-NAVAAPGQQCTLPSSSGAGTFLPRGQVRTLDTSSVPLNATQKDAVLSLTGGLDLVVGPPGTGKSTTIYHINESRIRAEGRVLITSIRNQAVDAVTEKVDSFGVLV 348          
BLAST of mRNA_H-elongata_contig69770.14625.1 vs. uniprot
Match: A0A6H5JRT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRT8_9PHAE)

HSP 1 Score: 140 bits (353), Expect = 1.720e-33
Identity = 102/257 (39.69%), Postives = 153/257 (59.53%), Query Frame = 0
Query:    1 DLSASFERLSL-AKSDVTIPLLTSYASLSGVSIAGPCVKVGEFVPKANPIPDSYGSTRDYLKAMQAHTQVEFTASIKEGVASAHRKEGGGWISCTCKCGRDCTGPTHVFD---LNGTPHPNNDFGSCD------DGHNFNNETWARHIVQIEGQALPALVVTCKCTSSYHRATLWMSLP--EGVTCARYKSSIRMRSLGYVGPFLREYGSAARLLQGNVGSSLLLKTVSAPGRKKGCPSTEGS--FVPANAIDKLEA 243
            DL+ +  R+S+ A S++ IP L++++S   V++AG  V+VGE +P+A  IP ++ +   YLKAMQAHTQ EF AS ++GV++A R +GGGW+  TC+       P   +    L+   H  ++ G  D      DGHNF  + W+RH+V+ E  ++ ALVV C    + ++A L + +P  +G+         R+RSLGYVG FLREYGSAA LL+ +   SLL   V+APG+    PS+ G+  F+P   +   EA
Sbjct:   31 DLTRAMGRMSVRATSNIRIPPLSAFSS-GAVAVAGSAVRVGECIPRAESIPTNFRTPTAYLKAMQAHTQKEFEASARQGVSNADR-QGGGWLLLTCR-------PNPRWQDSCLSYYVHGKSENGGLDTQDTEEDGHNFKQDPWSRHLVEFEDSSI-ALVVACVEGVTDNQAFLAI-VPGADGIPVLSEHLQTRVRSLGYVGSFLREYGSAAELLRRDESDSLL-NAVAAPGQCT-LPSSSGAGTFLPRGQVFGNEA 274          
BLAST of mRNA_H-elongata_contig69770.14625.1 vs. uniprot
Match: A0A2P6TVU4_CHLSO (DNA helicase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TVU4_CHLSO)

HSP 1 Score: 132 bits (332), Expect = 6.410e-31
Identity = 106/282 (37.59%), Postives = 149/282 (52.84%), Query Frame = 0
Query:   49 IPDSYGSTRDYLKAMQAHTQVEFTASIKEGVASAHRKEG----GGWISCTCKCGRDCTGPTHVFDLNGTPHPNNDFGSCDDGHNFNNETWARHIVQIEGQALPALVVTCKCTSSYHRATLWMSLPEGVTCARYKSSIRMRSLGYVGPFLREYGSAARLLQGNVGSSL------LLKTVSAPGR--KKGCPSTEGSFVPANAIDKLEASQVPLNVAQRDAVLNLTGGLDIIVGPPGTGKSTTIYYIIDARVDKNARILVTSIRNQAVDAVSAKVSGF--GVLV 316
            +PD++ S   YL AMQ+   +EF ASI++ +  A R++      GW     +  R  +G + + D  G  H    F     G +F  ++W RH+VQ+       L +  K           M+L   V C+    S  MR+LG+VGPFL +Y +A  L      S+L      LL  V  P     +G  ST    +PA A  +L   +VP+N +QR AV  L GGL+II GPPGTGKSTTI+++IDA V  +A++LVT  RNQAVD+V  KV+    G+LV
Sbjct:  101 LPDAFSSDGAYLDAMQSTAALEFQASIRQALEQAEREQRRTGVSGWHEFVPQRSRR-SGGSLLLD-GGESHGTWVFAGHT-GVDFEQDSWGRHLVQVRETGSFHLAIMAKQDDETQEHV--MALLPTVECS---GSASMRTLGFVGPFLAQYEAAQGLRYSLHCSTLPDRTRQLLAAVVRPSTLYSRGAAST---LLPAGA--RLRTDEVPINASQRAAVEALRGGLNIIHGPPGTGKSTTIFHLIDAGVQPDAQVLVTCTRNQAVDSVVDKVARLEGGILV 369          
BLAST of mRNA_H-elongata_contig69770.14625.1 vs. uniprot
Match: E1ZLN5_CHLVA (Expressed protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZLN5_CHLVA)

HSP 1 Score: 122 bits (305), Expect = 4.470e-27
Identity = 102/299 (34.11%), Postives = 135/299 (45.15%), Query Frame = 0
Query:   38 KVGEFVPKANPIPDSYGSTRDYLKAMQAHTQVEFTASIKEGVASAHRKE--------GGGWISCTCKCGRDCTGPTHVFDLNGTPHPNNDFGSCDDGHNFNNETWARHIVQIEGQALPALVVTCKCTSSYHRATL-----------WMSLPEGVTCARYKSSIRMRSLGYVGPFLREYGSAARLLQGNVGSSL------LLKTVSAPGRKKGCPSTEGSFVPANAIDKLEASQVPLNVAQRDAVLNLTGGLDIIVGPPGTGKSTTIYYIIDARVDKNARILVTSIRNQAVDAVSAKVSG 311
            K GE    A  +PD + S   YL  MQAHT +EF A+    +ASA  +           GW+S          G +  F   G P                   W +H+VQ+            K T SYH A L            + LP      R +  ++MRSLGY+G FL +Y SA  L       +L      +L+  + P R+    S+ G          L    VP+N  QR AV  L GGL II GPPGTGKSTTI++I+++RV   A++LVT  RNQAVDAV  K++G
Sbjct:   65 KAGE----AAALPDVHASPEAYLTDMQAHTALEFQAAAAAALASAEGRHPEPAQLWWNFGWVSDAKWRALRTRGQSLDFSDEGEP-------------------WVKHLVQV------------KETDSYHVARLARRDPDSGDDVLVLLPTVEAGGRAREVVQMRSLGYLGSFLLQYTSAQALRYQLRTRTLPPAAQHMLQLAADPTRQL---SSSGQGTLRRGPVHLLTDTVPINAGQRAAVEGLQGGLSIIHGPPGTGKSTTIFHIVESRVQPRAQVLVTCSRNQAVDAVVGKLAG 325          
BLAST of mRNA_H-elongata_contig69770.14625.1 vs. uniprot
Match: A0A7S0QYL2_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0QYL2_9CHLO)

HSP 1 Score: 83.6 bits (205), Expect = 8.240e-16
Identity = 57/164 (34.76%), Postives = 87/164 (53.05%), Query Frame = 0
Query:  170 EGVTCARYKSSIRMRS-------LGYVGPFLREYGSAARLLQGNVGSSLLLKTVSAPGRKKGCPSTEGSFVPANAIDKLEASQVPLNVAQRDAVLNLTGGLDIIVGPPGTGKSTTIYYIIDARVDKNARILVTSIRNQAVDAVSAKVSGFG----VLVSSFHRM 322
             GV   R K  ++ RS       LGYVG ++ EY +   L       + +L+++  P          G +   N  D      VP+N +QR+AV NL   L+ I GPPGTGKSTTI++II AR+    R+LVT  RN AV++++ K++ F     ++V + H++
Sbjct:    3 SGVLVVRIKPPLQDRSSNGTFLNLGYVGSYITEYNAILELSSSREPETPVLRSILQPAH-----DIPGDYE-TNGYDPT----VPINRSQREAVDNLQDALEKIQGPPGTGKSTTIFHIITARLPTQERVLVTCDRNVAVESIAQKLAPFVGDKMLVVGNLHKI 156          
BLAST of mRNA_H-elongata_contig69770.14625.1 vs. uniprot
Match: A0A813JMW8_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813JMW8_POLGL)

HSP 1 Score: 85.1 bits (209), Expect = 1.900e-14
Identity = 52/132 (39.39%), Postives = 79/132 (59.85%), Query Frame = 0
Query:  182 RMRSLGYVGPFLREYGSAARLLQGNVGSSLLLKTVSAPGRKKGCPSTE--GSFVPANAIDKLEASQVPLNVAQRDAVLNLTGGLDIIVGPPGTGKSTTIYYIIDARVDKNARILVTSIRNQAVDAVSAKVSG 311
            +++SLGYVG FL E+ +   L        +  + ++ P R    P  +  GS+    A   + A+ VP+N +QR A+  L   L+ I GPPGTGKSTTI++++DARV    R+LVT  RN AV++++ K+SG
Sbjct: 1279 QVKSLGYVGSFLAEFSAILEL------RGMQPRDMTGPMRAILEPKVDLPGSY----ANRPINAAAVPVNPSQRTAIEGLRHALEKIQGPPGTGKSTTIFHVLDARVPAGQRVLVTCSRNVAVESIAQKLSG 1400          
BLAST of mRNA_H-elongata_contig69770.14625.1 vs. uniprot
Match: A0A813J659_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813J659_POLGL)

HSP 1 Score: 85.1 bits (209), Expect = 1.920e-14
Identity = 52/132 (39.39%), Postives = 79/132 (59.85%), Query Frame = 0
Query:  182 RMRSLGYVGPFLREYGSAARLLQGNVGSSLLLKTVSAPGRKKGCPSTE--GSFVPANAIDKLEASQVPLNVAQRDAVLNLTGGLDIIVGPPGTGKSTTIYYIIDARVDKNARILVTSIRNQAVDAVSAKVSG 311
            +++SLGYVG FL E+ +   L        +  + ++ P R    P  +  GS+    A   + A+ VP+N +QR A+  L   L+ I GPPGTGKSTTI++++DARV    R+LVT  RN AV++++ K+SG
Sbjct: 1540 QVKSLGYVGSFLAEFSAILEL------RGMQPRDMTGPMRAILEPKVDLPGSY----ANRPINAAAVPVNPSQRTAIEGLRHALEKIQGPPGTGKSTTIFHVLDARVPAGQRVLVTCSRNVAVESIAQKLSG 1661          
BLAST of mRNA_H-elongata_contig69770.14625.1 vs. uniprot
Match: A0A812PVU5_9DINO (SETX protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812PVU5_9DINO)

HSP 1 Score: 84.7 bits (208), Expect = 2.590e-14
Identity = 55/136 (40.44%), Postives = 78/136 (57.35%), Query Frame = 0
Query:  182 RMRSLGYVGPFLREYGSAARLLQ------GNVGSSLLLKTVSAPGRKKGCPSTEGSFVPANAIDKLEASQVPLNVAQRDAVLNLTGGLDIIVGPPGTGKSTTIYYIIDARVDKNARILVTSIRNQAVDAVSAKVSG 311
            ++RSLGY+G FL EY +A  L +       N   ++L   V  PG        + +  P NA      + VP+N +QR A+  L   L+ I GPPGTGKSTTI++I+DARV    R+LVT  RN AV++++ K+ G
Sbjct: 1770 QVRSLGYIGSFLAEYSAALELQRCKPTDVTNPMKAILEPKVDLPG--------DFARRPVNA------ALVPVNPSQRAAIEGLKYALEKIQGPPGTGKSTTIFHILDARVPAGQRVLVTCSRNVAVESIAQKLEG 1891          
BLAST of mRNA_H-elongata_contig69770.14625.1 vs. uniprot
Match: C1N8L2_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1N8L2_MICPC)

HSP 1 Score: 80.1 bits (196), Expect = 6.540e-14
Identity = 55/151 (36.42%), Postives = 81/151 (53.64%), Query Frame = 0
Query:  182 RMRSLGYVGPFLREYGSAARLLQ----GNVGSSLLLK----TVSAPGRKKGCPSTEGSFVPANAIDKLEASQVPLNVAQRDAVLNLTGGLDIIVGPPGTGKSTTIYYIIDARVDKNARILVTSIRNQAVDAVSAKVSG-FGVLVSSFHRMR 323
            ++R+ GYVG F+ E  +   L Q    G+  S +L      T   PG     P  E  F   +     +A     N +Q++AV  L+  L+ I GPPGTGKSTTIY+++  RV K  R+LVT  RN AV++++ K+ G F +  S + R+R
Sbjct:   82 QIRTFGYVGAFVAELAALNELAQREQRGHAASPVLRAVMRPTEHVPGSWGPAPLPEEDFALISGEGAPKA-----NASQKNAVCALSAALEKIQGPPGTGKSTTIYHVVTQRVPKGERVLVTCSRNVAVESIAQKLKGAFSLHWSPYDRVR 227          
BLAST of mRNA_H-elongata_contig69770.14625.1 vs. uniprot
Match: A0A7S4QCG3_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4QCG3_9DINO)

HSP 1 Score: 81.3 bits (199), Expect = 2.950e-13
Identity = 51/130 (39.23%), Postives = 76/130 (58.46%), Query Frame = 0
Query:  183 MRSLGYVGPFLREYGSAARLLQGNVGSSLLLKTVSAPGRKKGCPSTEGSFVPANAIDK-LEASQVPLNVAQRDAVLNLTGGLDIIVGPPGTGKSTTIYYIIDARVDKNARILVTSIRNQAVDAVSAKVSG 311
            +RS+GY+G +L E+ +   L +      L    V+ P R    P  +   +P +   K + AS VP+N +Q  A+  L   L+ I GPPGTGKSTTI++I+DARV    R+LVT  RN AV++++ K+ G
Sbjct:   42 VRSIGYIGSYLSEFAAILELRK------LPPNEVTRPMRAILQPKVD---IPGDFAQKPVRASLVPVNPSQGAAINGLQHALEKIQGPPGTGKSTTIFHILDARVPPGQRVLVTCSRNVAVESIAQKLEG 162          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig69770.14625.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FY65_ECTSI3.970e-7446.75AAA_12 domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5JRT8_9PHAE1.720e-3339.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2P6TVU4_CHLSO6.410e-3137.59DNA helicase n=1 Tax=Chlorella sorokiniana TaxID=3... [more]
E1ZLN5_CHLVA4.470e-2734.11Expressed protein n=1 Tax=Chlorella variabilis Tax... [more]
A0A7S0QYL2_9CHLO8.240e-1634.76Hypothetical protein (Fragment) n=1 Tax=Pyramimona... [more]
A0A813JMW8_POLGL1.900e-1439.39Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
A0A813J659_POLGL1.920e-1439.39Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
A0A812PVU5_9DINO2.590e-1440.44SETX protein n=1 Tax=Symbiodinium natans TaxID=878... [more]
C1N8L2_MICPC6.540e-1436.42Predicted protein n=1 Tax=Micromonas pusilla (stra... [more]
A0A7S4QCG3_9DINO2.950e-1339.23Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041677DNA2/NAM7 helicase, AAA domainPFAMPF13086AAA_11coord: 248..311
e-value: 1.4E-7
score: 31.5
NoneNo IPR availableGENE3D3.40.50.300coord: 209..322
e-value: 4.2E-16
score: 60.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 245..322

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig69770contigH-elongata_contig69770:1093..2770 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig69770.14625.1mRNA_H-elongata_contig69770.14625.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig69770 1093..2770 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig69770.14625.1 ID=prot_H-elongata_contig69770.14625.1|Name=mRNA_H-elongata_contig69770.14625.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=324bp
DLSASFERLSLAKSDVTIPLLTSYASLSGVSIAGPCVKVGEFVPKANPIP
DSYGSTRDYLKAMQAHTQVEFTASIKEGVASAHRKEGGGWISCTCKCGRD
CTGPTHVFDLNGTPHPNNDFGSCDDGHNFNNETWARHIVQIEGQALPALV
VTCKCTSSYHRATLWMSLPEGVTCARYKSSIRMRSLGYVGPFLREYGSAA
RLLQGNVGSSLLLKTVSAPGRKKGCPSTEGSFVPANAIDKLEASQVPLNV
AQRDAVLNLTGGLDIIVGPPGTGKSTTIYYIIDARVDKNARILVTSIRNQ
AVDAVSAKVSGFGVLVSSFHRMR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041677DNA2/NAM7_AAA_11
IPR027417P-loop_NTPase