mRNA_H-elongata_contig69448.14595.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig69448.14595.1 vs. uniprot
Match: D7FX88_ECTSI (PLCXc domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX88_ECTSI) HSP 1 Score: 388 bits (996), Expect = 8.020e-131 Identity = 194/339 (57.23%), Postives = 245/339 (72.27%), Query Frame = 1
Query: 1 SLPTWNGGGG--GDRLVVRRQAGCGTTGGCATTDTCNDEVYARGCDTPVHYVCKHQLPGLNVCESPPLATMLPCWMSSLSDGLSLSEISIPGTHDTMAKGSSACLQGGITNQFYTQAGGAWSLRTMLDAGVRALDIRLRHVND-SFTLEHDIMELPYAFDEDVRDVLETFLSENPTEAVLMFYQINDLGPNTR----TPEESLQESLEAYPDLWIAGSVIPSLGEARGRVVLANDMPRKEQNDYDLGTLGGVSYKKDLIREFFLEGAGAPA-GDTFRLNYFSGTGIFLYPLTVAAGLGTLCQGTNEVLFEFTDGFLGIAIFDFIGEDAITHIATQQARD 993
++P +N G GD + GCG TGGCAT DTC + C P YVC+HQLPGL+VCESPP+A+M PCWMS L L L++IS+PGTHDTM+KG SACLQ G N +TQA WSLRTMLD GVRA+D+R+R +D S LEH I+ELPY FD DVRDVL +FL++NPTE V+MFYQ+NDL T E++LQ S+ YPDLW+ G+V+P+L EARG+ VL DM ++EQND++L + V+ KK L+R+FFLEG G PA G FRLNY SGTG ++YPLTVAAGL ++ QGTNEV+FEF+ G LG+ +FDF+GEDA+ H+ QQ D
Sbjct: 39 NMPHYNNAGAQSGDAHRAAQDLGCGVTGGCATLDTCGSDSSDADCAAPDSYVCEHQLPGLSVCESPPVASMQPCWMSGLDGALRLNQISLPGTHDTMSKGISACLQEGQANYVHTQA---WSLRTMLDTGVRAIDVRIRRKSDLSLVLEHGIVELPYGFDVDVRDVLASFLTDNPTETVVMFYQMNDLAGEDSSGGVTAEDTLQASMSQYPDLWLDGAVVPTLEEARGKAVLPTDMGQEEQNDFNLSSFEAVATKKGLVRDFFLEGGGVPADGGPFRLNYLSGTGTYVYPLTVAAGLKSVYQGTNEVVFEFSGGSLGVVMFDFVGEDAVAHVVAQQGTD 374
BLAST of mRNA_H-elongata_contig69448.14595.1 vs. uniprot
Match: UPI001F2D45DE (phosphatidylinositol-specific phospholipase C domain-containing protein n=1 Tax=Myxococcus stipitatus TaxID=83455 RepID=UPI001F2D45DE) HSP 1 Score: 128 bits (322), Expect = 1.880e-29 Identity = 101/285 (35.44%), Postives = 145/285 (50.88%), Query Frame = 1
Query: 196 LATMLPCWMSSLSDGLSLSEISIPGTHDTMAKGSSACLQGGITNQFYTQAGGAWSLRTMLDAGVRALDIRLRHVNDSFTLEHDIMELPYAFDEDVRDVLETFLSENPTEAVLMFYQINDLGPN-TRTPEESLQESLEAYPD-------LWIAGSVIPSLGEARGRVVLANDMPRKE----------QNDYDLGTLGGVSYKKDLIREFFLE-GAGAPAGDTFRLNYFSGTGIFLYPLTVAAG---LGTLCQGTNEVLFEFTDGF----LGIAIFDFIGEDAITHI 972
+ T P WMS + G SL+ +S+PGTHDTMA S GG Q TQ+ LR+ LDAG+RALDIR RH++++FT+ H ++ L FD+ +R ++ FL+ NPTE V+M + N TRT ++ EAY D LW GS +P+LGE RG++V+ +D Q+D+ + L + K +R+ GAP T +N+ SG+ YPL VA G LG +G N+ + G G+ + DF G I I
Sbjct: 27 IETSHPTWMSWVPGGTSLAALSLPGTHDTMAYQS----YGGDLTQ--TQS---LDLRSQLDAGIRALDIRCRHIDNAFTIHHGVVYLHVNFDDVLRTTIQ-FLNANPTETVVMRVKKEHTEENVTRT----FAQTFEAYRDQPAYSPYLW-RGSHVPTLGEVRGKIVILDDFAGGAYGIPWGAISLQDDWTVSQLADIDDKWFKVRDHLARTNTGAPG--TLFVNFLSGSSALAYPLHVAGGINILGVQTRGVNDYAIDHLVGGNVQRAGVMMMDFPGAGLIDAI 294
BLAST of mRNA_H-elongata_contig69448.14595.1 vs. uniprot
Match: A0A511T7G9_MYXFU (1-phosphatidylinositol phosphodiesterase n=4 Tax=Myxococcus TaxID=32 RepID=A0A511T7G9_MYXFU) HSP 1 Score: 125 bits (315), Expect = 1.800e-28 Identity = 102/296 (34.46%), Postives = 143/296 (48.31%), Query Frame = 1
Query: 184 ESPPLATMLPCWMSSLSDGLSLSEISIPGTHDTMAKGSSACLQGGITNQFYTQAGGAWSLRTMLDAGVRALDIRLRHVNDSFTLEHDIMELPYAFDEDVRDVLETFLSENPTEAVLMFYQINDLGPNTRTPEE---SLQESLEAYPD-------LWIAGSVIPSLGEARGRVVLANDMPRKE----------QNDYDLGTLGGVSYKKDLIREFFLEGAGAPAGDTFRLNYFSGTGIFLYPLTVAAGLGTL---CQGTNEVLFEFTDGFL----GIAIFDFIGEDAITHIATQQAR 990
+S + T P WMS +S+ SL+ +SIPGTHDTMA S GG Q TQ+ LR LDAGVRALDIR RH+ D FT+ H ++ L FD+ +R ++ FL++NPTE V+M + T E+ S ++ E Y D LW GS +P+LGE RGR+V+ +D Q+D+ + L + K + +R G F +N+ SG +PL VA G+ L +G N+ + G GI + DF G I I R
Sbjct: 33 DSGSIETTHPSWMSWVSNSTSLASLSIPGTHDTMAYQS----YGGSLTQ--TQS---LDLRKQLDAGVRALDIRCRHIGDRFTIHHGVVYLHVNFDDVLRTTIQ-FLNDNPTETVVMRVK------REHTEEDITRSFSQTFEWYRDQPAYSPYLW-RGSHVPTLGEVRGRIVVLDDFAGGAYGIPWGALDLQDDWTVSQLADIDDKWNKVRAHLDRTQGGAPSKLF-VNFLSGASAMAHPLHVAGGINVLGIGYRGVNDFAIDHLVGGYAQRAGILMMDFPGAGLIDAILALNVR 310
BLAST of mRNA_H-elongata_contig69448.14595.1 vs. uniprot
Match: UPI001F209607 (phosphatidylinositol-specific phospholipase C n=1 Tax=Marinitenerispora sediminis TaxID=1931232 RepID=UPI001F209607) HSP 1 Score: 119 bits (298), Expect = 1.480e-27 Identity = 98/289 (33.91%), Postives = 136/289 (47.06%), Query Frame = 1
Query: 211 PCWMSSLSDGLSLSEISIPGTHDTMAKGSSACLQGGITNQFYTQAGGAWSLRTMLDAGVRALDIRLRHVNDSFTLEHDIMELPYAFDEDVRDVLETFLSENPTEAVLMFYQINDLGP-NTRTPEESLQESLEAYPD--------LWIA-----GSVIPSLGEARGRVVLANDM--------PR------KEQNDYDLGTLGGVSYKKDLIREFFLEGAGAPAGDTFRLNYFSGTGIFLYPLTVAAGLGTLCQGTNEVLFEFTDGF----LGIAIFDFIGEDAITHIATQ 981
P WM+ +SDG SL+ +SIPGTHDTMA+ +A + TQ L LDAGVRALDIR RH D FT+ H + L F + +R + FL E+PTE VLM + NTRT EE+L L PD +W + IP LG+ RGR+V+ D PR Q+DY++ TL ++ K + R F PA D +N+ SG + P+ VA+G G +G N+ G+ + D+ G + I +
Sbjct: 30 PDWMAEISDGTSLAALSIPGTHDTMARDVTALAE--------TQES---PLPEQLDAGVRALDIRTRHFQDRFTIHHGRVYLHANFTDVLRQTTD-FLREHPTETVLMRVKPEHTAEQNTRTYEETLDWYLTENPDTAGLAHDYVWTPPGGEYATRIPDLGQVRGRIVILQDFDGAGTVYGPRWAGAGMSIQDDYEVPTLFDIARKWEKARTHFETTRTGPA-DRLHINFLSGASLGALPIHVASG-GLGFRGVNDYALSHLRATDLPRTGVVMADYPGPGLVEEILAE 304
BLAST of mRNA_H-elongata_contig69448.14595.1 vs. uniprot
Match: UPI0009E30A81 (phosphatidylinositol-specific phospholipase C n=1 Tax=Allosalinactinospora lopnorensis TaxID=1352348 RepID=UPI0009E30A81) HSP 1 Score: 122 bits (306), Expect = 1.970e-27 Identity = 105/303 (34.65%), Postives = 145/303 (47.85%), Query Frame = 1
Query: 202 TMLPCWMSSLSDGLSLSEISIPGTHDTMAKGSSACLQGGITNQFYTQAGGAWSLRTMLDAGVRALDIRLRHVNDSFTLEHDIMELPYAFDEDVRDVLETFLSENPTEAVLM-FYQINDLGPNTRTPEESLQESLEAYPD--------LWIAGSV---IPSLGEARGRVVLANDM--------PR------KEQNDYDLGTLGGVSYKKDLIREFFLEGAGAPAGDTFRLNYFSGTGIFLYPLTVAAGLGTLCQGTNEV----LFEFTDGFLGIAIFDFIGEDAITHIATQQARDAHSDSPLSA 1020
T P WMS + D L+ +SIPGTHDTMA+G +T TQ G L L AG+RALDIR RH D F + H + L F + +RD + FL E+PTE VLM + NTR+ E+L+ L PD LW G IP+LGEARG++VL D PR Q++Y + T+ + K R F E G+ + +N+ SG G+ YP VA G+ L +G N+ LFE G+ + D+ G + + R A +D+ +SA
Sbjct: 58 TSHPDWMSLVPDDTDLAALSIPGTHDTMARG--------VTPAANTQDSG---LPEQLGAGIRALDIRARHHRDVFPIHHGRVYLNANFTDVLRDTTD-FLKEHPTETVLMRLKEEYRAEENTRSFAETLEWYLNDNPDTADLAREHLWSPGGDGRRIPTLGEARGKIVLLQDFNGDGAVYGPRWGGPAMDIQDEYRVPTIFDIDDKWHKARAHF-EKTGSGDSEALSVNFLSGAGVGAYPKEVARGVLGL-RGVNDFALQYLFERNVSRTGVVMMDYPGAGLVDAVVAHNFRLAGADTDVSA 346
BLAST of mRNA_H-elongata_contig69448.14595.1 vs. uniprot
Match: UPI0013DD2904 (phosphatidylinositol-specific phospholipase C domain-containing protein n=1 Tax=Pyxidicoccus trucidator TaxID=2709662 RepID=UPI0013DD2904) HSP 1 Score: 122 bits (306), Expect = 3.050e-27 Identity = 94/277 (33.94%), Postives = 142/277 (51.26%), Query Frame = 1
Query: 196 LATMLPCWMSSLSDGLSLSEISIPGTHDTMAKGSSACLQGGITNQFYTQAGGAWSLRTMLDAGVRALDIRLRHVNDSFTLEHDIMELPYAFDEDVRDVLETFLSENPTEAVLMFYQINDLGPN-TRTPEESLQ---ESLEAYPDLWIAGSVIPSLGEARGRVVLAND-------MPRKE---QNDYDLGTLGGVSYKKDLIREFFLEGAGAPAGDTFRLNYFSGTGIFLYPLTVAAGLGTLCQGTNEVLFEFTDGF----LGIAIFDFIGEDAITHI 972
+ T P WM + D SL+ +S+PGTHDTMA ++ GG Q TQ+ +LR LDAG+RALDIR RH+ D+FT+ H ++ L F DV + FLSE+P E ++M + N TRT ++ + E P +W GS +P+LGE RG++V+ +D +P Q+D+ + TL + K + +R LE + +N+ SG+ +P VA G G+ +G N+ ++ G GI + DF G I I
Sbjct: 42 IETSHPGWMGAFPDSTSLASVSLPGTHDTMAFTNT----GGDLTQ--TQS---LNLRAQLDAGIRALDIRCRHIGDAFTIHHGVVYLNVNFT-DVLNTATQFLSEHPRETLVMRVKKEHTEENITRTFAQTFEWYREQPAFKPYIW-RGSHVPTLGEVRGKLVILDDFGGGAYGIPWSSLDLQDDWTVSTLFDIDDKWNKVRAH-LEKTNTGSPSKLFVNFLSGSSAGAFPYMVAGGAGSGIRGVNDFAIDYLVGAKVQRAGIMMMDFPGAGLIDAI 306
BLAST of mRNA_H-elongata_contig69448.14595.1 vs. uniprot
Match: A0A0H4WXD2_9DELT (1-phosphatidylinositol phosphodiesterase n=1 Tax=Myxococcus hansupus TaxID=1297742 RepID=A0A0H4WXD2_9DELT) HSP 1 Score: 119 bits (297), Expect = 4.950e-26 Identity = 95/285 (33.33%), Postives = 139/285 (48.77%), Query Frame = 1
Query: 184 ESPPLATMLPCWMSSLSDGLSLSEISIPGTHDTMAKGSSACLQGGITNQFYTQAGGAWSLRTMLDAGVRALDIRLRHVNDSFTLEHDIMELPYAFDEDVRDVLETFLSENPTEAVLMFYQINDLGPNTRTPEESLQESLEAY-------PDLWIAGSVIPSLGEARGRVVLANDM----------PRKEQNDYDLGTLGGVSYKKDLIREFFLEGAGAPAGDTFRLNYFSGTGIFLYPLTVAAGLGTL-CQGTNEVLFEFT----DGFLGIAIFDFIGEDAITHI 972
+S + T P WM+ + D LS +S+PGTHDTMA GG Q TQ+ LR L+AGVRALDIR RH+ DSFT+ H ++ L FD+ +R ++ FL+ NP+E V+M + N S E+ AY P +W GS +PSLGE RG++V+ +D Q+D+ + TL + K + +R LE A + +N+ SG +P +VA G ++ +G N+ + + GI DF G I I
Sbjct: 38 DSGSIETHHPNWMNWVPDSTRLSALSLPGTHDTMAYQG----YGGSLTQ--TQS---LDLRKQLEAGVRALDIRCRHIADSFTIHHGVVYLHVNFDDVLRTTIQ-FLNANPSETVVMRVKKEHTEENVT---RSFAETYLAYRNNPAYRPYIW-TGSQVPSLGEVRGKIVILDDFGGGAYGIAWGSLNLQDDWTVSTLFDIGNKWNKVRAH-LERTNTGASSSLFVNFLSGASALAHPYSVAGGHSSMGIRGVNDYAIDHLVAGHNQRAGILFMDFPGAGLIDAI 307
BLAST of mRNA_H-elongata_contig69448.14595.1 vs. uniprot
Match: A0A848LVM1_9DELT (1-phosphatidylinositol phosphodiesterase n=4 Tax=Pyxidicoccus TaxID=224458 RepID=A0A848LVM1_9DELT) HSP 1 Score: 118 bits (296), Expect = 6.180e-26 Identity = 91/286 (31.82%), Postives = 145/286 (50.70%), Query Frame = 1
Query: 196 LATMLPCWMSSLSDGLSLSEISIPGTHDTMAKGSSACLQGGITNQFYTQAGG------AWSLRTMLDAGVRALDIRLRHVNDSFTLEHDIMELPYAFDEDVRDVLET---FLSENPTEAVLMFYQINDLGPN-TRTPEESLQ--ESLEAY-PDLWIAGSVIPSLGEARGRVVLAND-------MPRKE---QNDYDLGTLGGVSYKKDLIREFFLEGAGAPAGDTFRLNYFSGTGIFLYPLTVAAGLGTLCQGTNEVLFEFTDGF----LGIAIFDFIGEDAITHI 972
+ T P WM++ D L+ +S+PGTHDTMA +T AGG + +LR LDAG+RALDIR RH+ND+FT+ H ++ L F DVL T FL+ NP E ++M + N TRT ++ + + A+ P +W G+ +P+LGE RG++V+ +D +P Q+D+ + ++ + K + +R L+ + T +N+ SG+ + +P VA G+G +G N+ ++ G GI + DF G I I
Sbjct: 27 IETSHPNWMAAFPDSTGLASMSLPGTHDTMA---------------FTNAGGDLTQTQSLNLRAQLDAGIRALDIRCRHINDAFTIHHGVVYLNVNF----TDVLTTAIQFLNANPRETLVMRVKKEHTEENITRTFAQTFEWYRNQPAFSPYIW-RGNFVPTLGEVRGKIVILDDFAGGAYGIPWSSLDLQDDWTVPSIFDIDDKWNKVRAH-LDRTNTGSPSTLYVNFLSGSSVGAFPYVVAGGVGAT-RGVNDFAIDYLVGAHVQRAGILMMDFPGAGLIDAI 290
BLAST of mRNA_H-elongata_contig69448.14595.1 vs. uniprot
Match: A0A368T564_9ACTN (1-phosphatidylinositol phosphodiesterase n=2 Tax=Marinitenerispora sediminis TaxID=1931232 RepID=A0A368T564_9ACTN) HSP 1 Score: 114 bits (284), Expect = 7.760e-26 Identity = 96/286 (33.57%), Postives = 134/286 (46.85%), Query Frame = 1
Query: 220 MSSLSDGLSLSEISIPGTHDTMAKGSSACLQGGITNQFYTQAGGAWSLRTMLDAGVRALDIRLRHVNDSFTLEHDIMELPYAFDEDVRDVLETFLSENPTEAVLMFYQINDLGP-NTRTPEESLQESLEAYPD--------LWIA-----GSVIPSLGEARGRVVLANDM--------PR------KEQNDYDLGTLGGVSYKKDLIREFFLEGAGAPAGDTFRLNYFSGTGIFLYPLTVAAGLGTLCQGTNEVLFEFTDGF----LGIAIFDFIGEDAITHIATQ 981
M+ +SDG SL+ +SIPGTHDTMA+ +A + TQ L LDAGVRALDIR RH D FT+ H + L F + +R + FL E+PTE VLM + NTRT EE+L L PD +W + IP LG+ RGR+V+ D PR Q+DY++ TL ++ K + R F PA D +N+ SG + P+ VA+G G +G N+ G+ + D+ G + I +
Sbjct: 1 MAEISDGTSLAALSIPGTHDTMARDVTALAE--------TQES---PLPEQLDAGVRALDIRTRHFQDRFTIHHGRVYLHANFTDVLRQTTD-FLREHPTETVLMRVKPEHTAEQNTRTYEETLDWYLTENPDTAGLAHDYVWTPPGGEYATRIPDLGQVRGRIVILQDFDGAGTVYGPRWAGAGMSIQDDYEVPTLFDIARKWEKARTHFETTRTGPA-DRLHINFLSGASLGALPIHVASG-GLGFRGVNDYALSHLRATDLPRTGVVMADYPGPGLVEEILAE 272
BLAST of mRNA_H-elongata_contig69448.14595.1 vs. uniprot
Match: A0A2E0AQ73_9BACT (1-phosphatidylinositol phosphodiesterase n=2 Tax=Planctomycetia TaxID=203683 RepID=A0A2E0AQ73_9BACT) HSP 1 Score: 114 bits (286), Expect = 8.150e-26 Identity = 91/270 (33.70%), Postives = 126/270 (46.67%), Query Frame = 1
Query: 217 WMSSLSDGLSLSEISIPGTHDTMAKGSSACLQGGITNQFYTQAGGAWSLRTMLDAGVRALDIRLRHVNDSFTLEHDIMELPYAFDEDVRDVLETFLSENPTEAVLMFYQINDLGP-NTRTPEESLQESLEAYPDLWIAGSVIPSLGEARGRVVLANDMPRKEQNDYDLGTLGGVSY---------------KKDLIREFFLEGAGAPAGDTFRLNYFSGT--GIFLYPLTVAAGLGTLCQGTNEVLFEFTDGFLGIAIFDFIGEDAITHI 972
WM+ L DG LS++S+PGTHDT A L G + F +W+L L+AG+R LDIR RH+ D F + H I++ FDE VRDV FL ++PTE ++M + NTR+ E+ + LW + +P L E RGRVVL + + GTLGG+ + K LIR F + + F +NY SGT G L P AA + + L LG + DF GE+ I +
Sbjct: 49 WMARLPDGHLLSQLSLPGTHDTCA------LHDGFSFGFAKCQ--SWALGDQLNAGIRFLDIRCRHLGDRFAIYHGIIDQRMGFDE-VRDVCRDFLKQHPTECIVMSVKEESSAKGNTRSFAETFAAITQDDGKLWHISTKMPKLQEVRGRVVLLDRV----------GTLGGLKWSATQLQDQYSTPVENKSKLIRAHFKKASDGQKDQWF-INYCSGTLPGRLLTPRQYAAKTNAVALDYVKQLKRKERVRLGTVVMDFPGEELIEQV 298 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig69448.14595.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig69448.14595.1 >prot_H-elongata_contig69448.14595.1 ID=prot_H-elongata_contig69448.14595.1|Name=mRNA_H-elongata_contig69448.14595.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=344bp SLPTWNGGGGGDRLVVRRQAGCGTTGGCATTDTCNDEVYARGCDTPVHYVback to top mRNA from alignment at H-elongata_contig69448:253..1675- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig69448.14595.1 ID=mRNA_H-elongata_contig69448.14595.1|Name=mRNA_H-elongata_contig69448.14595.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1423bp|location=Sequence derived from alignment at H-elongata_contig69448:253..1675- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig69448:253..1675- >mRNA_H-elongata_contig69448.14595.1 ID=mRNA_H-elongata_contig69448.14595.1|Name=mRNA_H-elongata_contig69448.14595.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2064bp|location=Sequence derived from alignment at H-elongata_contig69448:253..1675- (Himanthalia elongata Himel1 dioecious)back to top |