mRNA_H-elongata_contig6918.14568.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig6918.14568.1
Unique NamemRNA_H-elongata_contig6918.14568.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig6918.14568.1 vs. uniprot
Match: D8LTI6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTI6_ECTSI)

HSP 1 Score: 278 bits (711), Expect = 2.410e-81
Identity = 223/574 (38.85%), Postives = 265/574 (46.17%), Query Frame = 1 
Query:    1 VIPTAEELTARTISEAGDDQAATKGLIPRVQQRLIDEHRGKIGEGIGDGRVPRA-------------------GRGREDLA----WRKNGARET--AEWRFCDPRTTHCTQRGFQGSKFSCGYRNIQMMCSALIEWPEYRSRVLFGGSGFIPGVFLLQCWIERAWANGFDPEGCEQLGGPGALMGSEKWIGATECAALLRQ-AEHTDVIDFESSA------AAQLKTSRRLDTKVERANADSYAVCAPGSRHEQPDP---------------PGTAVRRDLVRSSPANPTQQQQSIRSYFPPRDAQGGRGRPGSGDCSIVSRPVGGLFVSPSAGARPGCYRGLERRGPPPGHSDSNNSV-QGRGVDGKTCLWRRSSRQTLGGGRWR--------------------GKRKDGQGGRGDADIIREAGWRMGGAIVEWAWEYFCTPWDDVGTVADDSRGCPTQPRGGSCGAESYAKTGRPRPREVRMSGLAKEPAWGMTETPARKCTVEGGGSTGGDC-----------EVFASGGGGTPKQSENARATLTRPPPPLYFQHDGHSRSIVGVLWPGG 1485
            ++PT  EL ART++  GD  + T GLIPR+ +RL+ EH  + G G G G                        GRG  D++    +   GAR    AEWR CD RT HCTQRG  GS FSCGYRNIQM+CSAL+EWPEY+ RVLFGGSG IPGV LLQCWIERAWA+G+DP+GC QLGG GALMGSE WIGATECA LLR      +VIDFESSA      A +  +++       +    S A  +P S H                    P +   R +  S    P QQ  SIR + P   +     R  S   S      GG  +    G   G     ERR P  G    N    +GRGV G+          + GGGR                        RK+G        I ++AG RMG A+  WAWEYFCTPW   GT    S         G  GAE      RP P ++R                      E GGS GG+                         ++      TRPPPPLYFQHDGHSRSIVGVL PGG
Sbjct:   25 LVPTRAELKARTVAAGGDRLSTTPGLIPRIHERLLGEHNAR-GSGRGGGVRGNTTTGGGSLGVRERQTFMRGWGRGGFDMSVTSDFAGGGARAATAAEWRLCDQRTKHCTQRGSHGSGFSCGYRNIQMLCSALMEWPEYK-RVLFGGSGCIPGVALLQCWIERAWADGYDPDGCAQLGGLGALMGSETWIGATECATLLRSFGVKAEVIDFESSAPLAPAFAGEASSAQEEPEGGSKRKTPSSAPRSPLSLHPNGSTSSRAWPSGPSSLDAYPSSNGGRGVQASVAQGPVQQ--SIRPFLPSSSSPSSTPRDRSAVTSWTQ--PGGAII----GIGGGLGGQHERRWPGAGQRLGNGGRGRGRGVAGRDGFL------SDGGGRXXXXXXXXXXXXXXXXXXXXXXAHRKNGY-------IGKDAGDRMGKALAAWAWEYFCTPW---GTAEGSSSSIGD----GDKGAELLLPPSRP-PSQLR----------------------EPGGSGGGNACSGRXXXXXXXXXXXXXXXXXXTATDRRAEAWTRPPPPLYFQHDGHSRSIVGVLQPGG 545
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BLAST of mRNA_H-elongata_contig6918.14568.1 vs. uniprot
Match: A0A6H5JIH7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIH7_9PHAE)

HSP 1 Score: 121 bits (303), Expect = 2.950e-28
Identity = 65/138 (47.10%), Postives = 79/138 (57.25%), Query Frame = 1 
Query:    1 VIPTAEELTARTISEAGDDQAATKGLIPRVQQRLIDEHRGKIGEGIGDGRVPRAGRG-----REDLAWRKNGAR------------------ETAEWRFCDPRTTHCTQRGFQGSKFSCGYRNIQMMCSALIEWPEYR 345
            ++PT  EL ART++  GD Q+ T GLIPR+ +RL+ EH  +     G GR  RA  G     RE   + + G R                    AEWR CD RT HCTQRG  GS FSCGYRNIQM+CSAL+EWPEY+
Sbjct:   25 LVPTRAELEARTVAAGGDHQSTTPGLIPRIHERLLGEHNARGSGRGGGGRGNRAADGGPTGVRERQTFMRGGERGGCDSSVTSDFAGXXXXXXXAEWRLCDQRTKHCTQRGSHGSGFSCGYRNIQMLCSALMEWPEYK 162
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BLAST of mRNA_H-elongata_contig6918.14568.1 vs. uniprot
Match: A0A7S1C6F5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C6F5_9STRA)

HSP 1 Score: 117 bits (293), Expect = 3.690e-24
Identity = 63/116 (54.31%), Postives = 77/116 (66.38%), Query Frame = 1 
Query:  226 FCDPRTTHCTQRGFQGSKFSCGYRNIQMMCSALIEWPEYRSRVLFGGSGFIPGVFLLQCWIERAWANGFDPEGCEQLGGPGALMGSEKWIGATECAALLRQ-AEHTDVIDFESSAA 570
             C P TT  +QRG +G+ F+CGYRNIQM+CSAL+  P +R   LFGG   IP V  LQ WIERAW+ GFDP G  QLG   +L+G+ KWIG  ECAALLR      +++DF  S A
Sbjct:  259 LCGP-TTFFSQRGVEGAGFACGYRNIQMLCSALVRHPPFRD-ALFGGLDTIPDVPSLQGWIERAWSLGFDPLGAAQLGH--SLVGTSKWIGTMECAALLRSFGIPAEIVDFAPSRA 370
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BLAST of mRNA_H-elongata_contig6918.14568.1 vs. uniprot
Match: A0A7S4DCM4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DCM4_HETAK)

HSP 1 Score: 102 bits (253), Expect = 1.270e-21
Identity = 60/130 (46.15%), Postives = 72/130 (55.38%), Query Frame = 1 
Query:  268 QGSKFSCGYRNIQMMCSALIEWPEYRSRVLF-------GGSGFIPGVFLLQCWIERAWANGFDPEGCEQLGGPGALMGSEKWIGATECAALLRQ-AEHTDVIDFESSAAAQLKTSRRLDTKVERANADSY 633
            +G ++SCGYRNIQM+C AL+  PEYR RVLF       G +   PGV  LQ W+ERAWA GFDP G     G G + G E WIGATE  ALLR       V+DF+ S    L  S   D    + +   Y
Sbjct:    8 EGLQWSCGYRNIQMLCDALLRRPEYR-RVLFEGAYARPGAAARAPGVRALQGWLERAWALGFDPAGAALFPG-GRVAGGEAWIGATEAVALLRSFGVRAQVVDFDESFTTMLHKSGVRDAAARQRSILEY 135
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BLAST of mRNA_H-elongata_contig6918.14568.1 vs. uniprot
Match: A0A4P1QX86_LUPAN (Uncharacterized protein n=1 Tax=Lupinus angustifolius TaxID=3871 RepID=A0A4P1QX86_LUPAN)

HSP 1 Score: 102 bits (253), Expect = 1.140e-19
Identity = 53/105 (50.48%), Postives = 67/105 (63.81%), Query Frame = 1 
Query:  247 HCTQRGFQGSKFSCGYRNIQMMCS-ALIEWPEYRSRVLFGGSGFIPGVFLLQCWIERAWANGFDPEGCEQLGGPGALMGSEKWIGATECAALLRQ-AEHTDVIDF 555
            H     F+ + + CG+RNIQM+CS  L++ PE R   LFGGSGF+P +  LQ W+E AW  GFDP+G  Q     A+ GS+KWIG TECA LLR  A    V+DF
Sbjct:  132 HFQSLEFEDAGWGCGWRNIQMLCSHLLVQRPEARE-ALFGGSGFVPDIPSLQRWLEIAWEKGFDPDGSAQF--DNAIYGSQKWIGTTECATLLRSFALRARVVDF 233
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BLAST of mRNA_H-elongata_contig6918.14568.1 vs. uniprot
Match: A0A388LBY1_CHABU (ZZ-type domain-containing protein n=2 Tax=Chara braunii TaxID=69332 RepID=A0A388LBY1_CHABU)

HSP 1 Score: 102 bits (255), Expect = 3.400e-19
Identity = 51/93 (54.84%), Postives = 62/93 (66.67%), Query Frame = 1 
Query:  280 FSCGYRNIQMMCSALIEWPEYRSRVLFGGSGFIPGVFLLQCWIERAWANGFDPEGCEQLGGPGALMGSEKWIGATECAALLRQ-AEHTDVIDF 555
            + CG+RNIQM+CS LI   E   RVLFGG GF+P +  LQ W+ERAW +GFD  G EQLG    + G+ KWIG TECAALLR       ++DF
Sbjct:  256 WGCGWRNIQMLCSHLIRMREDAKRVLFGGVGFVPSIKDLQQWLERAWRSGFDMMGAEQLGWK--VHGTNKWIGTTECAALLRSFGLRARIVDF 346
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BLAST of mRNA_H-elongata_contig6918.14568.1 vs. uniprot
Match: D8U399_VOLCA (Uncharacterized protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8U399_VOLCA)

HSP 1 Score: 101 bits (251), Expect = 3.730e-19
Identity = 48/101 (47.52%), Postives = 67/101 (66.34%), Query Frame = 1 
Query:  280 FSCGYRNIQMMCSALIEWPEYRSRVLFGGSGFIPGVFLLQCWIERAWANGFDPEGCEQLGGPGALMGSEKWIGATECAALLRQ-AEHTDVIDFESSAAAQL 579
            + CG+RNIQM+ SAL+   +   R ++GG+GF+P +  LQ W+E AWA GFD  GCE LGG   + G  KWIG TE AA+LR       ++DFE+S+ A++
Sbjct:  131 WGCGWRNIQMISSALMLRDDRLRRAMYGGAGFVPDIASLQAWLESAWAAGFDMLGCESLGGK--IQGDRKWIGTTEAAAVLRSFGVRAQIVDFEASSRAEV 229
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BLAST of mRNA_H-elongata_contig6918.14568.1 vs. uniprot
Match: A0A388KGA4_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KGA4_CHABU)

HSP 1 Score: 102 bits (253), Expect = 1.120e-18
Identity = 49/82 (59.76%), Postives = 59/82 (71.95%), Query Frame = 1 
Query:  280 FSCGYRNIQMMCSALIEWPEYRSRVLFGGSGFIPGVFLLQCWIERAWANGFDPEGCEQLGGPGALMGSEKWIGATECAALLR 525
            + CG+RNIQM+CS LI+  E   R LFGGSGF+P +  LQ W+E AW +GFD  G EQLG    + GS+KWIG TECAALLR
Sbjct:  213 WGCGWRNIQMLCSNLIKTREDAKRTLFGGSGFVPSIKDLQQWLEVAWRSGFDVVGAEQLGWK--VYGSKKWIGTTECAALLR 292
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BLAST of mRNA_H-elongata_contig6918.14568.1 vs. uniprot
Match: A0A835YSB8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSB8_9STRA)

HSP 1 Score: 100 bits (248), Expect = 2.490e-18
Identity = 78/231 (33.77%), Postives = 97/231 (41.99%), Query Frame = 1 
Query:   22 LTARTISEAGDDQAATKGLIPRVQQRLIDEHRGKIGEGIGDGRVPRAGRGREDLAWRKNGARETAEWRFCDPRTTHCTQRGFQGSK-FSCGYRNIQMMCSALIEWPEYRSRVLFGGSGFI-----------------------------------PGVFLLQCWIERAWANGFDPEGCEQLGGP----------------GALMGSEKWIGATECAALLRQ-AEHTDVIDF 555
            L   T  E GD +A T  ++  ++ RL+                  A R +E  A+          +  C+  T H TQ    GS+ F+CGYRNIQMMC+ L+  P YR RVLFGG+G +                                   PGV LLQ W ERAW  GFD  G EQ                    G L G+ KWIGATECAALLR      +V+DF
Sbjct:  238 LVEHTAREGGDAKARTNDVMRLLRDRLL------------------AARRQEGPAY---------AFALCELSTAHYTQCSDAGSRWFACGYRNIQMMCATLMTIPAYR-RVLFGGTGVVSGAALLQVCTPQQKHLKFDSVIRALPSPLASPQVVPGVALLQAWTERAWEAGFDTAGQEQSIAACVSMTVWRMCAARVQVGPLQGTSKWIGATECAALLRYFGVRAEVVDF 440
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BLAST of mRNA_H-elongata_contig6918.14568.1 vs. uniprot
Match: A0A2K3MZZ7_TRIPR (Zinc finger with UFM1-specific peptidase domain protein n=4 Tax=Trifolium TaxID=3898 RepID=A0A2K3MZZ7_TRIPR)

HSP 1 Score: 98.2 bits (243), Expect = 2.500e-18
Identity = 53/117 (45.30%), Postives = 68/117 (58.12%), Query Frame = 1 
Query:  280 FSCGYRNIQMMCSALIEWPEYRSRVLFGGSGFIPGVFLLQCWIERAWANGFDPEGCEQLGGPGALMGSEKWIGATECAALLRQ-AEHTDVIDFESSAAAQLKTSRRLDTKVERANAD 627
            + CG+RNIQM+ S L+   +    VLFGGSGF+P +  LQ W+E AW  GFD  G  QL     + GS+KWIG TECAALLR  A    V+DF     +Q      +D  V++A  D
Sbjct:  145 WGCGWRNIQMLSSHLLAQRQEAREVLFGGSGFVPDIPSLQRWLEIAWEKGFDAPGASQL--DHVVYGSKKWIGTTECAALLRSFALRARVVDFGPKEESQSVVGTSVDKAVDKARND 259
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6918.14568.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTI6_ECTSI2.410e-8138.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JIH7_9PHAE2.950e-2847.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S1C6F5_9STRA3.690e-2454.31Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7S4DCM4_HETAK1.270e-2146.15Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A4P1QX86_LUPAN1.140e-1950.48Uncharacterized protein n=1 Tax=Lupinus angustifol... [more]
A0A388LBY1_CHABU3.400e-1954.84ZZ-type domain-containing protein n=2 Tax=Chara br... [more]
D8U399_VOLCA3.730e-1947.52Uncharacterized protein n=1 Tax=Volvox carteri f. ... [more]
A0A388KGA4_CHABU1.120e-1859.76Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
A0A835YSB8_9STRA2.490e-1833.77Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A2K3MZZ7_TRIPR2.500e-1845.30Zinc finger with UFM1-specific peptidase domain pr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig6918contigH-elongata_contig6918:7298..10120 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score202.6
Seed ortholog evalue3.6e-49
Seed eggNOG ortholog2880.D8LTI6
Preferred nameZUFSP
GOsGO:0003674,GO:0003824,GO:0006464,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016579,GO:0016787,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0070646,GO:0070647,GO:0071108,GO:0071704,GO:0101005,GO:0140096,GO:1901564,GO:1990380
EggNOG free text desc.ubiquitinyl hydrolase activity
EggNOG OGsKOG4696@1,KOG4696@2759
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons5
Model size1804
Cds size1245
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931089.290839-UTR-H-elongata_contig6918:7297..76031622931089.290839-UTR-H-elongata_contig6918:7297..7603Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6918 7298..7603 +
1691679693.4527462-UTR-H-elongata_contig6918:7297..76031691679693.4527462-UTR-H-elongata_contig6918:7297..7603Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6918 7298..7603 +
1622931089.3858194-UTR-H-elongata_contig6918:9534..96571622931089.3858194-UTR-H-elongata_contig6918:9534..9657Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6918 9535..9657 +
1691679693.4943738-UTR-H-elongata_contig6918:9534..96571691679693.4943738-UTR-H-elongata_contig6918:9534..9657Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6918 9535..9657 +
1622931089.4035408-UTR-H-elongata_contig6918:9990..101201622931089.4035408-UTR-H-elongata_contig6918:9990..10120Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6918 9991..10120 +
1691679693.5138447-UTR-H-elongata_contig6918:9990..101201691679693.5138447-UTR-H-elongata_contig6918:9990..10120Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6918 9991..10120 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931089.3105593-CDS-H-elongata_contig6918:7603..76441622931089.3105593-CDS-H-elongata_contig6918:7603..7644Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6918 7604..7644 +
1691679693.4624608-CDS-H-elongata_contig6918:7603..76441691679693.4624608-CDS-H-elongata_contig6918:7603..7644Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6918 7604..7644 +
1622931089.3306963-CDS-H-elongata_contig6918:7963..81541622931089.3306963-CDS-H-elongata_contig6918:7963..8154Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6918 7964..8154 +
1691679693.470052-CDS-H-elongata_contig6918:7963..81541691679693.470052-CDS-H-elongata_contig6918:7963..8154Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6918 7964..8154 +
1622931089.3491805-CDS-H-elongata_contig6918:8485..93241622931089.3491805-CDS-H-elongata_contig6918:8485..9324Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6918 8486..9324 +
1691679693.4781792-CDS-H-elongata_contig6918:8485..93241691679693.4781792-CDS-H-elongata_contig6918:8485..9324Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6918 8486..9324 +
1622931089.3672612-CDS-H-elongata_contig6918:9360..95341622931089.3672612-CDS-H-elongata_contig6918:9360..9534Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6918 9361..9534 +
1691679693.4864454-CDS-H-elongata_contig6918:9360..95341691679693.4864454-CDS-H-elongata_contig6918:9360..9534Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6918 9361..9534 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig6918.14568.1prot_H-elongata_contig6918.14568.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig6918 7604..9534 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig6918.14568.1

>prot_H-elongata_contig6918.14568.1 ID=prot_H-elongata_contig6918.14568.1|Name=mRNA_H-elongata_contig6918.14568.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=415bp
MMCSALIEWPEYRSRVLFGGSGFIPGVFLLQCWIERAWANGFDPEGCEQL
GGPGALMGSEKWIGATECAALLRQAEHTDVIDFESSAAAQLKTSRRLDTK
VERANADSYAVCAPGSRHEQPDPPGTAVRRDLVRSSPANPTQQQQSIRSY
FPPRDAQGGRGRPGSGDCSIVSRPVGGLFVSPSAGARPGCYRGLERRGPP
PGHSDSNNSVQGRGVDGKTCLWRRSSRQTLGGGRWRGKRKDGQGGRGDAD
IIREAGWRMGGAIVEWAWEYFCTPWDDVGTVADDSRGCPTQPRGGSCGAE
SYAKTGRPRPREVRMSGLAKEPAWGMTETPARKCTVEGGGSTGGDCEVFA
SGGGGTPKQSENARATLTRPPPPLYFQHDGHSRSIVGVLWPGGGWSSRRS
RKRKMVSCWSRRWS*
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mRNA from alignment at H-elongata_contig6918:7298..10120+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig6918.14568.1 ID=mRNA_H-elongata_contig6918.14568.1|Name=mRNA_H-elongata_contig6918.14568.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2823bp|location=Sequence derived from alignment at H-elongata_contig6918:7298..10120+ (Himanthalia elongata Himel1 dioecious)
GTGATTCCCACGGCCGAAGAACTGACGGCAAGAACTATATCAGAGGCGGG
GGACGATCAGGCAGCTACGAAAGGCCTCATCCCCCGAGTACAGCAACGCC
TCATCGACGAACACAGGGGGAAAATAGGCGAAGGAATCGGGGACGGCCGG
GTGCCACGAGCAGGCCGCGGCAGAGAGGACTTGGCGTGGCGCAAGAACGG
CGCCCGCGAGACCGCAGAATGGCGTTTTTGTGACCCGCGCACAACGCACT
GTACGCAACGAGGGTTCCAGGGATCGAAGTTCTCGTGCGGGTACCGAAAC
ATCCAGATGATGTGCTCCGCGCTGATAGAATGGCCGGAGTACCGCAGGTA
GGCGAGACGTTTTCCTAGACTTTCGGTCCTCGCTCGTTCGAATAGCAAGA
AAAGATTGGAACGTCTCGTTACGGACCGTGGTGCATCTTCATTGGCCGAA
ACATTCCGGGAGCGAATTCTCCGACATCGTTTCGCCGCCACCCTCCTCGC
CCTTCCTAACGGGGAGTAGGGCGTAACCCCCTTATAGTTACACAATTAAC
ACGGGCGCCTGAAGGCCGCGCTTTCGTCCTTGCACCTACACTCTCATAAT
TTTTGCCCTGACTTGTTCGCGGCACGCCTCCTTATCTCCTACCGCAATTT
AAACATCACTAAAAAGCAGAGTGTTGTTCGGAGGCAGCGGATTTATCCCC
GGAGTTTTCCTGCTGCAGTGTTGGATAGAAAGGGCGTGGGCAAATGGCTT
CGACCCAGAGGGCTGCGAGCAGCTCGGCGGACCCGGGGCGCTCATGGGTA
GCGAGAAATGGATTGGGGCGACAGAGTGCGCCGCTCTCCTGAGGCAAGCA
GAACATAGTAATTATGGAGGCCAGCGCCCTGCTGGCGATTTTTATGCTCG
CGTGTAGGTGTGTCGTCTCGCGGATGCCAGCACCACGTCCCGAGGGCGTT
CAAAAGAAAGAGACGTTGGATAGCGTGTCGAAATAATTCCCGCGCTCGGT
TCAAAATGTTTGGCACCGAACTTTGTAACCGTCGATTTCCTGGATGCAAC
GCGATCCGATCTGCTCCTGACCGCAACGCAACCGAAATCAAGCATCAGGC
GTTTTGTTCACCCCTCAACGTCCAACGCCGAACGCTCTTCGTCACCCTTT
TCCATTCCGTACTTGCCACAGATCCTTCGGGGTGAAAGCGGACGTGATCG
ACTTTGAATCTTCCGCCGCTGCTCAGCTCAAAACATCCAGACGACTAGAC
ACAAAGGTGGAACGTGCCAACGCTGACTCCTATGCTGTCTGCGCACCGGG
CAGTAGGCACGAGCAACCCGACCCCCCGGGGACAGCCGTCCGACGCGATC
TTGTTCGCTCCTCTCCCGCGAACCCCACCCAACAGCAACAGTCAATCAGG
TCGTACTTCCCGCCAAGAGATGCTCAAGGGGGAAGGGGTAGGCCTGGAAG
TGGCGATTGTAGCATCGTTTCCAGGCCCGTGGGCGGTTTGTTTGTGTCTC
CAAGCGCCGGAGCACGCCCGGGCTGCTACAGAGGACTGGAGCGGAGGGGA
CCCCCCCCTGGCCACTCTGATTCGAATAATTCAGTCCAGGGTAGAGGAGT
CGACGGTAAGACGTGCCTGTGGCGGAGAAGCAGTCGGCAGACGCTCGGTG
GGGGACGCTGGCGGGGGAAAAGGAAAGATGGGCAAGGTGGCAGAGGAGAC
GCGGACATCATAAGGGAAGCGGGGTGGCGAATGGGCGGGGCGATCGTAGA
GTGGGCGTGGGAGTACTTTTGCACGCCCTGGGATGACGTAGGGACCGTTG
CTGACGACTCTCGCGGTTGCCCCACCCAGCCGCGAGGAGGTTCGTGCGGC
GCAGAGTCGTACGCAAAGACCGGGCGGCCTAGACCTCGGGAAGTCAGGAT
GTCGGGCTTGGCGAAGGAACCCGCGTGGGGCATGACTGAGACGCCGGCAC
GGAAATGTACCGTCGAGGGTGGGGGGAGCACGGGCGGAGATTGCGAGGTT
TTTGCTAGCGGAGGAGGAGGAACGCCAGTGGCGATCGGACAACAGCAAAT
GTGGAAGAGCAAGAAACAAAGCGAAAATGCTCGCGCGACCCTAACTCGAC
CCCCGCCTCCCCTCTACTTCCAGCACGACGGACACTCCAGGTCTATTGTA
GGGGTGCTCTGGCCGGGGGGGGGGTGGTCAAGCCGTCGGTCACGGAAGCG
GAAGATGGTTTCCTGCTGGAGCCGGCGCTGGTCGTAGCGTCGAAGGCAGA
GGTGTTTATCCTCGGCAGCCGGGGAGTTTGCTGGTGTTCGACCCGTCTCA
GCAGGGGCGTGACATCCGTGAAGCACTCGACGGCAAAGGGACGAAACGAA
CATGGAACAGGTAATAAGACGATACTATACTATTAATAATATAATAGTTG
GGCAGCGAAGAGGGTCTCTTCGAGTCACGATCAGTCAACCAAGAGACATG
GCGCGCGTGGCTTCTTCGCCCACAAGCGCTTTGCGTCGCTCGGTGGAGAT
TCGGCTGCTCCACGACGCCACCAGAAAATAAGCTTGTCGCGTGCACCCGA
TAACTAGTCGTTGGGACGTCTGAGTGCGCCCAAGGTAGATTTGGACGCTG
CGATGTACTTTATTCTACCCACGGGCCTCCTGGTTCTCCTCCCATCTATT
ATTTCCCCCATATAATCTCATCCCTCCCCGTTGCGTGTCCCAGTCTCTTG
AAGCGAGGGGAAAGCGTTTTGCGCAGACGACAGTTTCAAGTGGTCGCCGT
CCGACCAGGGTTGATCGAGGCCAGGCGTGCCGGCGACTGGAAAAAGTTGT
CCTCGTCCAAGATAAGCGTCGAC
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Coding sequence (CDS) from alignment at H-elongata_contig6918:7298..10120+

>mRNA_H-elongata_contig6918.14568.1 ID=mRNA_H-elongata_contig6918.14568.1|Name=mRNA_H-elongata_contig6918.14568.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2490bp|location=Sequence derived from alignment at H-elongata_contig6918:7298..10120+ (Himanthalia elongata Himel1 dioecious)
ATGATGTGCTCCGCGCTGATAGAATGGCCGGAGTACCGCAGATGATGTGC
TCCGCGCTGATAGAATGGCCGGAGTACCGCAGCAGAGTGTTGTTCGGAGG
CAGCGGATTTATCCCCGGAGTTTTCCTGCTGCAGTGTTGGATAGAAAGGG
CGTGGGCAAATGGCTTCGACCCAGAGGGCTGCGAGCAGCTCGGCGGACCC
GGGGCGCTCATGGGTAGCGAGAAATGGATTGGGGCGACAGAGTGCGCCGC
TCTCCTGAGGCAAGCAGAACATACAGAGTGTTGTTCGGAGGCAGCGGATT
TATCCCCGGAGTTTTCCTGCTGCAGTGTTGGATAGAAAGGGCGTGGGCAA
ATGGCTTCGACCCAGAGGGCTGCGAGCAGCTCGGCGGACCCGGGGCGCTC
ATGGGTAGCGAGAAATGGATTGGGGCGACAGAGTGCGCCGCTCTCCTGAG
GCAAGCAGAACATACGGACGTGATCGACTTTGAATCTTCCGCCGCTGCTC
AGCTCAAAACATCCAGACGACTAGACACAAAGGTGGAACGTGCCAACGCT
GACTCCTATGCTGTCTGCGCACCGGGCAGTAGGCACGAGCAACCCGACCC
CCCGGGGACAGCCGTCCGACGCGATCTTGTTCGCTCCTCTCCCGCGAACC
CCACCCAACAGCAACAGTCAATCAGGTCGTACTTCCCGCCAAGAGATGCT
CAAGGGGGAAGGGGTAGGCCTGGAAGTGGCGATTGTAGCATCGTTTCCAG
GCCCGTGGGCGGTTTGTTTGTGTCTCCAAGCGCCGGAGCACGCCCGGGCT
GCTACAGAGGACTGGAGCGGAGGGGACCCCCCCCTGGCCACTCTGATTCG
AATAATTCAGTCCAGGGTAGAGGAGTCGACGGTAAGACGTGCCTGTGGCG
GAGAAGCAGTCGGCAGACGCTCGGTGGGGGACGCTGGCGGGGGAAAAGGA
AAGATGGGCAAGGTGGCAGAGGAGACGCGGACATCATAAGGGAAGCGGGG
TGGCGAATGGGCGGGGCGATCGTAGAGTGGGCGTGGGAGTACTTTTGCAC
GCCCTGGGATGACGTAGGGACCGTTGCTGACGACTCTCGCGGTTGCCCCA
CCCAGCCGCGAGGAGGTTCGTGCGGCGCAGAGTCGTACGCAAAGACCGGG
CGGCCTAGACCTCGGGAAGTCAGGATGTCGGGCTTGGCGAAGGAACCCGC
GTGGGGCATGACTGAGACGCCGGCACGGAAATGTACCGTCGAGGGTGGGG
GGAGCACGGGCGGAGATTGCGAGGTTTTTGCTAGCGGAGGAGGAGGAACG
CCACGGACGTGATCGACTTTGAATCTTCCGCCGCTGCTCAGCTCAAAACA
TCCAGACGACTAGACACAAAGGTGGAACGTGCCAACGCTGACTCCTATGC
TGTCTGCGCACCGGGCAGTAGGCACGAGCAACCCGACCCCCCGGGGACAG
CCGTCCGACGCGATCTTGTTCGCTCCTCTCCCGCGAACCCCACCCAACAG
CAACAGTCAATCAGGTCGTACTTCCCGCCAAGAGATGCTCAAGGGGGAAG
GGGTAGGCCTGGAAGTGGCGATTGTAGCATCGTTTCCAGGCCCGTGGGCG
GTTTGTTTGTGTCTCCAAGCGCCGGAGCACGCCCGGGCTGCTACAGAGGA
CTGGAGCGGAGGGGACCCCCCCCTGGCCACTCTGATTCGAATAATTCAGT
CCAGGGTAGAGGAGTCGACGGTAAGACGTGCCTGTGGCGGAGAAGCAGTC
GGCAGACGCTCGGTGGGGGACGCTGGCGGGGGAAAAGGAAAGATGGGCAA
GGTGGCAGAGGAGACGCGGACATCATAAGGGAAGCGGGGTGGCGAATGGG
CGGGGCGATCGTAGAGTGGGCGTGGGAGTACTTTTGCACGCCCTGGGATG
ACGTAGGGACCGTTGCTGACGACTCTCGCGGTTGCCCCACCCAGCCGCGA
GGAGGTTCGTGCGGCGCAGAGTCGTACGCAAAGACCGGGCGGCCTAGACC
TCGGGAAGTCAGGATGTCGGGCTTGGCGAAGGAACCCGCGTGGGGCATGA
CTGAGACGCCGGCACGGAAATGTACCGTCGAGGGTGGGGGGAGCACGGGC
GGAGATTGCGAGGTTTTTGCTAGCGGAGGAGGAGGAACGCCAAAACAAAG
CGAAAATGCTCGCGCGACCCTAACTCGACCCCCGCCTCCCCTCTACTTCC
AGCACGACGGACACTCCAGGTCTATTGTAGGGGTGCTCTGGCCGGGGGGG
GGGTGGTCAAGCCGTCGGTCACGGAAGCGGAAGATGGTTTCCTGCTGGAG
CCGGCGCTGGTCGTAGAAACAAAGCGAAAATGCTCGCGCGACCCTAACTC
GACCCCCGCCTCCCCTCTACTTCCAGCACGACGGACACTCCAGGTCTATT
GTAGGGGTGCTCTGGCCGGGGGGGGGGTGGTCAAGCCGTCGGTCACGGAA
GCGGAAGATGGTTTCCTGCTGGAGCCGGCGCTGGTCGTAG
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