mRNA_H-elongata_contig69174.14565.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig69174.14565.1
Unique NamemRNA_H-elongata_contig69174.14565.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig69174.14565.1 vs. uniprot
Match: A0A6H5JT01_9PHAE (Phosphorylase kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT01_9PHAE)

HSP 1 Score: 336 bits (861), Expect = 1.000e-112
Identity = 165/201 (82.09%), Postives = 185/201 (92.04%), Query Frame = 1
Query:    7 VVADVLGTGAFSVVKSAVR-SDGVKAAVKVVDRRKLGKSDMEAMRNEARLLKELDHPNIVKLYGWYEEPTMLYMALEMCEGGELFDRIVSKTYYNEKEARDLVRTLLRTVKHLHDQNIIHRDLKPENLLLVDKKNDANLKVADFGFAKKHNSRSDVLRAQCGTPGYVAPEILKSRPYGAPVDMWSIGVITYILLGGYPPFH 606
            VV D LG GAFS+VK A R SD  K+AVK+V+RR LGK D+EA+R+EARLL ELDHPNIVKL+GWYEE   LYMALE+CEGGELFDRIVSKT+YNEKEARDLVRTLLRTVK+LHDQNIIHRDLKPENLLLVDK+++ANLK+ADFGFAKKH++RS+VL+ QCGTPGYVAPEILKS PYG+PVDMWSIGVITYILLGGYPPFH
Sbjct:   20 VVPDELGKGAFSIVKVATRISDRQKSAVKIVERRNLGKGDLEALRSEARLLGELDHPNIVKLHGWYEEEKSLYMALELCEGGELFDRIVSKTFYNEKEARDLVRTLLRTVKYLHDQNIIHRDLKPENLLLVDKEDNANLKIADFGFAKKHDARSEVLKTQCGTPGYVAPEILKSTPYGSPVDMWSIGVITYILLGGYPPFH 220          
BLAST of mRNA_H-elongata_contig69174.14565.1 vs. uniprot
Match: D8LE50_ECTSI (Phosphorylase kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE50_ECTSI)

HSP 1 Score: 337 bits (864), Expect = 7.280e-110
Identity = 165/203 (81.28%), Postives = 186/203 (91.63%), Query Frame = 1
Query:    1 DFVVADVLGTGAFSVVKSAVR-SDGVKAAVKVVDRRKLGKSDMEAMRNEARLLKELDHPNIVKLYGWYEEPTMLYMALEMCEGGELFDRIVSKTYYNEKEARDLVRTLLRTVKHLHDQNIIHRDLKPENLLLVDKKNDANLKVADFGFAKKHNSRSDVLRAQCGTPGYVAPEILKSRPYGAPVDMWSIGVITYILLGGYPPFH 606
            ++ + D LG GAFS+VK A R SD  K+AVKVV+RR LGK D+EA+R+EARLL ELDHPNIVKL+GWYEE   LYMALE+CEGGELFDRIVSKT+YNEKEARDLVRTLLRTVKHLHDQNIIHRDLKPENLLLVDK+++ANLK+ADFGFAKKH++RS+VL+ QCGTPGYVAPEILKS PYG+PVDMWSIGVITYILLGGYPPFH
Sbjct:   17 EYHLGDELGKGAFSIVKVATRISDRQKSAVKVVERRSLGKGDLEALRSEARLLGELDHPNIVKLHGWYEEEKTLYMALELCEGGELFDRIVSKTFYNEKEARDLVRTLLRTVKHLHDQNIIHRDLKPENLLLVDKQDNANLKIADFGFAKKHDARSEVLKTQCGTPGYVAPEILKSTPYGSPVDMWSIGVITYILLGGYPPFH 219          
BLAST of mRNA_H-elongata_contig69174.14565.1 vs. uniprot
Match: A0A835YSJ7_9STRA (Phosphorylase kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSJ7_9STRA)

HSP 1 Score: 258 bits (660), Expect = 2.250e-79
Identity = 131/205 (63.90%), Postives = 154/205 (75.12%), Query Frame = 1
Query:    4 FVVADVLGTGAFSVVKSAVR-SDGVKAAVKVVDRRKLGKSDMEAMRNEARLLKELDHPNIVKLYGWYEEPTMLYMALEMCEGGELFDRIVSKTYYNEKEARDLVRTLLRTVKHLHDQNIIHRDLKPENLLLVDKKNDANLKVADFGFAKKHNSRSDVLRAQCGTPGYVAPEILKSRPYGAPVDMWSIGVITYILLGGYPPFHGKR 615
            F +  VLG GAFS V  A R SDG + A KVV RRKL   D  A+R+EA++L  LDHPNIV+L GWYEE  + Y+ LE+CEGGELFDRIV K+ Y E+EARDLVR LL  + + H++ I+HRDLKPENLLLV K++DA +KVADFGFAK  N     L  QCGTPGYVAPEILK +PYG  VDMWS+GVI YILLGGYPPFH + 
Sbjct:   28 FTIGPVLGKGAFSTVHLATRNSDGRRFATKVVSRRKLPPVDEAALRSEAKVLMALDHPNIVRLVGWYEEKDVFYVPLELCEGGELFDRIVQKSCYTEREARDLVRMLLEAIAYCHERGIMHRDLKPENLLLVSKEDDATIKVADFGFAKVANIPKG-LHTQCGTPGYVAPEILKRQPYGKEVDMWSVGVICYILLGGYPPFHDEN 231          
BLAST of mRNA_H-elongata_contig69174.14565.1 vs. uniprot
Match: A0A7S2XV40_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XV40_9STRA)

HSP 1 Score: 243 bits (620), Expect = 1.620e-76
Identity = 121/199 (60.80%), Postives = 148/199 (74.37%), Query Frame = 1
Query:   22 LGTGAFSVVKSAV-RSDGVKAAVKVVDRRKLGKSDMEAMRNEARLLKELDHPNIVKLYGWYEEPTMLYMALEMCEGGELFDRIVSKTYYNEKEARDLVRTLLRTVKHLHDQNIIHRDLKPENLLLVDKKNDANLKVADFGFAKKHNSRSDVLRAQCGTPGYVAPEILKSRPYGAPVDMWSIGVITYILLGGYPPFHGKR 615
            LG+G+FS V+  V + +G + AVK+V R  L   D EA+  E  +LK +DHPNI+KLY ++EE    Y+ +E+ EGGELFDRIV KTYYNEKEARDLV  LL  +K  HD  I+HRDLKPENLLL   K+DA++K+ADFGFA++    S+ L  QCGTPGYVAPEIL   PYG  VDMWSIGVITYILLGGYPPFH ++
Sbjct:   34 LGSGSFSTVREGVSKLNGERFAVKIVKRMDLPPDDEEALIEEVTILKHVDHPNIIKLYEFFEEKHFYYLVIELMEGGELFDRIVQKTYYNEKEARDLVHILLSAIKFCHDNGIVHRDLKPENLLLTSSKDDASIKIADFGFARQVKE-SNNLTTQCGTPGYVAPEILNGVPYGLAVDMWSIGVITYILLGGYPPFHDEK 231          
BLAST of mRNA_H-elongata_contig69174.14565.1 vs. uniprot
Match: A0A835YM32_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM32_9STRA)

HSP 1 Score: 251 bits (640), Expect = 2.410e-76
Identity = 129/205 (62.93%), Postives = 154/205 (75.12%), Query Frame = 1
Query:    4 FVVADVLGTGAFSVVKSAVR-SDGVKAAVKVVDRRKLGKSDMEAMRNEARLLKELDHPNIVKLYGWYEEPTMLYMALEMCEGGELFDRIVSKTYYNEKEARDLVRTLLRTVKHLHDQNIIHRDLKPENLLLVDKKNDANLKVADFGFAKKHNSRSDVLRAQCGTPGYVAPEILKSRPYGAPVDMWSIGVITYILLGGYPPFHGKR 615
            + +  VLG GAFS V  A R SDG + A KVV RRKL   D  A+R EA++L ELDHPNIV+L  WYEE  + Y+ LE+CEGGELFDRIV K+ Y EKEARDLV  LL  + + H+++I+HRDLKPENLLLV K +DAN+KVADFGFAK  ++ S  L  QCGTPGYVAPEILK +PYG  VD+WS+GVI YILLGGYPPF  + 
Sbjct:   36 YELGPVLGKGAFSTVHLATRRSDGARYATKVVSRRKLPAIDEAALRLEAKVLLELDHPNIVRLVAWYEEKEVFYVLLELCEGGELFDRIVRKSCYTEKEARDLVTLLLDAIAYCHERDIMHRDLKPENLLLVSKSDDANIKVADFGFAKVADN-SKGLHTQCGTPGYVAPEILKRQPYGKEVDVWSVGVICYILLGGYPPFQDEN 239          
BLAST of mRNA_H-elongata_contig69174.14565.1 vs. uniprot
Match: F0YIW9_AURAN (Protein kinase domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YIW9_AURAN)

HSP 1 Score: 229 bits (583), Expect = 3.010e-72
Identity = 120/201 (59.70%), Postives = 146/201 (72.64%), Query Frame = 1
Query:   22 LGTGAFS-VVKSAVR----SDGVKAAVKVVDRRK-LGKSDMEAMRNEARLLKELDHPNIVKLYGWYEEPTMLYMALEMCEGGELFDRIVSKTYYNEKEARDLVRTLLRTVKHLHDQNIIHRDLKPENLLLVDKKNDANLKVADFGFAKKHNSRSDVLRAQCGTPGYVAPEILKSRPYGAPVDMWSIGVITYILLGGYPPFH 606
            LGTGAFS VVK+  R      G   AVK + +   L   D+ ++R E  +L+ ++HPNI+KLY +YEE  M YM +E+ EGGELF+RIV KT+YNEKEARDL+R LL  + +LH ++I+HRDLKPENLLL    ND ++K+ADFGFAKK N +S  L  QCGTPGYVAPEILK   YG  VDMWS GVI YILLGGYPPFH
Sbjct:    1 LGTGAFSRVVKATKRMANNEAGQAVAVKCITKTPDLKAEDIASLREEVAVLQSIEHPNIIKLYNFYEEKKMFYMVIELMEGGELFERIVKKTFYNEKEARDLIRILLDALAYLHHRHIVHRDLKPENLLLKSPYNDFDIKLADFGFAKKVNGKS--LDTQCGTPGYVAPEILKGAKYGTEVDMWSCGVIVYILLGGYPPFH 199          
BLAST of mRNA_H-elongata_contig69174.14565.1 vs. uniprot
Match: A0A662YH26_9STRA (Phosphorylase kinase n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YH26_9STRA)

HSP 1 Score: 236 bits (602), Expect = 5.180e-72
Identity = 117/202 (57.92%), Postives = 149/202 (73.76%), Query Frame = 1
Query:    4 FVVADVLGTGAFSVVKSAV-RSDGVKAAVKVVDRRKLGKSDMEAMRNEARLLKELDHPNIVKLYGWYEEPTMLYMALEMCEGGELFDRIVSKTYYNEKEARDLVRTLLRTVKHLHDQNIIHRDLKPENLLLVDKKNDANLKVADFGFAKKHNSRSDVLRAQCGTPGYVAPEILKSRPYGAPVDMWSIGVITYILLGGYPPFH 606
            + +  V+G+G FSVV+ AV R  G + A+K + R  L   D+EA+  E  +LK+++HPNI+ L+ ++ E    Y+  E  EGGELFDRIV K+YYNE+EARDLV+ LL  +K+ HD NI+HRDLKPENLLL  K +DA++K+ADFGFAKK    SD L   CGTPGYVAPEIL+ +PYG  VD+WSIGVITYILL GYPPFH
Sbjct:  166 YSLGKVIGSGTFSVVRIAVHRPSGQRYAIKCIKRDGLVAEDIEALTTEVAILKQMNHPNIMILHDFFVEEKFYYLVTEFMEGGELFDRIVEKSYYNEREARDLVKLLLEAIKYCHDANIVHRDLKPENLLLTSKDDDASIKLADFGFAKKVEVDSDGLVTACGTPGYVAPEILEGKPYGKTVDIWSIGVITYILLCGYPPFH 367          
BLAST of mRNA_H-elongata_contig69174.14565.1 vs. uniprot
Match: A0A8K1CFS7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CFS7_PYTOL)

HSP 1 Score: 232 bits (591), Expect = 7.330e-72
Identity = 113/197 (57.36%), Postives = 147/197 (74.62%), Query Frame = 1
Query:   19 VLGTGAFSVVKSAV-RSDGVKAAVKVVDRRKLGKSDMEAMRNEARLLKELDHPNIVKLYGWYEEPTMLYMALEMCEGGELFDRIVSKTYYNEKEARDLVRTLLRTVKHLHDQNIIHRDLKPENLLLVDKKNDANLKVADFGFAKKHNSRSDVLRAQCGTPGYVAPEILKSRPYGAPVDMWSIGVITYILLGGYPPFH 606
            ++G+G FSVV+ A+ R  G K A+K + R  L   D+EA+  E  +LK+++HPNI+ L+ +++E    Y+  E  EGGELFDRIV K+YY+E+EARDLV+ LL ++K+ HD NI+HRDLKPENLLL  K +DA++K+ADFGFAKK    +  L   CGTPGYVAPEIL+  PYG  VD+WSIGVITYILL GYPPFH
Sbjct:   57 MIGSGTFSVVREAIHRPTGQKYAIKCIKREGLTVEDIEALTTEVAILKQMNHPNIMILHDFFQEEKYYYLVTEFMEGGELFDRIVEKSYYSEREARDLVKLLLESIKYCHDANIVHRDLKPENLLLTSKDDDASIKLADFGFAKKIEFDNQGLVTACGTPGYVAPEILEGHPYGKAVDIWSIGVITYILLCGYPPFH 253          
BLAST of mRNA_H-elongata_contig69174.14565.1 vs. uniprot
Match: A0A6V1U2B4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1U2B4_HETAK)

HSP 1 Score: 229 bits (585), Expect = 1.360e-71
Identity = 113/199 (56.78%), Postives = 145/199 (72.86%), Query Frame = 1
Query:   22 LGTGAFSVVKSAV-RSDGVKAAVKVVDRRKLGKSDMEAMRNEARLLKELDHPNIVKLYGWYEEPTMLYMALEMCEGGELFDRIVSKTYYNEKEARDLVRTLLRTVKHLHDQNIIHRDLKPENLLLVDKKNDANLKVADFGFAKKHNSRSDVLRAQCGTPGYVAPEILKSRPYGAPVDMWSIGVITYILLGGYPPFHGKR 615
            LG+G+FS V+  + +    + AVK+V R  L   D EA+  E  +L+ + HPNI+KL+ ++EE    Y+  E+ +GGELFDRIV KT+YNEKEARDLV+ LL  VK+ HD +I+HRDLKPENLLL   ++DA++K+ADFGFA+    R + L  QCGTPGYVAPEIL   PYG  VDMWS GVITYILLGGYPPFH ++
Sbjct:   36 LGSGSFSTVREGINKQTNERFAVKIVKRMDLPLEDEEALIEEVTILRGISHPNIIKLFDFFEEKHFYYLVTELMQGGELFDRIVKKTFYNEKEARDLVKILLSAVKYCHDNDIVHRDLKPENLLLSSAEDDASIKIADFGFARL--LRGNTLTTQCGTPGYVAPEILNGVPYGKSVDMWSCGVITYILLGGYPPFHDEK 232          
BLAST of mRNA_H-elongata_contig69174.14565.1 vs. uniprot
Match: A0A482SGE7_9ARCH (Serine/threonine-protein kinase (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SGE7_9ARCH)

HSP 1 Score: 226 bits (577), Expect = 1.430e-71
Identity = 106/180 (58.89%), Postives = 139/180 (77.22%), Query Frame = 1
Query:   67 DGVKAAVKVVDRRKLGKSDMEAMRNEARLLKELDHPNIVKLYGWYEEPTMLYMALEMCEGGELFDRIVSKTYYNEKEARDLVRTLLRTVKHLHDQNIIHRDLKPENLLLVDKKNDANLKVADFGFAKKHNSRSDVLRAQCGTPGYVAPEILKSRPYGAPVDMWSIGVITYILLGGYPPFH 606
            D  K AVK+V R  L + D E++R E ++L  L++PNIV+ + ++EE    Y+ LE  +GGELFDRIV KT+YNEKEARDLV  +LR +K+LHD ++IHRDLKPENL++  K++DAN+K+ADFGFA K N  +  +  QCGTPGY+APEI++++ YG PVDMWS GVI YILLGGYPPFH
Sbjct:   10 DKKKVAVKIVTRNGLSQDDEESLRAEVKILTALNYPNIVRAFDFFEEEKFFYVVLEYLDGGELFDRIVKKTFYNEKEARDLVVIILRAIKYLHDMDVIHRDLKPENLIMTSKEDDANVKIADFGFAVKCNGCN--ITTQCGTPGYIAPEIIETKAYGKPVDMWSFGVILYILLGGYPPFH 187          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig69174.14565.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JT01_9PHAE1.000e-11282.09Phosphorylase kinase n=1 Tax=Ectocarpus sp. CCAP 1... [more]
D8LE50_ECTSI7.280e-11081.28Phosphorylase kinase n=1 Tax=Ectocarpus siliculosu... [more]
A0A835YSJ7_9STRA2.250e-7963.90Phosphorylase kinase n=1 Tax=Tribonema minus TaxID... [more]
A0A7S2XV40_9STRA1.620e-7660.80Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835YM32_9STRA2.410e-7662.93Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
F0YIW9_AURAN3.010e-7259.70Protein kinase domain-containing protein (Fragment... [more]
A0A662YH26_9STRA5.180e-7257.92Phosphorylase kinase n=2 Tax=Nothophytophthora sp.... [more]
A0A8K1CFS7_PYTOL7.330e-7257.36Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A6V1U2B4_HETAK1.360e-7156.78Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A482SGE7_9ARCH1.430e-7158.89Serine/threonine-protein kinase (Fragment) n=1 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig69174contigH-elongata_contig69174:316..2785 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score340.9
Seed ortholog evalue4.3e-91
Seed eggNOG ortholog2880.D8LE50
KEGG koko:K04373,ko:K04445
KEGG Pathwayko04010,ko04114,ko04150,ko04261,ko04668,ko04713,ko04714,ko04720,ko04722,ko04914,ko04931,ko05200,ko05206,ko05219,map04010,map04114,map04150,map04261,map04668,map04713,map04714,map04720,map04722,map04914,map04931,map05200,map05206,map05219
EggNOG free text desc.protein serine/threonine kinase activity
EggNOG OGsKOG0603@1,KOG0603@2759
EC2.7.11.1
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001,ko03019
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionSerine/threonine/dual specificity protein kinase, catalytic domain
Ec32 orthologEc-00_000950.1
Exons4
Model size636
Cds size636
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig69174.14565.1prot_H-elongata_contig69174.14565.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig69174 316..2785 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931088.9096105-CDS-H-elongata_contig69174:315..4521622931088.9096105-CDS-H-elongata_contig69174:315..452Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig69174 316..452 -
1691679693.27879-CDS-H-elongata_contig69174:315..4521691679693.27879-CDS-H-elongata_contig69174:315..452Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig69174 316..452 -
1622931088.9242876-CDS-H-elongata_contig69174:671..7951622931088.9242876-CDS-H-elongata_contig69174:671..795Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig69174 672..795 -
1691679693.2899585-CDS-H-elongata_contig69174:671..7951691679693.2899585-CDS-H-elongata_contig69174:671..795Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig69174 672..795 -
1622931088.943445-CDS-H-elongata_contig69174:1778..19091622931088.943445-CDS-H-elongata_contig69174:1778..1909Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig69174 1779..1909 -
1691679693.299372-CDS-H-elongata_contig69174:1778..19091691679693.299372-CDS-H-elongata_contig69174:1778..1909Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig69174 1779..1909 -
1622931088.9619575-CDS-H-elongata_contig69174:2541..27851622931088.9619575-CDS-H-elongata_contig69174:2541..2785Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig69174 2542..2785 -
1691679693.310022-CDS-H-elongata_contig69174:2541..27851691679693.310022-CDS-H-elongata_contig69174:2541..2785Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig69174 2542..2785 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig69174.14565.1

>prot_H-elongata_contig69174.14565.1 ID=prot_H-elongata_contig69174.14565.1|Name=mRNA_H-elongata_contig69174.14565.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=212bp
DFVVADVLGTGAFSVVKSAVRSDGVKAAVKVVDRRKLGKSDMEAMRNEAR
LLKELDHPNIVKLYGWYEEPTMLYMALEMCEGGELFDRIVSKTYYNEKEA
RDLVRTLLRTVKHLHDQNIIHRDLKPENLLLVDKKNDANLKVADFGFAKK
HNSRSDVLRAQCGTPGYVAPEILKSRPYGAPVDMWSIGVITYILLGGYPP
FHGKRTPSTVL*
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mRNA from alignment at H-elongata_contig69174:316..2785-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig69174.14565.1 ID=mRNA_H-elongata_contig69174.14565.1|Name=mRNA_H-elongata_contig69174.14565.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2470bp|location=Sequence derived from alignment at H-elongata_contig69174:316..2785- (Himanthalia elongata Himel1 dioecious)
GACTTTGTTGTTGCAGATGTGTTGGGGACCGGGGCATTTTCTGTTGTGAA GTCAGCCGTGAGATCGGACGGCGTTAAGGCCGCCGTGAAGGTCGTCGACC GACGAAAGCTCGGAAAGAGCGATATGGAGGCCATGCGCAACGAAGCGAGA TTACTGAAAGAGCTCGACCACCCAAACATCGTGAAGCTGTACGGTTGGTA CGAGGAGCCAACGATGCTGTATATGGCGCTAGAGATGTGTGAAGGTGCGA GGATCCCATGATTGACCCCCCGCCTCCCCCCCCCCCCCCCCCCCGCTCGG GCTCGGGCCCGGGTCCCCCCCCTCCTGTTCCCCNNNNNNNNNNGAGGCGT TTTTTGGGGCTAAAGAGGTGTGAGGGTGCGGGGAGCCCATGTTTTCCCCC CCCCCCCCCCCCCCCCCCCCCTGAGCCTGGGCCTGGGCCTGGTCTCCATC TTCTGGTTTGCAACGTATCTGTGTGACTTGTCTAACTGTGGTGCGGTCGT TTTTGCCGATTCCCTTGATGGAATTGCCCCTGGGAGGCGGGGTTATCGTG ATGGATGTATCGGTGATTTGCGTGTGGAGATTTATTTATTTTTTTGCGAT GTTATTATTTTAAAACATATGAACTCATTCCAACCCTCGGAACATCCACC ACCTTTTTGGCACCATGAGGAGAGGAGGTGTAGTGCAGTGTAGTCCAGGG AACCAACTATCGTCAGGTTCGAATGTCGACACTTTAAATACACTTGAGCC CAAAATCGCCATATGTGATTATTCATGATATAGGAATGATATAGGAATGT CAACCCAGAGTATTGGGAGTGAACTAATTGTGTTTGGTGGTTATTGTTGC TGTTGCTGTTGCTTATCTTTGTAAAGGTGGCGAGCTATTCGATCGCATCG TTTCCAAAACATACTACAACGAGAAGGAAGCCAGAGACCTCGTACGGACG CTGCTGCGAACCGTGAAGCATCTGCACGACCAAAATATCATACACCGCGA CCTCAAGGTAAGGTGCTTTGCTGAGCTGAGCTGAGCTGAGCTGATGAGCT TTTTCTCTCTTTCACACACTCGCTCTCGATGTGTAGATTGTATTACTATT ACTAAATAGATAGGTACCATGTACTAGTGTGTACAATAATGGTACGCCTC CGATACTACTATAGTTCATACTGTATCGATAGTGCATGTCCACTGTGCTG TACCCATAGTGGGTGTGGGAAAATAGAGGCGTACAATAATTGGTCCATGG GGTTACCTGAATAGGCTTGCATCCGTTACTCAAGCTATCTTGAGGACTGC TGGCTCAGTGCCGACTGACTCTCGGTGGTAAACGCCATCGGTAGGCAATT GCGTGACCTGATGAACTCGGATTTAGCCCGATGGCGGTTGACGGTAGAGA TGGATGCCGTTGCGGAAAACGAGAGGATCGAAAGAACCCCGAGAGTACGC GCCATATTCAGCTTGGGCTGAGAGAATGAGCAGGGTAACGCGGGACGAGA CGGCCGAACCCGTCTCGCGAAACAAAATTTTCAGGCGCGAACGGAGACGA GGAAAGAATATTTTCCCTGTCCAGCTGACCACTAGCAGAAGGCAAACAAA TCTGTTTCATCCTTACTATACAAGTATGTGATAAACACACACATGTACTG TGCTTGTATGATTTACACCTAAAGAGGAGATGAGAGGAGAGGAGTGTGGA GCACTATAGTAGGCCGCTTTGCTCTTGTTGACTATTTTAAAGTTATGTCC TTACCACGCTATATTGGACGCTGTACGCCAAACGGCCATCTTCGCCCGCA AATGTAGACGTCTCCGTTGGGTTGTATTGAGTTTTCATGCCATGTCTTGC CTTGTCTTGCCATGCCGTACCGCGACTAATAATTTTGTACTTACCCCCAC TGTACTAATAGTAGTACACTTCGGTCTATCCTCGGATAAAATCGTACTTG TTCTCATTATCCTTGATGCTCTTGATTTTGGCCTTTCCAGCCGGAAAACT TGCTGTTGGTGGATAAAAAGAATGACGCCAACCTCAAGGTCGCTGATTTC GGTTTCGCCAAGAAGCACAACTCGAGGTCGGACGTCCTTCGAGCTCAATG CGGCACACCCGGATGTGAGCAAAGACATGCACTCGTTGGAACTAACTGCC CGCTCGATAATGTATCGGATGGTGTGGTTTACCATTCCTCGGCGATCGTC GGCGATACATTTGGATACCATTTGTCGGCGATACCTTTGGATCCCTTCGA CGCTCCTCTTTCCTCTGTCCAAGTGATGCTACAAGCTACAATAACGCCTT CCTGATTGCCTTGAAATGCTTCGCTCTACCCAGATGTCGCCCCAGAAATC CTCAAGTCTAGGCCTTACGGCGCTCCTGTGGACATGTGGAGCATCGGCGT TATCACGTATATCCTTCTTGGGGGCTACCCCCCCTTTCACGGTAAGAGGA CGCCTTCCACGGTGTTATAG
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Coding sequence (CDS) from alignment at H-elongata_contig69174:316..2785-

>mRNA_H-elongata_contig69174.14565.1 ID=mRNA_H-elongata_contig69174.14565.1|Name=mRNA_H-elongata_contig69174.14565.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1272bp|location=Sequence derived from alignment at H-elongata_contig69174:316..2785- (Himanthalia elongata Himel1 dioecious)
GACTTTGTTGTTGCAGATGTGTTGGGGACCGGGGCATTTTCTGTTGTGAA
GTCAGCCGTGAGATCGGACGGCGTTAAGGCCGCCGTGAAGGTCGTCGACC
GACGAAAGCTCGGAAAGAGCGATATGGAGGCCATGCGCAACGAAGCGAGA
TTACTGAAAGAGCTCGACCACCCAAACATCGTGAAGCTGTACGGTTGGTA
CGAGGAGCCAACGATGCTGTATATGGCGCTAGAGATGTGTGAAGGACTTT
GTTGTTGCAGATGTGTTGGGGACCGGGGCATTTTCTGTTGTGAAGTCAGC
CGTGAGATCGGACGGCGTTAAGGCCGCCGTGAAGGTCGTCGACCGACGAA
AGCTCGGAAAGAGCGATATGGAGGCCATGCGCAACGAAGCGAGATTACTG
AAAGAGCTCGACCACCCAAACATCGTGAAGCTGTACGGTTGGTACGAGGA
GCCAACGATGCTGTATATGGCGCTAGAGATGTGTGAAGGTGGCGAGCTAT
TCGATCGCATCGTTTCCAAAACATACTACAACGAGAAGGAAGCCAGAGAC
CTCGTACGGACGCTGCTGCGAACCGTGAAGCATCTGCACGACCAAAATAT
CATACACCGCGACCTCAAGGTGGCGAGCTATTCGATCGCATCGTTTCCAA
AACATACTACAACGAGAAGGAAGCCAGAGACCTCGTACGGACGCTGCTGC
GAACCGTGAAGCATCTGCACGACCAAAATATCATACACCGCGACCTCAAG
CCGGAAAACTTGCTGTTGGTGGATAAAAAGAATGACGCCAACCTCAAGGT
CGCTGATTTCGGTTTCGCCAAGAAGCACAACTCGAGGTCGGACGTCCTTC
GAGCTCAATGCGGCACACCCGGATCCGGAAAACTTGCTGTTGGTGGATAA
AAAGAATGACGCCAACCTCAAGGTCGCTGATTTCGGTTTCGCCAAGAAGC
ACAACTCGAGGTCGGACGTCCTTCGAGCTCAATGCGGCACACCCGGATAT
GTCGCCCCAGAAATCCTCAAGTCTAGGCCTTACGGCGCTCCTGTGGACAT
GTGGAGCATCGGCGTTATCACGTATATCCTTCTTGGGGGCTACCCCCCCT
TTCACGGTAAGAGGACGCCTTCCACGGTGTTATAGATGTCGCCCCAGAAA
TCCTCAAGTCTAGGCCTTACGGCGCTCCTGTGGACATGTGGAGCATCGGC
GTTATCACGTATATCCTTCTTGGGGGCTACCCCCCCTTTCACGGTAAGAG
GACGCCTTCCACGGTGTTATAG
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