mRNA_H-elongata_contig6801.14424.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig6801.14424.1
Unique NamemRNA_H-elongata_contig6801.14424.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig6801.14424.1 vs. uniprot
Match: D7G4Q4_ECTSI (Mtg2, mitochondrial Obg/CtgA-like GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Q4_ECTSI)

HSP 1 Score: 348 bits (892), Expect = 2.970e-115
Identity = 183/255 (71.76%), Postives = 210/255 (82.35%), Query Frame = 1
Query:    1 QFVDKVRIVANGGKGGNGCISLEGESATKKRPSGGTGGAGGNVYAIADNSLETLDSKLHHFNGQPGXXXXXXXXXXXXXKNTYVRVPCGTLVFEVTAKEQAYGGFHPWSLAEGIECGGGKGEGEG--GTEDHREYGHRNDEYEGQEDGEKGE---MRSVADLEKHGERVLLASGGKPGLGNLNMASRRVGTKLPGQRGESRHYQFELRTIADVGLVGYPNAGKSTLLGCITAAKPKVAMYPFTTLTPVVGHVEYS 750
            +FVDK+RI+A+GGKGG+GCISLEG++ T+KRPSGG+GGAGGNVYAIAD SLETLDS+LHHFNGQPG             K+ Y+RVPCGTLV EV  +E+ YG FHPW+LA GIECGG K   +G  G E   E     D Y G ++GE+GE   +R VADLEK G++VLLASGGKPGLGNL++ASRRVGTK+PGQRGESRHY+FELRTIADVGLVGYPNAGKSTLLGCIT+AKPKVAMYPFTTLTPVVGHVEYS
Sbjct:   56 KFVDKLRILASGGKGGDGCISLEGDNPTRKRPSGGSGGAGGNVYAIADGSLETLDSQLHHFNGQPGNAGGGSGKKGRTGKDAYIRVPCGTLVSEVVQEEEHYG-FHPWALAGGIECGGEKSIAQGAEGEEGGEESAFDGDIYWGGDNGEEGEEEEVRYVADLEKDGDKVLLASGGKPGLGNLHVASRRVGTKIPGQRGESRHYRFELRTIADVGLVGYPNAGKSTLLGCITSAKPKVAMYPFTTLTPVVGHVEYS 309          
BLAST of mRNA_H-elongata_contig6801.14424.1 vs. uniprot
Match: A0A6H5KQG3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQG3_9PHAE)

HSP 1 Score: 238 bits (606), Expect = 3.730e-74
Identity = 127/175 (72.57%), Postives = 145/175 (82.86%), Query Frame = 1
Query:  238 KNTYVRVPCGTLVFEVTAKEQAYGGFHPWSLAEGIECGGGKGEGEG--GTEDHREYGHRNDEYEGQE--DGEKGEMRSVADLEKHGERVLLASGGKPGLGNLNMASRRVGTKLPGQRGESRHYQFELRTIADVGLVGYPNAGKSTLLGCITAAKPKVAMYPFTTLTPVVGHVEYS 750
            K+ Y+RVPCGTLV EV  +E+ YG FHPW+LA GIECGG K   +G  G E   E     D Y G++  + E+ E+R VADLEK G++VLLASGGKPGLGNL++ASRRVGTK+PGQRGESRHY+FELRTIADVGLVGYPNAGKSTLLGCIT+AKPKVAMYPFTTLTPVVGHVEYS
Sbjct:   18 KDAYIRVPCGTLVSEVVQEEEKYG-FHPWALAGGIECGGKKSIAQGAEGEEGGEESAFDGDSYWGEDNHEEEEEEVRYVADLEKDGDKVLLASGGKPGLGNLHVASRRVGTKIPGQRGESRHYRFELRTIADVGLVGYPNAGKSTLLGCITSAKPKVAMYPFTTLTPVVGHVEYS 191          
BLAST of mRNA_H-elongata_contig6801.14424.1 vs. uniprot
Match: A0A0P1B492_PLAHL (Obg family gtpase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B492_PLAHL)

HSP 1 Score: 173 bits (439), Expect = 3.780e-48
Identity = 109/259 (42.08%), Postives = 138/259 (53.28%), Query Frame = 1
Query:    1 QFVDKVRIVANGGKGGNGCISLEGESATKKRPSGGTGGAGGNVYAIADNSLETLDSKLHHFNGQPGXXXXXXXXXXXXXKNTYVRVPCGTLVFEVTAKEQAYGGFHPWSLAEGIECGGGKGEGEGGTEDHREYGHRNDEYEGQEDGEKGEMRSVADLEKHGERVLLASGGKPGLGNLNMASRRVGT----------KLPGQRGESRHYQFELRTIADVGLVGYPNAGKSTLLGCITAAKPKVAMYPFTTLTPVVGHVEY 747
            +FVD++RI A GG GGNGC S   ES T+KRP+GG GGAGG+V   A++ ++ L +  HHF G+ G             K  YV+VPCGTLV  V   E+             ++ G                     EYE  +      M  VADL+K G   L A GGKPGLGN  +A +   +          K  G  G S++Y+ EL+TIADVGLVGYPNAGKSTLL  ++ A P +A YPFTTL P VG VE+
Sbjct:   85 RFVDRIRIKATGGHGGNGCASFVAESTTRKRPNGGHGGAGGDVIIEANDKVQNLANATHHFKGESGTNGMPNDSAGKRGKYCYVKVPCGTLVKRVERYERE------------MDTG---------------------EYEVVD-----RMEVVADLDKPGTTFLAAKGGKPGLGNRILAGKTTKSGRLRKLMPENKTRGSPGTSQYYELELKTIADVGLVGYPNAGKSTLLSVLSRATPAIAPYPFTTLHPYVGIVEF 305          
BLAST of mRNA_H-elongata_contig6801.14424.1 vs. uniprot
Match: A0A3R7ITC1_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7ITC1_9STRA)

HSP 1 Score: 174 bits (440), Expect = 4.720e-48
Identity = 108/259 (41.70%), Postives = 135/259 (52.12%), Query Frame = 1
Query:    1 QFVDKVRIVANGGKGGNGCISLEGESATKKRPSGGTGGAGGNVYAIADNSLETLDSKLHHFNGQPGXXXXXXXXXXXXXKNTYVRVPCGTLVFEVTAKEQAYGGFHPWSLAEGIECGGGKGEGEGGTEDHREYGHRNDEYEGQEDGEKGEMRSVADLEKHGERVLLASGGKPGLGNLNMASRRVG----------TKLPGQRGESRHYQFELRTIADVGLVGYPNAGKSTLLGCITAAKPKVAMYPFTTLTPVVGHVEY 747
            +FVD++R+ A GG GGNGC S   ESAT+KRP+GG  GAGG+V   A   ++ L +  HHF G  G             K+ YV+VPCGTLV  V   E+                                    N EYE  +     +M  V DL+K G   L A GGKPGLGN  +A +             TK  G  G S++Y+ EL+TIADVGLVGYPNAGKSTLL  ++ A P++A YPFTTL P VG VE+
Sbjct:  100 RFVDRIRVKATGGHGGNGCASFFSESATRKRPNGGXXGAGGDVVIEASGKMQNLANATHHFKGGAGLNGMSNDAAGRRGKHCYVKVPCGTLVKRVERYEREL---------------------------------ENGEYEIVD-----QMEVVCDLDKPGSTFLAAQGGKPGLGNRILAGKTTKFGRLRKHMPETKGTGHPGTSQYYELELKTIADVGLVGYPNAGKSTLLSVLSRATPEIAPYPFTTLHPYVGIVEF 320          
BLAST of mRNA_H-elongata_contig6801.14424.1 vs. uniprot
Match: A0A024FZD6_9STRA (Uncharacterized protein n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024FZD6_9STRA)

HSP 1 Score: 174 bits (441), Expect = 6.270e-48
Identity = 107/259 (41.31%), Postives = 137/259 (52.90%), Query Frame = 1
Query:    1 QFVDKVRIVANGGKGGNGCISLEGESATKKRPSGGTGGAGGNVYAIADNSLETLDSKLHHFNGQPGXXXXXXXXXXXXXKNTYVRVPCGTLVFEVTAKEQAYGGFHPWSLAEGIECGGGKGEGEGGTEDHREYGHRNDEYEGQEDGEKGEMRSVADLEKHGERVLLASGGKPGLGNLNMASRRV--GT--------KLPGQRGESRHYQFELRTIADVGLVGYPNAGKSTLLGCITAAKPKVAMYPFTTLTPVVGHVEY 747
            +FVD++RI   GG GGNGC S E + + +KRPSGG GGAGG V   AD++++ L S  HHF G+ G                  RVPCGT+V +V  +E    G   + + E +E                                     ++ DL++HG + + A GGKPGLGN  + SR    GT        K  GQ G S HY+ EL+TIADVGLVGYPNAGKSTLL  ++ A PK+A YPFTTL P VG VE+
Sbjct:  136 RFVDRIRIKVVGGYGGNGCCSFEAKKSFRKRPSGGHGGAGGAVIVQADSAVQDLASSTHHFKGERGQNGKPNAGAGRCGSACIFRVPCGTIVNKVI-RETIGTGCEDFDITERLE-------------------------------------NICDLDRHGNQFVAAEGGKPGLGNRVLLSRTTTFGTLRNKMDEGKNLGQPGTSHHYELELKTIADVGLVGYPNAGKSTLLSRLSRASPKIAPYPFTTLHPFVGIVEF 356          
BLAST of mRNA_H-elongata_contig6801.14424.1 vs. uniprot
Match: K3W6W2_GLOUD (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3W6W2_GLOUD)

HSP 1 Score: 172 bits (436), Expect = 2.590e-47
Identity = 108/259 (41.70%), Postives = 140/259 (54.05%), Query Frame = 1
Query:    1 QFVDKVRIVANGGKGGNGCISLEGESATKKRPSGGTGGAGGNVYAIADNSLETLDSKLHHFNGQPGXXXXXXXXXXXXXKNTYVRVPCGTLVFEVTAKEQAYGGFHPWSLAEGIECGGGKGEGEGGTEDHREYGHRNDEYEGQEDGEKGEMRSVADLEKHGERVLLASGGKPGLGNLNMASR-----RVGTKLP-----GQRGESRHYQFELRTIADVGLVGYPNAGKSTLLGCITAAKPKVAMYPFTTLTPVVGHVEY 747
            +FVD++RI A GG GGNGC S   ESA +KRP+GG GGAGGNV   AD+ ++ L +  HHF G  G             K+ +V+VPCGTLV  V   E+                                    N E+E  +     +M +V DL++ G   L A GGKPGLGN  +A +     R+   +P     G  G S++Y+ EL+TIADVGLVGYPNAGKSTLL  ++ A P++A YPFTTL P VG VE+
Sbjct:  119 RFVDRIRIKATGGHGGNGCASFFSESAMRKRPNGGHGGAGGNVVIEADDCIQNLANATHHFKGGAGLNGMPNDAAGRRGKHCFVKVPCGTLVKRVKRFEREL---------------------------------ENGEFEIVD-----KMETVCDLDQPGATFLAAIGGKPGLGNRILAGKTTNFGRLRKHMPDNKGVGSPGTSQYYELELKTIADVGLVGYPNAGKSTLLSTLSRATPEIAPYPFTTLHPYVGIVEF 339          
BLAST of mRNA_H-elongata_contig6801.14424.1 vs. uniprot
Match: F0W392_9STRA (GTPase putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W392_9STRA)

HSP 1 Score: 172 bits (435), Expect = 5.980e-47
Identity = 111/259 (42.86%), Postives = 139/259 (53.67%), Query Frame = 1
Query:    1 QFVDKVRIVANGGKGGNGCISLEGESATKKRPSGGTGGAGGNVYAIADNSLETLDSKLHHFNGQPGXXXXXXXXXXXXXKNTYVRVPCGTLVFEVTAKEQAYGGFHPWSLAEGIECGGGKGEGEGGTEDHREYGHRNDEYEGQEDGEKGEMRSVADLEKHGERVLLASGGKPGLGNLNMASRRV--GT--------KLPGQRGESRHYQFELRTIADVGLVGYPNAGKSTLLGCITAAKPKVAMYPFTTLTPVVGHVEY 747
            +FVD++RI A GG GGNGC S   +++  KRPSGG GGAGG V   AD++++ L S  HHF G  G                  RVPCGT+V +VT +E               ECG              ++    D +E         + S+ DL++HG + + A GGKPGLGN  + SR    GT        K  GQ G S HY+ EL+ IADVGLVGYPNAGKSTLL  ++ A PKVA YPFTTL P VG VE+
Sbjct:  149 RFVDRIRIKAAGGYGGNGCCSFNAKNSFTKRPSGGHGGAGGAVIIQADSAVQDLASSTHHFKGGSGQNGKPNEGAGRCGSACIFRVPCGTIVKKVTREEIE------------TECG--------------DF----DVFE--------RLESIYDLDRHGSQFVAAEGGKPGLGNRVLLSRTTTFGTLKNKMDEGKNIGQPGTSNHYELELKIIADVGLVGYPNAGKSTLLSRLSRASPKVAPYPFTTLHPFVGIVEF 369          
BLAST of mRNA_H-elongata_contig6801.14424.1 vs. uniprot
Match: G4YIK5_PHYSP (Uncharacterized protein n=17 Tax=Phytophthora TaxID=4783 RepID=G4YIK5_PHYSP)

HSP 1 Score: 163 bits (413), Expect = 2.480e-44
Identity = 104/259 (40.15%), Postives = 135/259 (52.12%), Query Frame = 1
Query:    1 QFVDKVRIVANGGKGGNGCISLEGESATKKRPSGGTGGAGGNVYAIADNSLETLDSKLHHFNGQPGXXXXXXXXXXXXXKNTYVRVPCGTLVFEVTAKEQAYGGFHPWSLAEGIECGGGKGEGEGGTEDHREYGHRNDEYEGQEDGEKGEMRSVADLEKHGERVLLASGGKPGLGNLNMASR-----RVGTKLP-----GQRGESRHYQFELRTIADVGLVGYPNAGKSTLLGCITAAKPKVAMYPFTTLTPVVGHVEY 747
            +FVD++R+ A GG GGNGC S   ESA +KRP+G    AGG+V   A + ++ L +  HHF G  G             K+  V+VPCGTLV  V   E+                                    N EYE  +     +M +V DL+K G   L A GGKPGLGN  +A +     R+   +P     G  G S++Y+ EL+TIADVGLVGYPNAGKSTLL  ++ A P++A YPFTTL P VG VE+
Sbjct:   74 RFVDRIRVKATGGHGGNGCASFFAESAMRKRPNGXXXXAGGDVVIEASDKMQNLANATHHFKGGAGTNGMPNDAAGRRGKHCVVKVPCGTLVKRVERYEREL---------------------------------ENGEYEIVD-----QMETVCDLDKPGATFLAAKGGKPGLGNRILAGKTTKFGRLRKHMPENKTTGHPGTSQYYELELKTIADVGLVGYPNAGKSTLLSVLSRATPEIAPYPFTTLHPYVGIVEF 294          
BLAST of mRNA_H-elongata_contig6801.14424.1 vs. uniprot
Match: A0A484DR68_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DR68_BRELC)

HSP 1 Score: 163 bits (412), Expect = 5.250e-44
Identity = 103/259 (39.77%), Postives = 134/259 (51.74%), Query Frame = 1
Query:    1 QFVDKVRIVANGGKGGNGCISLEGESATKKRPSGGTGGAGGNVYAIADNSLETLDSKLHHFNGQPGXXXXXXXXXXXXXKNTYVRVPCGTLVFEVTAKEQAYGGFHPWSLAEGIECGGGKGEGEGGTEDHREYGHRNDEYEGQEDGEKGEMRSVADLEKHGERVLLASGGKPGLGNLNMASRRV----------GTKLPGQRGESRHYQFELRTIADVGLVGYPNAGKSTLLGCITAAKPKVAMYPFTTLTPVVGHVEY 747
            +FVD++R+ A GG GGNGC S   ESAT+KRP+     AGG+V   A   ++ L +  HHF G  G             K+ +++VPCGTLV  V   E+                                  H + E+E  +     +M  VADL+K G   L ASGGKPGLGN  +A +              K  G  G S++Y+ EL+TIADVGLVGYPNAGKSTLL  ++ A P++A YPFTTL P VG VE+
Sbjct:   85 RFVDRIRVKATGGHGGNGCASFFSESATRKRPNXXXXXAGGDVVIEASAQMQNLANATHHFKGGSGTNGMPNDAAGRRGKHCFLKVPCGTLVKRVERYERE---------------------------------HESGEFEIVD-----KMEIVADLDKPGTTFLAASGGKPGLGNRILAGKTTMFGQLRKHMPENKTTGLPGTSQYYELELKTIADVGLVGYPNAGKSTLLSVLSCATPEIAPYPFTTLHPYVGIVEF 305          
BLAST of mRNA_H-elongata_contig6801.14424.1 vs. uniprot
Match: A0A3M6VI35_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VI35_9STRA)

HSP 1 Score: 159 bits (403), Expect = 1.070e-42
Identity = 102/259 (39.38%), Postives = 134/259 (51.74%), Query Frame = 1
Query:    1 QFVDKVRIVANGGKGGNGCISLEGESATKKRPSGGTGGAGGNVYAIADNSLETLDSKLHHFNGQPGXXXXXXXXXXXXXKNTYVRVPCGTLVFEVTAKEQAYGGFHPWSLAEGIECGGGKGEGEGGTEDHREYGHRNDEYEGQEDGEKGEMRSVADLEKHGERVLLASGGKPGLGNLNMASR-----RVGTKLP-----GQRGESRHYQFELRTIADVGLVGYPNAGKSTLLGCITAAKPKVAMYPFTTLTPVVGHVEY 747
            +FVD++R+ A GG GGNGC S   ESA +KRP+     AGG+V   A+  ++ L +  HHF    G             K+ +V+VPCGTL+  V   E+                                    N E+E  +      M  VADL+K G   L A GGKPGLGN  +A +     R+   +P     GQ G S++Y+ EL+TIADVGLVGYPNAGKSTLL  ++ A P++A YPFTTL P VG VE+
Sbjct:   92 RFVDRIRVKATGGHGGNGCASFFSESAVRKRPNXXXXXAGGDVVIEANEKMQNLGNATHHFRAGAGTNGMANDSAGKRGKHFHVKVPCGTLIKRVERYEREL---------------------------------ENGEFEIVD-----RMEVVADLDKPGATFLAAKGGKPGLGNRILAGKTTTFGRLRKHMPENKTTGQPGTSQYYELELKTIADVGLVGYPNAGKSTLLSVLSRATPEIAPYPFTTLHPYVGIVEF 312          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6801.14424.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4Q4_ECTSI2.970e-11571.76Mtg2, mitochondrial Obg/CtgA-like GTPase n=1 Tax=E... [more]
A0A6H5KQG3_9PHAE3.730e-7472.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A0P1B492_PLAHL3.780e-4842.08Obg family gtpase n=1 Tax=Plasmopara halstedii Tax... [more]
A0A3R7ITC1_9STRA4.720e-4841.70Uncharacterized protein n=4 Tax=Phytophthora kerno... [more]
A0A024FZD6_9STRA6.270e-4841.31Uncharacterized protein n=2 Tax=Albugo candida Tax... [more]
K3W6W2_GLOUD2.590e-4741.70Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4... [more]
F0W392_9STRA5.980e-4742.86GTPase putative n=1 Tax=Albugo laibachii Nc14 TaxI... [more]
G4YIK5_PHYSP2.480e-4440.15Uncharacterized protein n=17 Tax=Phytophthora TaxI... [more]
A0A484DR68_BRELC5.250e-4439.77Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A3M6VI35_9STRA1.070e-4239.38Uncharacterized protein n=1 Tax=Peronospora effusa... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig6801contigH-elongata_contig6801:7650..10560 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score350.9
Seed ortholog evalue4.9e-94
Seed eggNOG ortholog2880.D7G4Q4
Preferred nameMTG2
KEGG koko:K03979,ko:K10277,ko:K15334
GOsGO:0000166,GO:0000313,GO:0001882,GO:0001883,GO:0002181,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005759,GO:0005761,GO:0005840,GO:0006412,GO:0006417,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010608,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019222,GO:0019538,GO:0019866,GO:0019898,GO:0031090,GO:0031312,GO:0031314,GO:0031323,GO:0031326,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0032268,GO:0032543,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032991,GO:0034248,GO:0034641,GO:0034645,GO:0035639,GO:0036094,GO:0043021,GO:0043022,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043576,GO:0043603,GO:0043604,GO:0044057,GO:0044065,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0044877,GO:0050789,GO:0050794,GO:0051171,GO:0051239,GO:0051246,GO:0060255,GO:0065007,GO:0070013,GO:0070129,GO:0071704,GO:0080090,GO:0097159,GO:0097367,GO:0098798,GO:0140053,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904,GO:2000112
EggNOG free text desc.GTP-binding protein
EggNOG OGsCOG0536@1,KOG1489@2759
Ec32 ortholog descriptionMtg2, mitochondrial Obg/CtgA-like GTPase
Ec32 orthologEc-20_000780.1
EC1.14.11.27,2.1.1.202
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03009,ko03016,ko03036
Hectar predicted targeting categoryother localisation
Exons7
Model size750
Cds size750
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931072.7748744-CDS-H-elongata_contig6801:7649..77191622931072.7748744-CDS-H-elongata_contig6801:7649..7719Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6801 7650..7719 +
1691679686.5190349-CDS-H-elongata_contig6801:7649..77191691679686.5190349-CDS-H-elongata_contig6801:7649..7719Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6801 7650..7719 +
1622931072.7896476-CDS-H-elongata_contig6801:8188..83291622931072.7896476-CDS-H-elongata_contig6801:8188..8329Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6801 8189..8329 +
1691679686.5288653-CDS-H-elongata_contig6801:8188..83291691679686.5288653-CDS-H-elongata_contig6801:8188..8329Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6801 8189..8329 +
1622931072.8066692-CDS-H-elongata_contig6801:8544..86271622931072.8066692-CDS-H-elongata_contig6801:8544..8627Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6801 8545..8627 +
1691679686.5376532-CDS-H-elongata_contig6801:8544..86271691679686.5376532-CDS-H-elongata_contig6801:8544..8627Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6801 8545..8627 +
1622931072.8202896-CDS-H-elongata_contig6801:8779..88461622931072.8202896-CDS-H-elongata_contig6801:8779..8846Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6801 8780..8846 +
1691679686.5494933-CDS-H-elongata_contig6801:8779..88461691679686.5494933-CDS-H-elongata_contig6801:8779..8846Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6801 8780..8846 +
1622931072.83679-CDS-H-elongata_contig6801:8930..90131622931072.83679-CDS-H-elongata_contig6801:8930..9013Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6801 8931..9013 +
1691679686.567391-CDS-H-elongata_contig6801:8930..90131691679686.567391-CDS-H-elongata_contig6801:8930..9013Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6801 8931..9013 +
1622931072.851983-CDS-H-elongata_contig6801:9609..97231622931072.851983-CDS-H-elongata_contig6801:9609..9723Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6801 9610..9723 +
1691679686.5757377-CDS-H-elongata_contig6801:9609..97231691679686.5757377-CDS-H-elongata_contig6801:9609..9723Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6801 9610..9723 +
1622931072.863644-CDS-H-elongata_contig6801:10368..105601622931072.863644-CDS-H-elongata_contig6801:10368..10560Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6801 10369..10560 +
1691679686.5837977-CDS-H-elongata_contig6801:10368..105601691679686.5837977-CDS-H-elongata_contig6801:10368..10560Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6801 10369..10560 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig6801.14424.1prot_H-elongata_contig6801.14424.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig6801 7650..10560 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig6801.14424.1

>prot_H-elongata_contig6801.14424.1 ID=prot_H-elongata_contig6801.14424.1|Name=mRNA_H-elongata_contig6801.14424.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=250bp
QFVDKVRIVANGGKGGNGCISLEGESATKKRPSGGTGGAGGNVYAIADNS
LETLDSKLHHFNGQPGAPGGASGRKGRTGKNTYVRVPCGTLVFEVTAKEQ
AYGGFHPWSLAEGIECGGGKGEGEGGTEDHREYGHRNDEYEGQEDGEKGE
MRSVADLEKHGERVLLASGGKPGLGNLNMASRRVGTKLPGQRGESRHYQF
ELRTIADVGLVGYPNAGKSTLLGCITAAKPKVAMYPFTTLTPVVGHVEYS
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mRNA from alignment at H-elongata_contig6801:7650..10560+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig6801.14424.1 ID=mRNA_H-elongata_contig6801.14424.1|Name=mRNA_H-elongata_contig6801.14424.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2911bp|location=Sequence derived from alignment at H-elongata_contig6801:7650..10560+ (Himanthalia elongata Himel1 dioecious)
CAGTTTGTTGACAAGGTCCGCATCGTGGCGAACGGGGGCAAGGGCGGCAA CGGGTGTATCAGCCTAGAGGGTGAGATGAGTTTTAGCAGCGACCTCCAGT GCCCTGGTGGCGTGTTGAATGCCCCCTCGAACCACAGGCTACTCGCGATG CGATCGTTTTTTTCCACGCCGGTGGCACGGAAAAGGAGTGGGTGCGACCG TACCACGAAGCCTTTGGTACGTAAGGCCAGCCAGGACGTGTGACATCCTT TTCACCTTGTCAAATAGGATATGAACTCCATCGGTTGATGAGCACCGAAC AGCTCCGTGGCGAGGACGTTGGACTCGTCGGTCGCCTCCAAGTTGTCCTG GATTTTCGAAAGCCTTATGAAGACACTCTTTGTACACTCGGAGGTACCGC GGCTTTGTGCCCATTCACGCGCGCGTTTTGGTTTTGGTTTGCGAGTTTCT CCTACCTGTCACCCTTGAGAAAATTAGGGCCTAACAAATTGACCGCGGCT CCATCTCACACCCTGGGCAAAATGCGAAATGTTTTCCAGGGGAAAGCGCC ACGAAGAAGAGGCCGTCAGGAGGAACTGGAGGAGCAGGAGGGAACGTGTA CGCAATCGCGGACAACTCATTGGAAACCCTCGACTCTAAGCTGCACCACT TCAACGGCCAACCTGGGGCTCCGGGGGGAGGTTTGTTAGAGCAGTACGAT CCTTGACACGCGCGGACATCGTACTCTCAAGCGGAAGAGGATCCCGCCGC ACTCCCGGAAAGCCCGCCGCTGCTGCAGCGAAGGGAAATCAGATCAACCA TCGTACGTATGATTATTAATTGTGTATCCCACTCTAACGATTTTGATCCT TAACGCCTTTATGCCCCCTGCATTCCGTGGACGCCTTCGCCTCAGCATCT GGGAGGAAAGGACGAACCGGAAAGAACACGTACGTTCGAGTTCCGTGCGG AACGCTCGTCTTCGAGGTGACGGCGAAGGTAAGAGGCACTTACCCTTTCG CGGCCGAAGTATTATTCGGGAAGCCAACCATAACTTCTTAATAGTATTCT ACGGTGCAGCCTGGTCGACGAGAGCCCCGCACCCGCTGCGTTTTGTCGTG ATTATTATGACCCTCCCCTCCCCTCTTCAGGAGCAAGCGTACGGCGGCTT TCACCCGTGGTCATTGGCCGAAGGGATCGAGTGCGGCGGCGGCAAGGGTG AGGCTGCGCACGAGTCGTGGGAGCGAGACGAAGCGGGGGGGGTTGAGGAA TGGGGATTTGGCAGTGACAAAAGCGACGAAGGCGAGGGTGAGGGCGGGAC CGAAGACCATCGAGAGTATGGCCATCGGAACGACGAATACGAGGGTCAAG AAGATGGCGAGAAGGTGATGCTACAAGGCTTGACCGGCTGGCCGGTTTAT TTGGTTGATTAGGGTGTTGCGTTTGGCAACCATGATACCGGTATTCTCTT TTTTCTTTAAGTTATCAATTTTTGCAGATGAAATCATTCAAGGTTCTATG AATAGATTACCAGTACCACCTACTGCAACGCTTGCAAGTCCCGTCATAAC CTGAGGTTCAGCGTAGATAATCTAGCAACGCTGACGTATTTTTCAGTACC TCGACACCTCGTCAATCCAATCGTTGAACTCTCCTAATTCACATTCGCAC GATTTCCATCACATTTGTTTTAGAGATTCGAACTTCGGATTGCTGTAGAA CTGATGCAACTGACTGCGCAGGTTGCAACACCAGTTGAACCACCGGCGCG CGTTTTTTTATTACCTTGGTACTAGTTTATTAGCGCGTTATTACCTGTAT CTCGATGTCGTGTGCTTAGGGTTGGACGTTGTCTGGCGAAGTACCATCAA CGGTGCAAGCTTCGCAGGAGACGCCCGCGACTTGCCCGCTTACCCTATAA TAGCGCTCGTTATATCTTAGACTCTAAAGTTGTAGATTTTCGTTCGAACC TTCGCCACAGGGCGAAATGCGATCCGTGGCCGATCTGGAGAAGCATGGGG AGAGGGTGCTCCTCGCGTCCGGAGGAAAGCCTGGCTTGGGAAACCTAAAC ATGGCGTCTCGAAGAGTCGGGACAGTGAGTAGAAAAACGCAACACGTTTT CGGGAAGAGGGAGTGATAATTGTGACTACGCAGTCACAATTTAGTTTGTG ACTACAGGAAAAAATAGCAAATAACGTTAATTTTATGCAGAGTAAAATAG CCGTTTCTCTGAAACCTATATATACTGGCTGACCCAACCCGCCCCATACC CCTAAAACCCTAAACCACACACACACACCCATGGGACTCATGGGGCTATG AGAACCTTAATTTGATGGTGGAAACCCCGGGGATGAACCATTATATGTCC CCGTAGTCACAAACTAAATTGTGACTATGTAGTCACAATTAGTTTTTCTA ATAATAATTTCTCTTCGGGAAGAAGTTCCATGTAGCCATACACTAAAATA GAAACCCCTGCCGTAAAAATCCCGACGGGCCCCTAGCGAAAATGCGAAGC ATCCTCCAACAGCACCATGATGCTAACTAATAGTATAGTATCCACACTCC GACGTGGGAATGGGCGCGTGAACCTCTCCCAACGCACCATTCGCACACAT CTCCGCTCAAGTGACAACAACAGCCCAGTCATAATGTGCTGCCAAGATGC TCTTTTAAGTTGGGAACATCTTCTACTCCGCCGCCCCATTTTGGCGACTT TCTCCCTTTTTTATCGCAGAAACTCCCCGGGCAGCGAGGAGAGAGCCGAC ACTACCAGTTCGAGCTCCGCACTATCGCCGACGTGGGGTTAGTGGGCTAC CCCAACGCGGGGAAGTCTACCCTGTTGGGCTGCATTACGGCCGCCAAGCC CAAGGTGGCCATGTACCCCTTCACGACGCTCACGCCTGTCGTCGGCCACG TGGAGTACTCG
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Coding sequence (CDS) from alignment at H-elongata_contig6801:7650..10560+

>mRNA_H-elongata_contig6801.14424.1 ID=mRNA_H-elongata_contig6801.14424.1|Name=mRNA_H-elongata_contig6801.14424.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1500bp|location=Sequence derived from alignment at H-elongata_contig6801:7650..10560+ (Himanthalia elongata Himel1 dioecious)
CAGTTTGTTGACAAGGTCCGCATCGTGGCGAACGGGGGCAAGGGCGGCAA
CGGGTGTATCAGCCTAGAGGCAGTTTGTTGACAAGGTCCGCATCGTGGCG
AACGGGGGCAAGGGCGGCAACGGGTGTATCAGCCTAGAGGGGGAAAGCGC
CACGAAGAAGAGGCCGTCAGGAGGAACTGGAGGAGCAGGAGGGAACGTGT
ACGCAATCGCGGACAACTCATTGGAAACCCTCGACTCTAAGCTGCACCAC
TTCAACGGCCAACCTGGGGCTCCGGGGGGAGGGGAAAGCGCCACGAAGAA
GAGGCCGTCAGGAGGAACTGGAGGAGCAGGAGGGAACGTGTACGCAATCG
CGGACAACTCATTGGAAACCCTCGACTCTAAGCTGCACCACTTCAACGGC
CAACCTGGGGCTCCGGGGGGAGCATCTGGGAGGAAAGGACGAACCGGAAA
GAACACGTACGTTCGAGTTCCGTGCGGAACGCTCGTCTTCGAGGTGACGG
CGAAGCATCTGGGAGGAAAGGACGAACCGGAAAGAACACGTACGTTCGAG
TTCCGTGCGGAACGCTCGTCTTCGAGGTGACGGCGAAGGAGCAAGCGTAC
GGCGGCTTTCACCCGTGGTCATTGGCCGAAGGGATCGAGTGCGGCGGCGG
CAAGGGAGCAAGCGTACGGCGGCTTTCACCCGTGGTCATTGGCCGAAGGG
ATCGAGTGCGGCGGCGGCAAGGGCGAGGGTGAGGGCGGGACCGAAGACCA
TCGAGAGTATGGCCATCGGAACGACGAATACGAGGGTCAAGAAGATGGCG
AGAAGGCGAGGGTGAGGGCGGGACCGAAGACCATCGAGAGTATGGCCATC
GGAACGACGAATACGAGGGTCAAGAAGATGGCGAGAAGGGCGAAATGCGA
TCCGTGGCCGATCTGGAGAAGCATGGGGAGAGGGTGCTCCTCGCGTCCGG
AGGAAAGCCTGGCTTGGGAAACCTAAACATGGCGTCTCGAAGAGTCGGGA
CAGGCGAAATGCGATCCGTGGCCGATCTGGAGAAGCATGGGGAGAGGGTG
CTCCTCGCGTCCGGAGGAAAGCCTGGCTTGGGAAACCTAAACATGGCGTC
TCGAAGAGTCGGGACAAAACTCCCCGGGCAGCGAGGAGAGAGCCGACACT
ACCAGTTCGAGCTCCGCACTATCGCCGACGTGGGGTTAGTGGGCTACCCC
AACGCGGGGAAGTCTACCCTGTTGGGCTGCATTACGGCCGCCAAGCCCAA
GGTGGCCATGTACCCCTTCACGACGCTCACGCCTGTCGTCGGCCACGTGG
AGTACTCGAAACTCCCCGGGCAGCGAGGAGAGAGCCGACACTACCAGTTC
GAGCTCCGCACTATCGCCGACGTGGGGTTAGTGGGCTACCCCAACGCGGG
GAAGTCTACCCTGTTGGGCTGCATTACGGCCGCCAAGCCCAAGGTGGCCA
TGTACCCCTTCACGACGCTCACGCCTGTCGTCGGCCACGTGGAGTACTCG
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